RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 OPN3Q9H1Y3 402 aaPredicted RBP6.44□□□□□ -1.38
HDAC9-202ENST00000405010 GPR27Q9NS67 375 aa6.44□□□□□ -1.38
HDAC9-202ENST00000405010 CISD1Q9NZ45 108 aaKnown RBP6.44□□□□□ -1.38
HDAC9-202ENST00000405010 HS3ST3B1Q9Y662 390 aa6.44□□□□□ -1.38
HDAC9-202ENST00000405010 SPTY2D1-AS1A0A0U1RR47 76 aa6.44□□□□□ -1.38
HDAC9-202ENST00000405010 RRP8O43159 456 aaKnown RBP6.44□□□□□ -1.38
HDAC9-202ENST00000405010 AMBPP02760 352 aa6.44□□□□□ -1.38
HDAC9-202ENST00000405010 FGF5P12034 268 aa6.44□□□□□ -1.38
HDAC9-202ENST00000405010 EN2P19622 333 aaPredicted RBP6.44□□□□□ -1.38
HDAC9-202ENST00000405010 GALNSP34059 522 aa6.44□□□□□ -1.38
HDAC9-202ENST00000405010 APLNRP35414 380 aa6.44□□□□□ -1.38
HDAC9-202ENST00000405010 LSM6P62312 80 aaKnown RBP6.44□□□□□ -1.38
HDAC9-202ENST00000405010 LTC4SQ16873 150 aa6.44□□□□□ -1.38
HDAC9-202ENST00000405010 TMEM211Q6ICI0 200 aa6.44□□□□□ -1.38
HDAC9-202ENST00000405010 C9orf40Q8IXQ3 194 aa6.44□□□□□ -1.38
HDAC9-202ENST00000405010 OR10G8Q8NGN5 311 aa6.44□□□□□ -1.38
HDAC9-202ENST00000405010 MARS2Q96GW9 593 aaKnown RBP6.44□□□□□ -1.38
HDAC9-202ENST00000405010 RBKSQ9H477 322 aa6.44□□□□□ -1.38
HDAC9-202ENST00000405010 KCNIP2Q9NS61 270 aa6.44□□□□□ -1.38
HDAC9-202ENST00000405010 FBLN5Q9UBX5 448 aa6.44□□□□□ -1.38
HDAC9-202ENST00000405010 SCRG1O75711 98 aa6.43□□□□□ -1.38
HDAC9-202ENST00000405010 EDDM3BP56851 147 aa6.43□□□□□ -1.38
HDAC9-202ENST00000405010 LHFPL1Q86WI0 220 aa6.43□□□□□ -1.38
HDAC9-202ENST00000405010 CLDND2Q8NHS1 167 aa6.43□□□□□ -1.38
HDAC9-202ENST00000405010 TP53RKQ96S44 253 aa6.43□□□□□ -1.38
HDAC9-202ENST00000405010 MRPL37Q9BZE1 423 aaKnown RBP6.43□□□□□ -1.38
HDAC9-202ENST00000405010 AHCTF1Q8WYP5 2266 aa6.43□□□□□ -1.38
HDAC9-202ENST00000405010 IGKV1D-43A0A0B4J1Z2 117 aa6.43□□□□□ -1.38
HDAC9-202ENST00000405010 CTXND1A0A1B0GTU2 59 aa6.43□□□□□ -1.38
HDAC9-202ENST00000405010 TGFBR3LH3BV60 316 aa6.43□□□□□ -1.38
HDAC9-202ENST00000405010 TRAF3IP2O43734 574 aaPredicted RBP6.43□□□□□ -1.38
HDAC9-202ENST00000405010 CA11O75493 328 aa6.43□□□□□ -1.38
HDAC9-202ENST00000405010 NXPH2O95156 264 aa6.43□□□□□ -1.38
HDAC9-202ENST00000405010 CRYAAP02489 173 aa6.43□□□□□ -1.38
HDAC9-202ENST00000405010 PATE4P0C8F1 98 aa6.43□□□□□ -1.38
HDAC9-202ENST00000405010 EDN3P14138 238 aa6.43□□□□□ -1.38
HDAC9-202ENST00000405010 OTX2P32243 289 aa6.43□□□□□ -1.38
HDAC9-202ENST00000405010 PLGLB1Q02325 96 aa6.43□□□□□ -1.38
HDAC9-202ENST00000405010 RAB35Q15286 201 aa6.43□□□□□ -1.38
HDAC9-202ENST00000405010 RTN4RL2Q86UN3 420 aa6.43□□□□□ -1.38
HDAC9-202ENST00000405010 SHISA5Q8N114 240 aa6.43□□□□□ -1.38
HDAC9-202ENST00000405010 OR10G3Q8NGC4 313 aa6.43□□□□□ -1.38
HDAC9-202ENST00000405010 OR1K1Q8NGR3 316 aa6.43□□□□□ -1.38
HDAC9-202ENST00000405010 C10orf35Q96D05 121 aa6.43□□□□□ -1.38
HDAC9-202ENST00000405010 TMEM147Q9BVK8 224 aa6.43□□□□□ -1.38
HDAC9-202ENST00000405010 HIPK2Q9H2X6 1198 aa6.43□□□□□ -1.38
HDAC9-202ENST00000405010 MTCH1Q9NZJ7 389 aa6.43□□□□□ -1.38
HDAC9-202ENST00000405010 PTRH2Q9Y3E5 179 aaKnown RBP6.43□□□□□ -1.38
HDAC9-202ENST00000405010 A0A0A6YYD4 124 aa6.43□□□□□ -1.38
HDAC9-202ENST00000405010 ZNF732B4DXR9 585 aa6.43□□□□□ -1.38
HDAC9-202ENST00000405010 ATXN7O15265 892 aaPredicted RBP6.43□□□□□ -1.38
HDAC9-202ENST00000405010 LYL1P12980 280 aa6.43□□□□□ -1.38
HDAC9-202ENST00000405010 PLAURQ03405 335 aa6.43□□□□□ -1.38
HDAC9-202ENST00000405010 SMAD4Q13485 552 aaKnown RBP6.43□□□□□ -1.38
HDAC9-202ENST00000405010 OR8B8Q15620 311 aa6.43□□□□□ -1.38
HDAC9-202ENST00000405010 SYT13Q7L8C5 426 aa6.43□□□□□ -1.38
HDAC9-202ENST00000405010 OR4A16Q8NH70 328 aa6.43□□□□□ -1.38
HDAC9-202ENST00000405010 ZNF596Q8TC21 504 aa6.43□□□□□ -1.38
HDAC9-202ENST00000405010 MRGPRFQ96AM1 343 aa6.43□□□□□ -1.38
HDAC9-202ENST00000405010 ABHD14BQ96IU4 210 aa6.43□□□□□ -1.38
HDAC9-202ENST00000405010 CCDC74BQ96LY2 380 aa6.43□□□□□ -1.38
HDAC9-202ENST00000405010 GOLGB1Q14789 3259 aaKnown RBP6.43□□□□□ -1.38
HDAC9-202ENST00000405010 A0A1B0GU03 582 aa6.42□□□□□ -1.38
HDAC9-202ENST00000405010 LRRC3CA6NJW4 275 aa6.42□□□□□ -1.38
HDAC9-202ENST00000405010 H0Y8G0 127 aa6.42□□□□□ -1.38
HDAC9-202ENST00000405010 ZNF253O75346 499 aa6.42□□□□□ -1.38
HDAC9-202ENST00000405010 KBTBD11O94819 623 aa6.42□□□□□ -1.38
HDAC9-202ENST00000405010 HPRT1P00492 218 aa6.42□□□□□ -1.38
HDAC9-202ENST00000405010 ZNF32P17041 273 aa6.42□□□□□ -1.38
HDAC9-202ENST00000405010 COL9A1P20849 921 aa6.42□□□□□ -1.38
HDAC9-202ENST00000405010 IGFBP4P22692 258 aa6.42□□□□□ -1.38
HDAC9-202ENST00000405010 GPM6AP51674 278 aa6.42□□□□□ -1.38
HDAC9-202ENST00000405010 TGFBR3Q03167 851 aa6.42□□□□□ -1.38
HDAC9-202ENST00000405010 ZNF816Q0VGE8 651 aaPredicted RBP6.42□□□□□ -1.38
HDAC9-202ENST00000405010 RHBDD1Q8TEB9 315 aa6.42□□□□□ -1.38
HDAC9-202ENST00000405010 RCC1LQ96I51 464 aaKnown RBP6.42□□□□□ -1.38
HDAC9-202ENST00000405010 Q96M66 194 aa6.42□□□□□ -1.38
HDAC9-202ENST00000405010 LRRC61Q9BV99 259 aa6.42□□□□□ -1.38
HDAC9-202ENST00000405010 FAM234AQ9H0X4 552 aa6.42□□□□□ -1.38
HDAC9-202ENST00000405010 SDF2L1Q9HCN8 221 aa6.42□□□□□ -1.38
HDAC9-202ENST00000405010 DIRC3C9JPN6 131 aa6.42□□□□□ -1.38
HDAC9-202ENST00000405010 SIRPB1O00241 398 aa6.42□□□□□ -1.38
HDAC9-202ENST00000405010 TSPAN2O60636 221 aa6.42□□□□□ -1.38
HDAC9-202ENST00000405010 CBR3O75828 277 aa6.42□□□□□ -1.38
HDAC9-202ENST00000405010 TOX4O94842 621 aa6.42□□□□□ -1.38
HDAC9-202ENST00000405010 SRP14P37108 136 aaKnown RBP6.42□□□□□ -1.38
HDAC9-202ENST00000405010 PAFAH1B2P68402 229 aa6.42□□□□□ -1.38
HDAC9-202ENST00000405010 EIF3IQ13347 325 aaKnown RBP6.42□□□□□ -1.38
HDAC9-202ENST00000405010 SHHQ15465 462 aa6.42□□□□□ -1.38
HDAC9-202ENST00000405010 PRAMEF5Q5TYX0 476 aa6.42□□□□□ -1.38
HDAC9-202ENST00000405010 PRAMEF6Q5VXH4 476 aa6.42□□□□□ -1.38
HDAC9-202ENST00000405010 ZDHHC23Q8IYP9 409 aa6.42□□□□□ -1.38
HDAC9-202ENST00000405010 BEND2Q8NDZ0 799 aa6.42□□□□□ -1.38
HDAC9-202ENST00000405010 ZNF721Q8TF20 911 aa6.42□□□□□ -1.38
HDAC9-202ENST00000405010 PARLQ9H300 379 aa6.42□□□□□ -1.38
HDAC9-202ENST00000405010 DENND4AQ7Z401 1863 aa6.42□□□□□ -1.38
HDAC9-202ENST00000405010 FANCMQ8IYD8 2048 aa6.42□□□□□ -1.38
HDAC9-202ENST00000405010 HELZP42694 1942 aaKnown RBP6.42□□□□□ -1.38
HDAC9-202ENST00000405010 A0A0U1RQV5 110 aa6.42□□□□□ -1.38
HDAC9-202ENST00000405010 LILRA5A6NI73 299 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms