RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 TUSC5Q8IXB3 177 aa10.25□□□□□ -0.77
RBM39-206ENST00000403542 COMMD1Q8N668 190 aa10.25□□□□□ -0.77
RBM39-206ENST00000403542 INTS12Q96CB8 462 aaKnown RBP10.25□□□□□ -0.77
RBM39-206ENST00000403542 MUCL1Q96DR8 90 aa10.25□□□□□ -0.77
RBM39-206ENST00000403542 TMPRSS5Q9H3S3 457 aa10.25□□□□□ -0.77
RBM39-206ENST00000403542 ZNF665Q9H7R5 613 aa10.25□□□□□ -0.77
RBM39-206ENST00000403542 SEBOXQ9HB31 216 aaPredicted RBP10.25□□□□□ -0.77
RBM39-206ENST00000403542 OR1A1Q9P1Q5 309 aa10.25□□□□□ -0.77
RBM39-206ENST00000403542 MED13Q9UHV7 2174 aa10.25□□□□□ -0.77
RBM39-206ENST00000403542 SIT1Q9Y3P8 196 aa10.25□□□□□ -0.77
RBM39-206ENST00000403542 LOC102723996A0A087X1L8 192 aa10.25□□□□□ -0.77
RBM39-206ENST00000403542 LRRC3CA6NJW4 275 aa10.25□□□□□ -0.77
RBM39-206ENST00000403542 GJE1A6NN92 205 aa10.25□□□□□ -0.77
RBM39-206ENST00000403542 PDGFBP01127 241 aaPredicted RBP10.25□□□□□ -0.77
RBM39-206ENST00000403542 SRP19P09132 144 aaKnown RBP10.25□□□□□ -0.77
RBM39-206ENST00000403542 UCP2P55851 309 aa10.25□□□□□ -0.77
RBM39-206ENST00000403542 S100A12P80511 92 aa10.25□□□□□ -0.77
RBM39-206ENST00000403542 Q6ZRM9 215 aa10.25□□□□□ -0.77
RBM39-206ENST00000403542 SIGLEC12Q96PQ1 595 aa10.25□□□□□ -0.77
RBM39-206ENST00000403542 Q9N2K0 584 aa10.25□□□□□ -0.77
RBM39-206ENST00000403542 TRAPPC2LH3BP13 241 aa10.24□□□□□ -0.77
RBM39-206ENST00000403542 PITX3O75364 302 aa10.24□□□□□ -0.77
RBM39-206ENST00000403542 SCAF4O95104 1147 aaKnown RBP10.24□□□□□ -0.77
RBM39-206ENST00000403542 CDS2O95674 445 aa10.24□□□□□ -0.77
RBM39-206ENST00000403542 SERPINE2P07093 398 aa10.24□□□□□ -0.77
RBM39-206ENST00000403542 MMP9P14780 707 aa10.24□□□□□ -0.77
RBM39-206ENST00000403542 OR8B8Q15620 311 aa10.24□□□□□ -0.77
RBM39-206ENST00000403542 PYY3Q5JQD4 70 aa10.24□□□□□ -0.77
RBM39-206ENST00000403542 FAM53AQ6NSI3 398 aaPredicted RBP10.24□□□□□ -0.77
RBM39-206ENST00000403542 ASCL4Q6XD76 172 aa10.24□□□□□ -0.77
RBM39-206ENST00000403542 OR10D4PQ8NGN7 298 aa10.24□□□□□ -0.77
RBM39-206ENST00000403542 NIPSNAP3BQ9BS92 247 aa10.24□□□□□ -0.77
RBM39-206ENST00000403542 GPR61Q9BZJ8 451 aa10.24□□□□□ -0.77
RBM39-206ENST00000403542 TOLLIPQ9H0E2 274 aa10.24□□□□□ -0.77
RBM39-206ENST00000403542 TAAR3PQ9P1P4 343 aa10.24□□□□□ -0.77
RBM39-206ENST00000403542 PGLYRP1O75594 196 aaPredicted RBP10.24□□□□□ -0.77
RBM39-206ENST00000403542 RHBDL1O75783 438 aa10.24□□□□□ -0.77
RBM39-206ENST00000403542 MMP7P09237 267 aaPredicted RBP10.24□□□□□ -0.77
RBM39-206ENST00000403542 FGF5P12034 268 aa10.24□□□□□ -0.77
RBM39-206ENST00000403542 PAX6P26367 422 aa10.24□□□□□ -0.77
RBM39-206ENST00000403542 SRD5A2P31213 254 aa10.24□□□□□ -0.77
RBM39-206ENST00000403542 RAB2AP61019 212 aa10.24□□□□□ -0.77
RBM39-206ENST00000403542 ELOBQ15370 118 aa10.24□□□□□ -0.77
RBM39-206ENST00000403542 ZNF880Q6PDB4 577 aa10.24□□□□□ -0.77
RBM39-206ENST00000403542 Q6ZSR3 168 aa10.24□□□□□ -0.77
RBM39-206ENST00000403542 WDR5BQ86VZ2 330 aa10.24□□□□□ -0.77
RBM39-206ENST00000403542 NECAP1Q8NC96 275 aa10.24□□□□□ -0.77
RBM39-206ENST00000403542 PLPPR1Q8TBJ4 325 aa10.24□□□□□ -0.77
RBM39-206ENST00000403542 SLC25A31Q9H0C2 315 aa10.24□□□□□ -0.77
RBM39-206ENST00000403542 C12orf49Q9H741 205 aa10.24□□□□□ -0.77
RBM39-206ENST00000403542 WDR54Q9H977 334 aa10.24□□□□□ -0.77
RBM39-206ENST00000403542 KCNS2Q9ULS6 477 aa10.24□□□□□ -0.77
RBM39-206ENST00000403542 CACNA1GO43497 2377 aa10.24□□□□□ -0.77
RBM39-206ENST00000403542 PPIHO43447 177 aaKnown RBP10.24□□□□□ -0.77
RBM39-206ENST00000403542 WDR1O75083 606 aa10.24□□□□□ -0.77
RBM39-206ENST00000403542 PAX9P55771 341 aa10.24□□□□□ -0.77
RBM39-206ENST00000403542 STARD6P59095 220 aa10.24□□□□□ -0.77
RBM39-206ENST00000403542 HIKESHIQ53FT3 197 aa10.24□□□□□ -0.77
RBM39-206ENST00000403542 BEND4Q6ZU67 534 aa10.24□□□□□ -0.77
RBM39-206ENST00000403542 SSX7Q7RTT5 188 aa10.24□□□□□ -0.77
RBM39-206ENST00000403542 RHOVQ96L33 236 aa10.24□□□□□ -0.77
RBM39-206ENST00000403542 SSX3Q99909 188 aa10.24□□□□□ -0.77
RBM39-206ENST00000403542 SF3B5Q9BWJ5 86 aaKnown RBP10.24□□□□□ -0.77
RBM39-206ENST00000403542 TUBA4BQ9H853 241 aa10.24□□□□□ -0.77
RBM39-206ENST00000403542 PLA2G3Q9NZ20 509 aa10.24□□□□□ -0.77
RBM39-206ENST00000403542 VDAC1P21796 283 aa10.23□□□□□ -0.77
RBM39-206ENST00000403542 UCP3P55916 312 aa10.23□□□□□ -0.77
RBM39-206ENST00000403542 IL11RAQ14626 422 aa10.23□□□□□ -0.77
RBM39-206ENST00000403542 NMSQ5H8A3 153 aa10.23□□□□□ -0.77
RBM39-206ENST00000403542 LFNGQ8NES3 379 aa10.23□□□□□ -0.77
RBM39-206ENST00000403542 GPR146Q96CH1 333 aa10.23□□□□□ -0.77
RBM39-206ENST00000403542 SPIN2AQ99865 258 aa10.23□□□□□ -0.77
RBM39-206ENST00000403542 SPIN2BQ9BPZ2 258 aa10.23□□□□□ -0.77
RBM39-206ENST00000403542 OR51M1Q9H341 326 aa10.23□□□□□ -0.77
RBM39-206ENST00000403542 SH2D2AQ9NP31 389 aa10.23□□□□□ -0.77
RBM39-206ENST00000403542 RPRMQ9NS64 109 aa10.23□□□□□ -0.77
RBM39-206ENST00000403542 CACNG5Q9UF02 275 aa10.23□□□□□ -0.77
RBM39-206ENST00000403542 DMXL2Q8TDJ6 3036 aa10.23□□□□□ -0.77
RBM39-206ENST00000403542 DEFA4P12838 97 aa10.23□□□□□ -0.77
RBM39-206ENST00000403542 BMP5P22003 454 aa10.23□□□□□ -0.77
RBM39-206ENST00000403542 CA6P23280 308 aa10.23□□□□□ -0.77
RBM39-206ENST00000403542 LMO1P25800 156 aa10.23□□□□□ -0.77
RBM39-206ENST00000403542 PCBD1P61457 104 aa10.23□□□□□ -0.77
RBM39-206ENST00000403542 ARL16Q0P5N6 197 aa10.23□□□□□ -0.77
RBM39-206ENST00000403542 EIF3IQ13347 325 aaKnown RBP10.23□□□□□ -0.77
RBM39-206ENST00000403542 OR2T2Q6IF00 324 aa10.23□□□□□ -0.77
RBM39-206ENST00000403542 M1APQ8TC57 530 aa10.23□□□□□ -0.77
RBM39-206ENST00000403542 PSMF1Q92530 271 aa10.23□□□□□ -0.77
RBM39-206ENST00000403542 TMEM56Q96MV1 263 aa10.23□□□□□ -0.77
RBM39-206ENST00000403542 PFDN5Q99471 154 aa10.23□□□□□ -0.77
RBM39-206ENST00000403542 C11orf1Q9H5F2 150 aa10.23□□□□□ -0.77
RBM39-206ENST00000403542 TMEM56-RWDD3S4R434 201 aa10.23□□□□□ -0.77
RBM39-206ENST00000403542 GVINP1Q7Z2Y8 2422 aa10.22□□□□□ -0.77
RBM39-206ENST00000403542 SIRPB1O00241 398 aa10.22□□□□□ -0.77
RBM39-206ENST00000403542 SPANXN5Q5MJ07 72 aa10.22□□□□□ -0.77
RBM39-206ENST00000403542 OR8G2PQ6IF36 304 aa10.22□□□□□ -0.77
RBM39-206ENST00000403542 LINC00696Q6ZRV3 163 aa10.22□□□□□ -0.77
RBM39-206ENST00000403542 STX12Q86Y82 276 aa10.22□□□□□ -0.77
RBM39-206ENST00000403542 MKXQ8IYA7 352 aa10.22□□□□□ -0.77
RBM39-206ENST00000403542 ZDHHC23Q8IYP9 409 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms