RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 SMIM12Q96EX1 92 aa2□□□□□ -2.09
HMGB1P17-201ENST00000403495 YPEL4Q96NS1 127 aa2□□□□□ -2.09
HMGB1P17-201ENST00000403495 TSGA10Q9BZW7 698 aa2□□□□□ -2.09
HMGB1P17-201ENST00000403495 METTL9Q9H1A3 318 aa2□□□□□ -2.09
HMGB1P17-201ENST00000403495 OR51E2Q9H255 320 aa2□□□□□ -2.09
HMGB1P17-201ENST00000403495 TRIM45Q9H8W5 580 aaPredicted RBP2□□□□□ -2.09
HMGB1P17-201ENST00000403495 INIPQ9NRY2 104 aa2□□□□□ -2.09
HMGB1P17-201ENST00000403495 DMAC2Q9NW81 257 aa2□□□□□ -2.09
HMGB1P17-201ENST00000403495 POLR3HQ9Y535 204 aaPredicted RBP2□□□□□ -2.09
HMGB1P17-201ENST00000403495 ICOSQ9Y6W8 199 aa2□□□□□ -2.09
HMGB1P17-201ENST00000403495 SEC16AO15027 2179 aa2□□□□□ -2.09
HMGB1P17-201ENST00000403495 SIGLEC1Q9BZZ2 1709 aa2□□□□□ -2.09
HMGB1P17-201ENST00000403495 RAB3GAP2Q9H2M9 1393 aa1.99□□□□□ -2.09
HMGB1P17-201ENST00000403495 A0A1W2PNN7 141 aa1.99□□□□□ -2.09
HMGB1P17-201ENST00000403495 MYBPHLA2RUH7 354 aa1.99□□□□□ -2.09
HMGB1P17-201ENST00000403495 IGLL5B9A064 214 aa1.99□□□□□ -2.09
HMGB1P17-201ENST00000403495 F5H768 121 aa1.99□□□□□ -2.09
HMGB1P17-201ENST00000403495 K7EPK0 472 aa1.99□□□□□ -2.09
HMGB1P17-201ENST00000403495 SLC16A4O15374 487 aa1.99□□□□□ -2.09
HMGB1P17-201ENST00000403495 BIRC5O15392 142 aa1.99□□□□□ -2.09
HMGB1P17-201ENST00000403495 SLC37A4O43826 429 aa1.99□□□□□ -2.09
HMGB1P17-201ENST00000403495 ASS1P00966 412 aaKnown RBP1.99□□□□□ -2.09
HMGB1P17-201ENST00000403495 IGKV1D-33P01593 117 aa1.99□□□□□ -2.09
HMGB1P17-201ENST00000403495 IGKV1-33P01594 117 aa1.99□□□□□ -2.09
HMGB1P17-201ENST00000403495 SCGB1C2P0DMR2 95 aa1.99□□□□□ -2.09
HMGB1P17-201ENST00000403495 PRPS1L1P21108 318 aa1.99□□□□□ -2.09
HMGB1P17-201ENST00000403495 PYCR1P32322 319 aa1.99□□□□□ -2.09
HMGB1P17-201ENST00000403495 ACTR1BP42025 376 aa1.99□□□□□ -2.09
HMGB1P17-201ENST00000403495 MRPS15P82914 257 aaKnown RBP1.99□□□□□ -2.09
HMGB1P17-201ENST00000403495 FAM3AP98173 230 aa1.99□□□□□ -2.09
HMGB1P17-201ENST00000403495 CLEC12BQ2HXU8 276 aa1.99□□□□□ -2.09
HMGB1P17-201ENST00000403495 TTMPQ5BVD1 217 aa1.99□□□□□ -2.09
HMGB1P17-201ENST00000403495 GLYATQ6IB77 296 aa1.99□□□□□ -2.09
HMGB1P17-201ENST00000403495 TTC33Q6PID6 262 aaPredicted RBP1.99□□□□□ -2.09
HMGB1P17-201ENST00000403495 LYPD1Q8N2G4 141 aa1.99□□□□□ -2.09
HMGB1P17-201ENST00000403495 OR2M3Q8NG83 312 aa1.99□□□□□ -2.09
HMGB1P17-201ENST00000403495 OR4P4Q8NGL7 312 aa1.99□□□□□ -2.09
HMGB1P17-201ENST00000403495 STOML3Q8TAV4 291 aa1.99□□□□□ -2.09
HMGB1P17-201ENST00000403495 SCGB1C1Q8TD33 95 aa1.99□□□□□ -2.09
HMGB1P17-201ENST00000403495 OR2V2Q96R30 315 aa1.99□□□□□ -2.09
HMGB1P17-201ENST00000403495 PARD6GQ9BYG4 376 aaPredicted RBP1.99□□□□□ -2.09
HMGB1P17-201ENST00000403495 ARL6Q9H0F7 186 aa1.99□□□□□ -2.09
HMGB1P17-201ENST00000403495 ZNF586Q9NXT0 402 aa1.99□□□□□ -2.09
HMGB1P17-201ENST00000403495 ZNF230Q9UIE0 474 aaPredicted RBP1.99□□□□□ -2.09
HMGB1P17-201ENST00000403495 MTCH2Q9Y6C9 303 aa1.99□□□□□ -2.09
HMGB1P17-201ENST00000403495 R4GN34 69 aa1.99□□□□□ -2.09
HMGB1P17-201ENST00000403495 THADAQ6YHU6 1953 aa1.99□□□□□ -2.09
HMGB1P17-201ENST00000403495 BRD4O60885 1362 aaPredicted RBP1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 MAP3K5Q99683 1374 aa1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 IGHV2-26A0A0B4J1V2 119 aa1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 A0A0B4J2C4 111 aa1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 SMIM23A6NLE4 172 aa1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 ZNF729A6NN14 1252 aaPredicted RBP1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 H0Y980 276 aa1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 M0QZ92 97 aa1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 SSNA1O43805 119 aa1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 CA2P00918 260 aa1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 IGHMP01871 453 aa1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 INAFM2P0DMQ5 153 aa1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 CGB3P0DN86 165 aa1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 CGB7P0DN87 165 aa1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 HRES1P13985 223 aa1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 ELK4P28324 431 aa1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 NUDT2P50583 147 aa1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 ZNF235Q14590 738 aa1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 RGS21Q2M5E4 152 aa1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 HLA-DRB5Q30154 266 aa1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 OGFRL1Q5TC84 451 aaPredicted RBP1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 LAIR2Q6ISS4 152 aa1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 DNM1P34Q6PK57 102 aa1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 XKRXQ6PP77 449 aa1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 OLIG3Q7RTU3 272 aa1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 AMN1Q8IY45 258 aa1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 MUC15Q8N387 334 aa1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 RIBC1Q8N443 379 aaPredicted RBP1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 OR52E4Q8NGH9 312 aa1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 DTD1Q8TEA8 209 aa1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 RNF133Q8WVZ7 376 aa1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 PPP1R14BQ96C90 147 aa1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 KCTD7Q96MP8 289 aa1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 TMEM208Q9BTX3 173 aa1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 GABARAPL1Q9H0R8 117 aa1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 TXNIPQ9H3M7 391 aa1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 FGFR1OP2Q9NVK5 253 aa1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 FAM206AQ9NX38 181 aa1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 C14orf166Q9Y224 244 aaKnown RBP1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 BAZ1BQ9UIG0 1483 aaKnown RBP1.98□□□□□ -2.09
HMGB1P17-201ENST00000403495 PLXNB3Q9ULL4 1909 aa1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 DYSFO75923 2080 aa1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 TINCRA0A1B0GVN0 87 aa1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 A6NED7 52 aa1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 METTL15A6NJ78 407 aa1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 A8MWP4 228 aa1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 C8orf87E5RJ46 101 aa1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 LRRN3E7EW58 273 aa1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 F5H5P2 479 aa1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 PFDN6O15212 129 aa1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 STX10O60499 249 aa1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 ADORA1P30542 326 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms