RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 H0YHG0 523 aa11.9□□□□□ -0.5
SMIM11A-203ENST00000399299 WIPF1O43516 503 aa11.9□□□□□ -0.5
SMIM11A-203ENST00000399299 ORC5O43913 435 aa11.9□□□□□ -0.5
SMIM11A-203ENST00000399299 OR2F2O95006 317 aa11.9□□□□□ -0.5
SMIM11A-203ENST00000399299 BLCAPP62952 87 aa11.9□□□□□ -0.5
SMIM11A-203ENST00000399299 MADCAM1Q13477 382 aa11.9□□□□□ -0.5
SMIM11A-203ENST00000399299 GPR50Q13585 617 aa11.9□□□□□ -0.5
SMIM11A-203ENST00000399299 IRF3Q14653 427 aa11.9□□□□□ -0.5
SMIM11A-203ENST00000399299 ACSM3Q53FZ2 586 aa11.9□□□□□ -0.5
SMIM11A-203ENST00000399299 GAPTQ8N292 157 aa11.9□□□□□ -0.5
SMIM11A-203ENST00000399299 RFESDQ8TAC1 157 aa11.9□□□□□ -0.5
SMIM11A-203ENST00000399299 NEK7Q8TDX7 302 aa11.9□□□□□ -0.5
SMIM11A-203ENST00000399299 CAPSLQ8WWF8 208 aa11.9□□□□□ -0.5
SMIM11A-203ENST00000399299 PHYHIPQ92561 330 aa11.9□□□□□ -0.5
SMIM11A-203ENST00000399299 TOMM40LQ969M1 308 aa11.9□□□□□ -0.5
SMIM11A-203ENST00000399299 RPEQ96AT9 228 aa11.9□□□□□ -0.5
SMIM11A-203ENST00000399299 RBM14Q96PK6 669 aaKnown RBP11.9□□□□□ -0.5
SMIM11A-203ENST00000399299 OR5M11Q96RB7 305 aa11.9□□□□□ -0.5
SMIM11A-203ENST00000399299 SLC25A33Q9BSK2 321 aa11.9□□□□□ -0.5
SMIM11A-203ENST00000399299 VCX3BQ9H321 246 aa11.9□□□□□ -0.5
SMIM11A-203ENST00000399299 DUSP21Q9H596 190 aa11.9□□□□□ -0.5
SMIM11A-203ENST00000399299 TRAV39A0A0B4J263 110 aa11.89□□□□□ -0.51
SMIM11A-203ENST00000399299 FAM90A9PA6NNJ1 464 aa11.89□□□□□ -0.51
SMIM11A-203ENST00000399299 MCRIP1C9JLW8 97 aa11.89□□□□□ -0.51
SMIM11A-203ENST00000399299 C15orf65H3BRN8 121 aa11.89□□□□□ -0.51
SMIM11A-203ENST00000399299 M0QZK8 103 aa11.89□□□□□ -0.51
SMIM11A-203ENST00000399299 FBXO24O75426 580 aa11.89□□□□□ -0.51
SMIM11A-203ENST00000399299 CA11O75493 328 aa11.89□□□□□ -0.51
SMIM11A-203ENST00000399299 SC5DO75845 299 aa11.89□□□□□ -0.51
SMIM11A-203ENST00000399299 MT-ND4P03905 459 aa11.89□□□□□ -0.51
SMIM11A-203ENST00000399299 GLAP06280 429 aa11.89□□□□□ -0.51
SMIM11A-203ENST00000399299 MGMTP16455 207 aa11.89□□□□□ -0.51
SMIM11A-203ENST00000399299 CD24P25063 80 aa11.89□□□□□ -0.51
SMIM11A-203ENST00000399299 VDAC2P45880 294 aaPredicted RBP11.89□□□□□ -0.51
SMIM11A-203ENST00000399299 RAB7AP51149 207 aa11.89□□□□□ -0.51
SMIM11A-203ENST00000399299 Q3ZCU0 254 aa11.89□□□□□ -0.51
SMIM11A-203ENST00000399299 ARSJQ5FYB0 599 aaPredicted RBP11.89□□□□□ -0.51
SMIM11A-203ENST00000399299 Q6ZS46 218 aa11.89□□□□□ -0.51
SMIM11A-203ENST00000399299 THNSL2Q86YJ6 484 aa11.89□□□□□ -0.51
SMIM11A-203ENST00000399299 OR8H3Q8N146 312 aa11.89□□□□□ -0.51
SMIM11A-203ENST00000399299 C8orf31Q8N9H6 132 aa11.89□□□□□ -0.51
SMIM11A-203ENST00000399299 TMEM104Q8NE00 496 aa11.89□□□□□ -0.51
SMIM11A-203ENST00000399299 LEAP2Q969E1 77 aa11.89□□□□□ -0.51
SMIM11A-203ENST00000399299 Q96M66 194 aa11.89□□□□□ -0.51
SMIM11A-203ENST00000399299 OCSTAMPQ9BR26 566 aa11.89□□□□□ -0.51
SMIM11A-203ENST00000399299 RAB9BQ9NP90 201 aa11.89□□□□□ -0.51
SMIM11A-203ENST00000399299 A0A1W2PPI3 338 aa11.88□□□□□ -0.51
SMIM11A-203ENST00000399299 AIPO00170 330 aa11.88□□□□□ -0.51
SMIM11A-203ENST00000399299 PEX14O75381 377 aa11.88□□□□□ -0.51
SMIM11A-203ENST00000399299 CRTAPO75718 401 aaPredicted RBP11.88□□□□□ -0.51
SMIM11A-203ENST00000399299 IGHV3-7P01780 117 aa11.88□□□□□ -0.51
SMIM11A-203ENST00000399299 UBBP0CG47 229 aa11.88□□□□□ -0.51
SMIM11A-203ENST00000399299 HSPA13P48723 471 aa11.88□□□□□ -0.51
SMIM11A-203ENST00000399299 GP2P55259 537 aaKnown RBP11.88□□□□□ -0.51
SMIM11A-203ENST00000399299 INSL4Q14641 139 aa11.88□□□□□ -0.51
SMIM11A-203ENST00000399299 MED22Q15528 200 aa11.88□□□□□ -0.51
SMIM11A-203ENST00000399299 LTC4SQ16873 150 aa11.88□□□□□ -0.51
SMIM11A-203ENST00000399299 TMEM30BQ3MIR4 351 aa11.88□□□□□ -0.51
SMIM11A-203ENST00000399299 RAB12Q6IQ22 244 aa11.88□□□□□ -0.51
SMIM11A-203ENST00000399299 LINC00311Q8N616 119 aa11.88□□□□□ -0.51
SMIM11A-203ENST00000399299 C11orf44Q8N8P7 122 aa11.88□□□□□ -0.51
SMIM11A-203ENST00000399299 OR10X1Q8NGY0 326 aa11.88□□□□□ -0.51
SMIM11A-203ENST00000399299 SGCDQ92629 289 aa11.88□□□□□ -0.51
SMIM11A-203ENST00000399299 ARL11Q969Q4 196 aa11.88□□□□□ -0.51
SMIM11A-203ENST00000399299 TMED9Q9BVK6 235 aa11.88□□□□□ -0.51
SMIM11A-203ENST00000399299 SELENOIQ9C0D9 397 aa11.88□□□□□ -0.51
SMIM11A-203ENST00000399299 CST11Q9H112 138 aa11.88□□□□□ -0.51
SMIM11A-203ENST00000399299 BANF2Q9H503 90 aa11.88□□□□□ -0.51
SMIM11A-203ENST00000399299 TGP01266 2768 aa11.87□□□□□ -0.51
SMIM11A-203ENST00000399299 KCNAB3O43448 404 aa11.87□□□□□ -0.51
SMIM11A-203ENST00000399299 RGS10O43665 173 aa11.87□□□□□ -0.51
SMIM11A-203ENST00000399299 FAM106CPP0CH98 169 aa11.87□□□□□ -0.51
SMIM11A-203ENST00000399299 CD37P11049 281 aa11.87□□□□□ -0.51
SMIM11A-203ENST00000399299 FUT3P21217 361 aa11.87□□□□□ -0.51
SMIM11A-203ENST00000399299 GNG10P50151 68 aa11.87□□□□□ -0.51
SMIM11A-203ENST00000399299 LOXL3P58215 753 aa11.87□□□□□ -0.51
SMIM11A-203ENST00000399299 DEFA6Q01524 100 aa11.87□□□□□ -0.51
SMIM11A-203ENST00000399299 ZNF816Q0VGE8 651 aaPredicted RBP11.87□□□□□ -0.51
SMIM11A-203ENST00000399299 TMEM95Q3KNT9 176 aa11.87□□□□□ -0.51
SMIM11A-203ENST00000399299 FBLN7Q53RD9 439 aa11.87□□□□□ -0.51
SMIM11A-203ENST00000399299 C1orf100Q5SVJ3 147 aa11.87□□□□□ -0.51
SMIM11A-203ENST00000399299 C6orf183Q5T699 404 aa11.87□□□□□ -0.51
SMIM11A-203ENST00000399299 FAM27D1Q5T7N8 215 aa11.87□□□□□ -0.51
SMIM11A-203ENST00000399299 GLT8D1Q68CQ7 371 aa11.87□□□□□ -0.51
SMIM11A-203ENST00000399299 SIGIRRQ6IA17 410 aa11.87□□□□□ -0.51
SMIM11A-203ENST00000399299 TRAT1Q6PIZ9 186 aa11.87□□□□□ -0.51
SMIM11A-203ENST00000399299 LRRTM1Q86UE6 522 aa11.87□□□□□ -0.51
SMIM11A-203ENST00000399299 FAM110DQ8TAY7 271 aaPredicted RBP11.87□□□□□ -0.51
SMIM11A-203ENST00000399299 CCDC107Q8WV48 283 aa11.87□□□□□ -0.51
SMIM11A-203ENST00000399299 UFD1Q92890 307 aa11.87□□□□□ -0.51
SMIM11A-203ENST00000399299 ISYNA1Q9NPH2 558 aa11.87□□□□□ -0.51
SMIM11A-203ENST00000399299 GFOD1Q9NXC2 390 aa11.87□□□□□ -0.51
SMIM11A-203ENST00000399299 ETAA1Q9NY74 926 aa11.87□□□□□ -0.51
SMIM11A-203ENST00000399299 PEX16Q9Y5Y5 336 aa11.87□□□□□ -0.51
SMIM11A-203ENST00000399299 C12orf77C9JDV5 145 aa11.86□□□□□ -0.51
SMIM11A-203ENST00000399299 SDCBPO00560 298 aaPredicted RBP11.86□□□□□ -0.51
SMIM11A-203ENST00000399299 SPINT2O43291 252 aa11.86□□□□□ -0.51
SMIM11A-203ENST00000399299 PDCD6O75340 191 aa11.86□□□□□ -0.51
SMIM11A-203ENST00000399299 OPN1MWP04001 364 aa11.86□□□□□ -0.51
SMIM11A-203ENST00000399299 AMY1AP04745 511 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms