RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 LTC4SQ16873 150 aa12.82□□□□□ -0.36
MBD1-207ENST00000398488 TIMM50Q3ZCQ8 353 aa12.82□□□□□ -0.36
MBD1-207ENST00000398488 GPR107Q5VW38 600 aa12.82□□□□□ -0.36
MBD1-207ENST00000398488 MRPL30Q8TCC3 161 aaKnown RBP12.82□□□□□ -0.36
MBD1-207ENST00000398488 ZNF418Q8TF45 676 aaPredicted RBP12.82□□□□□ -0.36
MBD1-207ENST00000398488 LEAP2Q969E1 77 aa12.82□□□□□ -0.36
MBD1-207ENST00000398488 ARHGAP5-AS1Q96IT6 56 aa12.82□□□□□ -0.36
MBD1-207ENST00000398488 KIRREL1Q96J84 757 aa12.82□□□□□ -0.36
MBD1-207ENST00000398488 NEDD4LQ96PU5 975 aa12.82□□□□□ -0.36
MBD1-207ENST00000398488 MDFIQ99750 246 aa12.82□□□□□ -0.36
MBD1-207ENST00000398488 TMEM133Q9H2Q1 129 aa12.82□□□□□ -0.36
MBD1-207ENST00000398488 HEXA-AS1Q9H8Q6 139 aa12.82□□□□□ -0.36
MBD1-207ENST00000398488 LINC00574Q9H8X3 128 aa12.82□□□□□ -0.36
MBD1-207ENST00000398488 ZNF286AQ9HBT8 521 aa12.82□□□□□ -0.36
MBD1-207ENST00000398488 KCNK7Q9Y2U2 307 aa12.82□□□□□ -0.36
MBD1-207ENST00000398488 GLAP06280 429 aa12.81□□□□□ -0.36
MBD1-207ENST00000398488 BPIFB3P59826 476 aa12.81□□□□□ -0.36
MBD1-207ENST00000398488 GUCA2AQ02747 115 aa12.81□□□□□ -0.36
MBD1-207ENST00000398488 RBM39Q14498 530 aaKnown RBP12.81□□□□□ -0.36
MBD1-207ENST00000398488 KRTAP24-1Q3LI83 254 aa12.81□□□□□ -0.36
MBD1-207ENST00000398488 IDNKQ5T6J7 187 aa12.81□□□□□ -0.36
MBD1-207ENST00000398488 USP43Q70EL4 1123 aa12.81□□□□□ -0.36
MBD1-207ENST00000398488 ANKRD13BQ86YJ7 626 aa12.81□□□□□ -0.36
MBD1-207ENST00000398488 OR11H6Q8NGC7 330 aa12.81□□□□□ -0.36
MBD1-207ENST00000398488 LGALS14Q8TCE9 139 aa12.81□□□□□ -0.36
MBD1-207ENST00000398488 TAF15Q92804 592 aaKnown RBP eCLIP12.81□□□□□ -0.36
MBD1-207ENST00000398488 URM1Q9BTM9 101 aaKnown RBP12.81□□□□□ -0.36
MBD1-207ENST00000398488 PECRQ9BY49 303 aa12.81□□□□□ -0.36
MBD1-207ENST00000398488 GAL3ST2Q9H3Q3 398 aa12.81□□□□□ -0.36
MBD1-207ENST00000398488 AK3Q9UIJ7 227 aa12.81□□□□□ -0.36
MBD1-207ENST00000398488 IGHV2-26A0A0B4J1V2 119 aa12.8□□□□□ -0.36
MBD1-207ENST00000398488 hCG_1809904A0A1W2PP81 198 aa12.8□□□□□ -0.36
MBD1-207ENST00000398488 A0A1W2PPE2 198 aa12.8□□□□□ -0.36
MBD1-207ENST00000398488 A0A1W2PR64 198 aa12.8□□□□□ -0.36
MBD1-207ENST00000398488 A0A1W2PRV1 198 aa12.8□□□□□ -0.36
MBD1-207ENST00000398488 DNAJC9-AS1A6NH13 148 aa12.8□□□□□ -0.36
MBD1-207ENST00000398488 C12orf77C9JDV5 145 aa12.8□□□□□ -0.36
MBD1-207ENST00000398488 RAB27BO00194 218 aa12.8□□□□□ -0.36
MBD1-207ENST00000398488 IL1AP01583 271 aa12.8□□□□□ -0.36
MBD1-207ENST00000398488 MELTFP08582 738 aa12.8□□□□□ -0.36
MBD1-207ENST00000398488 ZNF626Q68DY1 528 aa12.8□□□□□ -0.36
MBD1-207ENST00000398488 Q6YL49 198 aa12.8□□□□□ -0.36
MBD1-207ENST00000398488 ZNF565Q8N9K5 539 aa12.8□□□□□ -0.36
MBD1-207ENST00000398488 IDI2-AS1Q9NZ38 188 aa12.8□□□□□ -0.36
MBD1-207ENST00000398488 ELF5Q9UKW6 265 aaPredicted RBP12.8□□□□□ -0.36
MBD1-207ENST00000398488 HOXA3O43365 443 aaPredicted RBP12.79□□□□□ -0.36
MBD1-207ENST00000398488 GABARAPO95166 117 aa12.79□□□□□ -0.36
MBD1-207ENST00000398488 ARG1P05089 322 aa12.79□□□□□ -0.36
MBD1-207ENST00000398488 RAB6AP20340 208 aa12.79□□□□□ -0.36
MBD1-207ENST00000398488 NFYBP25208 207 aa12.79□□□□□ -0.36
MBD1-207ENST00000398488 SERPINB10P48595 397 aa12.79□□□□□ -0.36
MBD1-207ENST00000398488 BAMBIQ13145 260 aa12.79□□□□□ -0.36
MBD1-207ENST00000398488 SCGB2A2Q13296 93 aa12.79□□□□□ -0.36
MBD1-207ENST00000398488 SLC9A3R2Q15599 337 aa12.79□□□□□ -0.36
MBD1-207ENST00000398488 ABHD12Q8N2K0 398 aa12.79□□□□□ -0.36
MBD1-207ENST00000398488 OR1L1Q8NH94 360 aa12.79□□□□□ -0.36
MBD1-207ENST00000398488 ARL11Q969Q4 196 aa12.79□□□□□ -0.36
MBD1-207ENST00000398488 SLC25A38Q96DW6 304 aa12.79□□□□□ -0.36
MBD1-207ENST00000398488 ZMAT3Q9HA38 289 aaKnown RBP12.79□□□□□ -0.36
MBD1-207ENST00000398488 TNFRSF19Q9NS68 423 aa12.79□□□□□ -0.36
MBD1-207ENST00000398488 PLEKHJ1Q9NW61 149 aa12.79□□□□□ -0.36
MBD1-207ENST00000398488 TRAPPC2LQ9UL33 140 aa12.79□□□□□ -0.36
MBD1-207ENST00000398488 IGHV3-43A0A0B4J1X8 118 aa12.78□□□□□ -0.36
MBD1-207ENST00000398488 NAPSAO96009 420 aa12.78□□□□□ -0.36
MBD1-207ENST00000398488 IGHV4-59P01825 116 aa12.78□□□□□ -0.36
MBD1-207ENST00000398488 IGHV3-43DP0DP04 118 aa12.78□□□□□ -0.36
MBD1-207ENST00000398488 UBA52P62987 128 aaKnown RBP12.78□□□□□ -0.36
MBD1-207ENST00000398488 DYNC1I2Q13409 638 aaKnown RBP12.78□□□□□ -0.36
MBD1-207ENST00000398488 MIDNQ504T8 468 aa12.78□□□□□ -0.36
MBD1-207ENST00000398488 Q6ZTK2 550 aa12.78□□□□□ -0.36
MBD1-207ENST00000398488 GPR141Q7Z602 305 aa12.78□□□□□ -0.36
MBD1-207ENST00000398488 OR56B1Q8NGI3 324 aa12.78□□□□□ -0.36
MBD1-207ENST00000398488 OR4P4Q8NGL7 312 aa12.78□□□□□ -0.36
MBD1-207ENST00000398488 OR13D1Q8NGV5 346 aa12.78□□□□□ -0.36
MBD1-207ENST00000398488 ZDHHC16Q969W1 377 aa12.78□□□□□ -0.36
MBD1-207ENST00000398488 MBNL3Q9NUK0 354 aaKnown RBP12.78□□□□□ -0.36
MBD1-207ENST00000398488 HSF4Q9ULV5 492 aa12.78□□□□□ -0.36
MBD1-207ENST00000398488 A0A087X0M5 115 aa12.78□□□□□ -0.36
MBD1-207ENST00000398488 A0A0A6YYJ9 748 aa12.78□□□□□ -0.36
MBD1-207ENST00000398488 A0A1B0GX30 115 aa12.78□□□□□ -0.36
MBD1-207ENST00000398488 A0A1W2PPE3 182 aa12.78□□□□□ -0.36
MBD1-207ENST00000398488 IGLV1-47P01700 117 aa12.78□□□□□ -0.36
MBD1-207ENST00000398488 GNB3P16520 340 aa12.78□□□□□ -0.36
MBD1-207ENST00000398488 GZMHP20718 246 aa12.78□□□□□ -0.36
MBD1-207ENST00000398488 CD34P28906 385 aa12.78□□□□□ -0.36
MBD1-207ENST00000398488 LOXL3P58215 753 aa12.78□□□□□ -0.36
MBD1-207ENST00000398488 KRTAP21-3Q3LHN1 58 aa12.78□□□□□ -0.36
MBD1-207ENST00000398488 ZNF880Q6PDB4 577 aa12.78□□□□□ -0.36
MBD1-207ENST00000398488 OR10R2Q8NGX6 335 aa12.78□□□□□ -0.36
MBD1-207ENST00000398488 NDNFQ8TB73 568 aa12.78□□□□□ -0.36
MBD1-207ENST00000398488 PTX4Q96A99 478 aa12.78□□□□□ -0.36
MBD1-207ENST00000398488 CLEC7AQ9BXN2 247 aa12.78□□□□□ -0.36
MBD1-207ENST00000398488 ATG5Q9H1Y0 275 aa12.78□□□□□ -0.36
MBD1-207ENST00000398488 MFNGO00587 321 aa12.77□□□□□ -0.37
MBD1-207ENST00000398488 ORC5O43913 435 aa12.77□□□□□ -0.37
MBD1-207ENST00000398488 CA11O75493 328 aa12.77□□□□□ -0.37
MBD1-207ENST00000398488 HBZP02008 142 aa12.77□□□□□ -0.37
MBD1-207ENST00000398488 IER3P46695 156 aa12.77□□□□□ -0.37
MBD1-207ENST00000398488 RBMS3Q6XE24 437 aaKnown RBP12.77□□□□□ -0.37
MBD1-207ENST00000398488 LDLRAD3Q86YD5 345 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 414 ms