RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 COL19A1Q14993 1142 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 SLC25A53Q5H9E4 307 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 VAX1Q5SQQ9 334 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 PMS2CLQ68D20 193 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 RPUSD3Q6P087 351 aaKnown RBP4.28□□□□□ -1.72
SMAD4-202ENST00000398417 LINC00518Q8N0U6 118 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 TMEM123Q8N131 208 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 PP6455Q8WZ26 134 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 SPSB1Q96BD6 273 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 ARRDC1-AS1Q9H2J1 176 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 FAM212BQ9NTI7 297 aaPredicted RBP4.28□□□□□ -1.72
SMAD4-202ENST00000398417 PLXNB2O15031 1838 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 A8MXE2 369 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 FGF16O43320 207 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 GRPP07492 148 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 UMODP07911 640 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 FUT3P21217 361 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 FOXG1P55316 489 aaPredicted RBP4.28□□□□□ -1.72
SMAD4-202ENST00000398417 TCL1AP56279 114 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 STARD6P59095 220 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 HGFACQ04756 655 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 OR4S2Q8NH73 311 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 SPIN2AQ99865 258 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 SPIN2BQ9BPZ2 258 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 TWSG1Q9GZX9 223 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 CHRNA10Q9GZZ6 450 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 WNT5BQ9H1J7 359 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 STARD10Q9Y365 291 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 RFNGQ9Y644 331 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 ARID2Q68CP9 1835 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 ZNF816-ZNF321PA0A0X1KG74 233 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 RPL36A-HNRNPH2H7BZ11 118 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 TRIM77I1YAP6 450 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 CELA3AP09093 270 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 CEACAM21Q3KPI0 293 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 SPINK14Q6IE38 97 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 UQCC3Q6UW78 93 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.28□□□□□ -1.72
SMAD4-202ENST00000398417 FADS6Q8N9I5 356 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 OR13C6PQ8NH95 151 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 PSMF1Q92530 271 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 YAE1D1Q9NRH1 226 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 PLSCR4Q9NRQ2 329 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 ZNF355PQ9NSJ1 428 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 BOKQ9UMX3 212 aaPredicted RBP4.28□□□□□ -1.72
SMAD4-202ENST00000398417 MSTNO14793 375 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 SYNGR1O43759 233 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 C1QL1O75973 258 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 MBPP02686 304 aaPredicted RBP4.28□□□□□ -1.72
SMAD4-202ENST00000398417 ARG1P05089 322 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 RAB1AP62820 205 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 NKX6-1P78426 367 aaPredicted RBP4.28□□□□□ -1.72
SMAD4-202ENST00000398417 KIAA0141Q14154 515 aaPredicted RBP4.28□□□□□ -1.72
SMAD4-202ENST00000398417 MIDNQ504T8 468 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 TFAP2EQ6VUC0 442 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 WDR5BQ86VZ2 330 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 DTX1Q86Y01 620 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 ABHD3Q8WU67 409 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 TMEM38BQ9NVV0 291 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 V9GYS6 101 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 K7ESF4 209 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 PDCD6O75340 191 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 CST2P09228 141 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 RAB13P51153 203 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 CTAG1AP78358 180 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 NSUN5P2Q63ZY6 315 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 GAPTQ8N292 157 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 WFDC11Q8NEX6 87 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 FDCSPQ8NFU4 85 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 SMCO4Q9NRQ5 59 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 COX11Q9Y6N1 276 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 PLXND1Q9Y4D7 1925 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 CDRT15L2A8MXV6 281 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 UMAD1C9J7I0 102 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 ELLP55199 621 aaPredicted RBP4.27□□□□□ -1.73
SMAD4-202ENST00000398417 RPL23AP62750 156 aaKnown RBP4.27□□□□□ -1.73
SMAD4-202ENST00000398417 TMEM267Q0VDI3 215 aaPredicted RBP4.27□□□□□ -1.73
SMAD4-202ENST00000398417 LIAT1Q6ZQX7 453 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 OR4A4PQ8NGN8 299 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 OR8U1Q8NH10 309 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 MARS2Q96GW9 593 aaKnown RBP4.27□□□□□ -1.73
SMAD4-202ENST00000398417 NOL4LQ96MY1 436 aaPredicted RBP4.27□□□□□ -1.73
SMAD4-202ENST00000398417 C12orf57Q99622 126 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 SF3B5Q9BWJ5 86 aaKnown RBP4.27□□□□□ -1.73
SMAD4-202ENST00000398417 DCAF16Q9NXF7 216 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 DOCK4Q8N1I0 1966 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 IGKV1-12A0A0C4DH73 117 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 DHRS7CA6NNS2 312 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 IGKV1D-12P01611 117 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 APOA2P02652 100 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 RUNX1Q01196 453 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 OR1C1Q15619 314 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 CLEC12BQ2HXU8 276 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 AWAT1Q58HT5 328 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 NCMAPQ5T1S8 102 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 TBC1D26Q86UD7 250 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 ZDHHC23Q8IYP9 409 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 NUDT10Q8NFP7 164 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 OR52M1Q8NGK5 317 aa4.27□□□□□ -1.73
SMAD4-202ENST00000398417 NUDT11Q96G61 164 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms