RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 GAB2Q9UQC2 676 aa13.76□□□□□ -0.21
CHMP1A-201ENST00000397901 LY6G6EA0A0G2JKS1 128 aa13.76□□□□□ -0.21
CHMP1A-201ENST00000397901 DKK1O94907 266 aa13.76□□□□□ -0.21
CHMP1A-201ENST00000397901 PATE4P0C8F1 98 aa13.76□□□□□ -0.21
CHMP1A-201ENST00000397901 DTYMKP23919 212 aa13.76□□□□□ -0.21
CHMP1A-201ENST00000397901 EPHA8P29322 1005 aaPredicted RBP13.76□□□□□ -0.21
CHMP1A-201ENST00000397901 TGIF2LYQ8IUE0 185 aa13.76□□□□□ -0.21
CHMP1A-201ENST00000397901 LGI3Q8N145 548 aa13.76□□□□□ -0.21
CHMP1A-201ENST00000397901 FBXL14Q8N1E6 418 aa13.76□□□□□ -0.21
CHMP1A-201ENST00000397901 SUMF1Q8NBK3 374 aa13.76□□□□□ -0.21
CHMP1A-201ENST00000397901 SPSB1Q96BD6 273 aa13.76□□□□□ -0.21
CHMP1A-201ENST00000397901 BORCS8Q96FH0 119 aa13.76□□□□□ -0.21
CHMP1A-201ENST00000397901 PYGO2Q9BRQ0 406 aa13.76□□□□□ -0.21
CHMP1A-201ENST00000397901 HIPK2Q9H2X6 1198 aa13.76□□□□□ -0.21
CHMP1A-201ENST00000397901 RARRES3Q9UL19 164 aa13.76□□□□□ -0.21
CHMP1A-201ENST00000397901 U3KQA8 63 aa13.76□□□□□ -0.21
CHMP1A-201ENST00000397901 IGKV1-12A0A0C4DH73 117 aa13.75□□□□□ -0.21
CHMP1A-201ENST00000397901 IGKV1D-12P01611 117 aa13.75□□□□□ -0.21
CHMP1A-201ENST00000397901 LCATP04180 440 aa13.75□□□□□ -0.21
CHMP1A-201ENST00000397901 BRS3P32247 399 aa13.75□□□□□ -0.21
CHMP1A-201ENST00000397901 RAB11AP62491 216 aa13.75□□□□□ -0.21
CHMP1A-201ENST00000397901 FBXW9Q5XUX1 488 aa13.75□□□□□ -0.21
CHMP1A-201ENST00000397901 ZNF66Q6ZN08 573 aa13.75□□□□□ -0.21
CHMP1A-201ENST00000397901 CDX2Q99626 313 aaPredicted RBP13.75□□□□□ -0.21
CHMP1A-201ENST00000397901 SDF2L1Q9HCN8 221 aa13.75□□□□□ -0.21
CHMP1A-201ENST00000397901 HSF4Q9ULV5 492 aa13.75□□□□□ -0.21
CHMP1A-201ENST00000397901 PITX3O75364 302 aa13.75□□□□□ -0.21
CHMP1A-201ENST00000397901 OR10J1P30954 320 aa13.75□□□□□ -0.21
CHMP1A-201ENST00000397901 ZFP36L1Q07352 338 aaKnown RBP13.75□□□□□ -0.21
CHMP1A-201ENST00000397901 GNMTQ14749 295 aa13.75□□□□□ -0.21
CHMP1A-201ENST00000397901 LYSMD4Q5XG99 296 aa13.75□□□□□ -0.21
CHMP1A-201ENST00000397901 GUSBP11Q6P575 273 aa13.75□□□□□ -0.21
CHMP1A-201ENST00000397901 Q6ZSR3 168 aa13.75□□□□□ -0.21
CHMP1A-201ENST00000397901 FOXL2NBQ6ZUU3 175 aa13.75□□□□□ -0.21
CHMP1A-201ENST00000397901 TMEM170AQ8WVE7 144 aa13.75□□□□□ -0.21
CHMP1A-201ENST00000397901 C10orf35Q96D05 121 aa13.75□□□□□ -0.21
CHMP1A-201ENST00000397901 BOD1Q96IK1 185 aa13.75□□□□□ -0.21
CHMP1A-201ENST00000397901 TP53RKQ96S44 253 aa13.75□□□□□ -0.21
CHMP1A-201ENST00000397901 FAM24AA6NFZ4 105 aa13.74□□□□□ -0.21
CHMP1A-201ENST00000397901 IRF2P14316 349 aa13.74□□□□□ -0.21
CHMP1A-201ENST00000397901 AADACP22760 399 aa13.74□□□□□ -0.21
CHMP1A-201ENST00000397901 OMGP23515 440 aa13.74□□□□□ -0.21
CHMP1A-201ENST00000397901 TRA2AQ13595 282 aaKnown RBP eCLIP13.74□□□□□ -0.21
CHMP1A-201ENST00000397901 CNN3Q15417 329 aaKnown RBP13.74□□□□□ -0.21
CHMP1A-201ENST00000397901 AARDQ4LEZ3 155 aa13.74□□□□□ -0.21
CHMP1A-201ENST00000397901 MAML2Q8IZL2 1156 aaPredicted RBP13.74□□□□□ -0.21
CHMP1A-201ENST00000397901 LRTM2Q8N967 370 aa13.74□□□□□ -0.21
CHMP1A-201ENST00000397901 PARD6AQ9NPB6 346 aa13.74□□□□□ -0.21
CHMP1A-201ENST00000397901 NAGKQ9UJ70 344 aa13.74□□□□□ -0.21
CHMP1A-201ENST00000397901 A0A1W2PQM1 296 aa13.74□□□□□ -0.21
CHMP1A-201ENST00000397901 TNFSF11O14788 317 aa13.74□□□□□ -0.21
CHMP1A-201ENST00000397901 SIAH2O43255 324 aa13.74□□□□□ -0.21
CHMP1A-201ENST00000397901 ONECUT2O95948 504 aa13.74□□□□□ -0.21
CHMP1A-201ENST00000397901 ELLP55199 621 aaPredicted RBP13.74□□□□□ -0.21
CHMP1A-201ENST00000397901 HERV-K104P61576 105 aa13.74□□□□□ -0.21
CHMP1A-201ENST00000397901 VAMP2P63027 116 aa13.74□□□□□ -0.21
CHMP1A-201ENST00000397901 DPPA3Q6W0C5 159 aa13.74□□□□□ -0.21
CHMP1A-201ENST00000397901 P4HA3Q7Z4N8 544 aa13.74□□□□□ -0.21
CHMP1A-201ENST00000397901 GNPNAT1Q96EK6 184 aaPredicted RBP13.74□□□□□ -0.21
CHMP1A-201ENST00000397901 DUSP23Q9BVJ7 150 aa13.74□□□□□ -0.21
CHMP1A-201ENST00000397901 ZNF286AQ9HBT8 521 aa13.74□□□□□ -0.21
CHMP1A-201ENST00000397901 C19orf25Q9UFG5 118 aaPredicted RBP13.74□□□□□ -0.21
CHMP1A-201ENST00000397901 ST3GAL6Q9Y274 331 aa13.74□□□□□ -0.21
CHMP1A-201ENST00000397901 TNRC6BQ9UPQ9 1833 aaKnown RBP13.74□□□□□ -0.21
CHMP1A-201ENST00000397901 PI4KAP42356 2102 aa13.74□□□□□ -0.21
CHMP1A-201ENST00000397901 ZNF732B4DXR9 585 aa13.73□□□□□ -0.21
CHMP1A-201ENST00000397901 TCF21O43680 179 aa13.73□□□□□ -0.21
CHMP1A-201ENST00000397901 CCL3P10147 92 aa13.73□□□□□ -0.21
CHMP1A-201ENST00000397901 CD82P27701 267 aa13.73□□□□□ -0.21
CHMP1A-201ENST00000397901 Q6ZPA2 131 aa13.73□□□□□ -0.21
CHMP1A-201ENST00000397901 OSR2Q8N2R0 312 aa13.73□□□□□ -0.21
CHMP1A-201ENST00000397901 ZIC4Q8N9L1 334 aa13.73□□□□□ -0.21
CHMP1A-201ENST00000397901 SAP25Q8TEE9 199 aa13.73□□□□□ -0.21
CHMP1A-201ENST00000397901 GAL3ST2Q9H3Q3 398 aa13.73□□□□□ -0.21
CHMP1A-201ENST00000397901 NKX2-6A6NCS4 301 aa13.73□□□□□ -0.21
CHMP1A-201ENST00000397901 B4E171 279 aa13.73□□□□□ -0.21
CHMP1A-201ENST00000397901 SLC33A1O00400 549 aaPredicted RBP13.73□□□□□ -0.21
CHMP1A-201ENST00000397901 GDF9O60383 454 aa13.73□□□□□ -0.21
CHMP1A-201ENST00000397901 HPRT1P00492 218 aa13.73□□□□□ -0.21
CHMP1A-201ENST00000397901 PFN1P07737 140 aaKnown RBP13.73□□□□□ -0.21
CHMP1A-201ENST00000397901 CRYGSP22914 178 aa13.73□□□□□ -0.21
CHMP1A-201ENST00000397901 CCL7P80098 99 aa13.73□□□□□ -0.21
CHMP1A-201ENST00000397901 OR2C3Q8N628 320 aa13.73□□□□□ -0.21
CHMP1A-201ENST00000397901 MOB3AQ96BX8 217 aa13.73□□□□□ -0.21
CHMP1A-201ENST00000397901 CALHM2Q9HA72 323 aa13.73□□□□□ -0.21
CHMP1A-201ENST00000397901 ITGB1BP1O14713 200 aa13.72□□□□□ -0.21
CHMP1A-201ENST00000397901 NRASP01111 189 aa13.72□□□□□ -0.21
CHMP1A-201ENST00000397901 IL6RP08887 468 aaPredicted RBP13.72□□□□□ -0.21
CHMP1A-201ENST00000397901 FKBP2P26885 142 aaKnown RBP13.72□□□□□ -0.21
CHMP1A-201ENST00000397901 RBX1P62877 108 aa13.72□□□□□ -0.21
CHMP1A-201ENST00000397901 FAM27BQ5VT28 67 aa13.72□□□□□ -0.21
CHMP1A-201ENST00000397901 GBGT1Q8N5D6 347 aa13.72□□□□□ -0.21
CHMP1A-201ENST00000397901 OR4D5Q8NGN0 318 aa13.72□□□□□ -0.21
CHMP1A-201ENST00000397901 C22orf15Q8WYQ4 148 aa13.72□□□□□ -0.21
CHMP1A-201ENST00000397901 MAGT1Q9H0U3 335 aa13.72□□□□□ -0.21
CHMP1A-201ENST00000397901 CISD1Q9NZ45 108 aaKnown RBP13.72□□□□□ -0.21
CHMP1A-201ENST00000397901 SLC7A11Q9UPY5 501 aa13.72□□□□□ -0.21
CHMP1A-201ENST00000397901 LAMP3Q9UQV4 416 aa13.72□□□□□ -0.21
CHMP1A-201ENST00000397901 DMDP11532 3685 aa13.72□□□□□ -0.21
CHMP1A-201ENST00000397901 CCDC163A0A0D9SF12 145 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms