RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 ZDHHC8Q9ULC8 765 aa15.7■□□□□ 0.1
CHRFAM7A-202ENST00000397827 NSG2Q9Y328 171 aa15.7■□□□□ 0.1
CHRFAM7A-202ENST00000397827 C3orf85A0A1B0GTC6 90 aa15.69■□□□□ 0.1
CHRFAM7A-202ENST00000397827 TRAPPC2LH3BP13 241 aa15.69■□□□□ 0.1
CHRFAM7A-202ENST00000397827 MPPED1O15442 326 aa15.69■□□□□ 0.1
CHRFAM7A-202ENST00000397827 NME2P1O60361 137 aa15.69■□□□□ 0.1
CHRFAM7A-202ENST00000397827 WNT5AP41221 380 aa15.69■□□□□ 0.1
CHRFAM7A-202ENST00000397827 SULT1A2P50226 295 aa15.69■□□□□ 0.1
CHRFAM7A-202ENST00000397827 PLP2Q04941 152 aa15.69■□□□□ 0.1
CHRFAM7A-202ENST00000397827 GAMTQ14353 236 aa15.69■□□□□ 0.1
CHRFAM7A-202ENST00000397827 HERPUD1Q15011 391 aa15.69■□□□□ 0.1
CHRFAM7A-202ENST00000397827 CCDC71LQ8N9Z2 235 aa15.69■□□□□ 0.1
CHRFAM7A-202ENST00000397827 PLEKHA2Q9HB19 425 aa15.69■□□□□ 0.1
CHRFAM7A-202ENST00000397827 Q9N2K0 584 aa15.69■□□□□ 0.1
CHRFAM7A-202ENST00000397827 GAR1Q9NY12 217 aaKnown RBP15.69■□□□□ 0.1
CHRFAM7A-202ENST00000397827 SS18L1O75177 396 aaPredicted RBP15.69■□□□□ 0.1
CHRFAM7A-202ENST00000397827 HOXA5P20719 270 aa15.69■□□□□ 0.1
CHRFAM7A-202ENST00000397827 ARR3P36575 388 aa15.69■□□□□ 0.1
CHRFAM7A-202ENST00000397827 PMELP40967 661 aa15.69■□□□□ 0.1
CHRFAM7A-202ENST00000397827 HIST1H2AAQ96QV6 131 aa15.69■□□□□ 0.1
CHRFAM7A-202ENST00000397827 WFDC1Q9HC57 220 aa15.69■□□□□ 0.1
CHRFAM7A-202ENST00000397827 SPENQ96T58 3664 aaKnown RBP15.68■□□□□ 0.1
CHRFAM7A-202ENST00000397827 TNRC6AQ8NDV7 1962 aaKnown RBP15.68■□□□□ 0.1
CHRFAM7A-202ENST00000397827 ZFHX4Q86UP3 3567 aa15.68■□□□□ 0.1
CHRFAM7A-202ENST00000397827 C9JQL5 133 aa15.68■□□□□ 0.1
CHRFAM7A-202ENST00000397827 NAPSAO96009 420 aa15.68■□□□□ 0.1
CHRFAM7A-202ENST00000397827 GAPDHP04406 335 aaKnown RBP15.68■□□□□ 0.1
CHRFAM7A-202ENST00000397827 G0S2P27469 103 aa15.68■□□□□ 0.1
CHRFAM7A-202ENST00000397827 CAV2P51636 162 aa15.68■□□□□ 0.1
CHRFAM7A-202ENST00000397827 SLC10A1Q14973 349 aa15.68■□□□□ 0.1
CHRFAM7A-202ENST00000397827 RNPS1Q15287 305 aaKnown RBP15.68■□□□□ 0.1
CHRFAM7A-202ENST00000397827 SPATA46Q5T0L3 261 aa15.68■□□□□ 0.1
CHRFAM7A-202ENST00000397827 Q6ZRG5 221 aa15.68■□□□□ 0.1
CHRFAM7A-202ENST00000397827 UBAC2Q8NBM4 344 aa15.68■□□□□ 0.1
CHRFAM7A-202ENST00000397827 MDS2Q8NDY4 140 aa15.68■□□□□ 0.1
CHRFAM7A-202ENST00000397827 AKR1E2Q96JD6 320 aa15.68■□□□□ 0.1
CHRFAM7A-202ENST00000397827 KLF13Q9Y2Y9 288 aaPredicted RBP15.68■□□□□ 0.1
CHRFAM7A-202ENST00000397827 KLRC4-KLRK1H3BQV0 150 aa15.68■□□□□ 0.1
CHRFAM7A-202ENST00000397827 IL18BPO95998 194 aa15.68■□□□□ 0.1
CHRFAM7A-202ENST00000397827 CD80P33681 288 aa15.68■□□□□ 0.1
CHRFAM7A-202ENST00000397827 NHLH2Q02577 135 aa15.68■□□□□ 0.1
CHRFAM7A-202ENST00000397827 RNFT1Q5M7Z0 435 aa15.68■□□□□ 0.1
CHRFAM7A-202ENST00000397827 ZNF818PQ6ZRF7 136 aa15.68■□□□□ 0.1
CHRFAM7A-202ENST00000397827 TBC1D26Q86UD7 250 aa15.68■□□□□ 0.1
CHRFAM7A-202ENST00000397827 MKXQ8IYA7 352 aa15.68■□□□□ 0.1
CHRFAM7A-202ENST00000397827 C17orf78Q8N4C9 275 aa15.68■□□□□ 0.1
CHRFAM7A-202ENST00000397827 OR10D4PQ8NGN7 298 aa15.68■□□□□ 0.1
CHRFAM7A-202ENST00000397827 IP6K3Q96PC2 410 aa15.68■□□□□ 0.1
CHRFAM7A-202ENST00000397827 IGKV1D-13A0A0B4J2D9 117 aa15.67■□□□□ 0.1
CHRFAM7A-202ENST00000397827 FAM90A10PA6NDY2 464 aa15.67■□□□□ 0.1
CHRFAM7A-202ENST00000397827 FAM90A18PA6NE21 464 aa15.67■□□□□ 0.1
CHRFAM7A-202ENST00000397827 FAM90A16PA6NEW6 464 aa15.67■□□□□ 0.1
CHRFAM7A-202ENST00000397827 FAM90A20PA6NIJ5 464 aa15.67■□□□□ 0.1
CHRFAM7A-202ENST00000397827 FAM90A8PA6NJQ4 464 aa15.67■□□□□ 0.1
CHRFAM7A-202ENST00000397827 FAM90A7PA6NKC0 464 aa15.67■□□□□ 0.1
CHRFAM7A-202ENST00000397827 FAM90A22PA8MWA6 464 aa15.67■□□□□ 0.1
CHRFAM7A-202ENST00000397827 FAM90A12PA8MX19 464 aa15.67■□□□□ 0.1
CHRFAM7A-202ENST00000397827 FAM90A5PA8MXJ8 464 aa15.67■□□□□ 0.1
CHRFAM7A-202ENST00000397827 FAM90A23PA8MXZ1 464 aa15.67■□□□□ 0.1
CHRFAM7A-202ENST00000397827 TK1P04183 234 aa15.67■□□□□ 0.1
CHRFAM7A-202ENST00000397827 FAM90A15PP0C7V4 464 aa15.67■□□□□ 0.1
CHRFAM7A-202ENST00000397827 FAM90A13PP0C7W8 464 aa15.67■□□□□ 0.1
CHRFAM7A-202ENST00000397827 FAM90A14PP0C7W9 464 aa15.67■□□□□ 0.1
CHRFAM7A-202ENST00000397827 FAM90A24PP0C7X0 464 aa15.67■□□□□ 0.1
CHRFAM7A-202ENST00000397827 IGKV1-13P0DP09 117 aa15.67■□□□□ 0.1
CHRFAM7A-202ENST00000397827 CDX1P47902 265 aaPredicted RBP15.67■□□□□ 0.1
CHRFAM7A-202ENST00000397827 ASCL1P50553 236 aa15.67■□□□□ 0.1
CHRFAM7A-202ENST00000397827 SUMF1Q8NBK3 374 aa15.67■□□□□ 0.1
CHRFAM7A-202ENST00000397827 PLSCR2Q9NRY7 297 aa15.67■□□□□ 0.1
CHRFAM7A-202ENST00000397827 FAM86C1Q9NVL1 165 aa15.67■□□□□ 0.1
CHRFAM7A-202ENST00000397827 CACFD1Q9UGQ2 172 aa15.67■□□□□ 0.1
CHRFAM7A-202ENST00000397827 TSTD3H0UI37 97 aa15.67■□□□□ 0.1
CHRFAM7A-202ENST00000397827 HS3ST1O14792 307 aa15.67■□□□□ 0.1
CHRFAM7A-202ENST00000397827 PKIAP61925 76 aa15.67■□□□□ 0.1
CHRFAM7A-202ENST00000397827 CLN3Q13286 438 aa15.67■□□□□ 0.1
CHRFAM7A-202ENST00000397827 OR2T2Q6IF00 324 aa15.67■□□□□ 0.1
CHRFAM7A-202ENST00000397827 C20orf204Q6ZNR8 217 aa15.67■□□□□ 0.1
CHRFAM7A-202ENST00000397827 OR5A2Q8NGI9 324 aa15.67■□□□□ 0.1
CHRFAM7A-202ENST00000397827 C20orf24Q9BUV8 137 aa15.67■□□□□ 0.1
CHRFAM7A-202ENST00000397827 MRPL37Q9BZE1 423 aaKnown RBP15.67■□□□□ 0.1
CHRFAM7A-202ENST00000397827 RCL1Q9Y2P8 373 aaKnown RBP15.67■□□□□ 0.1
CHRFAM7A-202ENST00000397827 MED12LQ86YW9 2145 aa15.66■□□□□ 0.1
CHRFAM7A-202ENST00000397827 C7orf77A4D0Y5 90 aa15.66■□□□□ 0.1
CHRFAM7A-202ENST00000397827 NKX2-6A6NCS4 301 aa15.66■□□□□ 0.1
CHRFAM7A-202ENST00000397827 ST8SIA3O43173 380 aa15.66■□□□□ 0.1
CHRFAM7A-202ENST00000397827 APLNRP35414 380 aa15.66■□□□□ 0.1
CHRFAM7A-202ENST00000397827 KIAA0141Q14154 515 aaPredicted RBP15.66■□□□□ 0.1
CHRFAM7A-202ENST00000397827 TMPRSS7Q7RTY8 843 aa15.66■□□□□ 0.1
CHRFAM7A-202ENST00000397827 SAXO1Q8IYX7 474 aa15.66■□□□□ 0.1
CHRFAM7A-202ENST00000397827 GAPTQ8N292 157 aa15.66■□□□□ 0.1
CHRFAM7A-202ENST00000397827 OR5P3Q8WZ94 311 aa15.66■□□□□ 0.1
CHRFAM7A-202ENST00000397827 RDH5Q92781 318 aa15.66■□□□□ 0.1
CHRFAM7A-202ENST00000397827 UBE2J1Q9Y385 318 aaPredicted RBP15.66■□□□□ 0.1
CHRFAM7A-202ENST00000397827 TMED3Q9Y3Q3 217 aa15.66■□□□□ 0.1
CHRFAM7A-202ENST00000397827 IGKV1-6A0A0C4DH72 117 aa15.66■□□□□ 0.1
CHRFAM7A-202ENST00000397827 ARG1P05089 322 aa15.66■□□□□ 0.1
CHRFAM7A-202ENST00000397827 OR8U9P0C7N5 309 aa15.66■□□□□ 0.1
CHRFAM7A-202ENST00000397827 NDUFA6P56556 154 aa15.66■□□□□ 0.1
CHRFAM7A-202ENST00000397827 BTNL8Q6UX41 500 aa15.66■□□□□ 0.1
CHRFAM7A-202ENST00000397827 OR8U1Q8NH10 309 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms