RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 DEFB124Q8NES8 71 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 OR11L1Q8NGX0 322 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 CORO2AQ92828 525 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 ARPC5LQ9BPX5 153 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 IGKV1-12A0A0C4DH73 117 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 C5orf49A4QMS7 147 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 ZNF732B4DXR9 585 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 ABCD4O14678 606 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 IGKV1D-12P01611 117 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 CGB3P0DN86 165 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 CGB7P0DN87 165 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 VAMP2P63027 116 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 TMED4Q7Z7H5 227 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 ZNF429Q86V71 674 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 STARD4Q96DR4 205 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 RBMXL1Q96E39 390 aaKnown RBP4.99□□□□□ -1.61
PTPRD-206ENST00000397617 TMEM165Q9HC07 324 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 TMPRSS3P57727 454 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 DBPQ10586 325 aaPredicted RBP4.99□□□□□ -1.61
PTPRD-206ENST00000397617 ZNF154Q13106 437 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 TMEM255AQ5JRV8 349 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 ZNF497Q6ZNH5 498 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 ASCL5Q7RTU5 278 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.99□□□□□ -1.61
PTPRD-206ENST00000397617 TTTY10Q9BZA0 68 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 WDR13Q9H1Z4 485 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 PLXNB1O43157 2135 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 SMIM30A4D0T7 59 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 WIPF3A6NGB9 483 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 OOEPA6NGQ2 149 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 SMLR1H3BR10 107 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 SPINT2O43291 252 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 TGOLN2O43493 480 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 YPEL1O60688 119 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 SMPD2O60906 423 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 SERPINE2P07093 398 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 RHEBQ15382 184 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 CENPVQ7Z7K6 275 aaPredicted RBP4.99□□□□□ -1.61
PTPRD-206ENST00000397617 AKR7LQ8NHP1 331 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 MARCH1Q8TCQ1 289 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 MRPL24Q96A35 216 aaKnown RBP4.99□□□□□ -1.61
PTPRD-206ENST00000397617 TMEM230Q96A57 120 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 YPEL2Q96QA6 119 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 VSIG4Q9Y279 399 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 MBP02144 154 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 HAAOP46952 286 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 CARD17Q5XLA6 110 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 LINC00311Q8N616 119 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 OR11H4Q8NGC9 324 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 SMIM8Q96KF7 97 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 K7N7A8 449 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 MPPED1O15442 326 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 ZNF737O75373 536 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 S100A2P29034 98 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 EXOSC2Q13868 293 aaKnown RBP4.99□□□□□ -1.61
PTPRD-206ENST00000397617 SNAI3Q3KNW1 292 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 SULT4A1Q9BR01 284 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 LRFN3Q9BTN0 628 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 ABCA2Q9BZC7 2435 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 PINLYPA6NC86 204 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 ARPC5O15511 151 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 PRH1P02810 166 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 LUMP51884 338 aaPredicted RBP4.99□□□□□ -1.61
PTPRD-206ENST00000397617 HGFACQ04756 655 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 MDP1Q86V88 176 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 OR10J5Q8NHC4 309 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 WDR89Q96FK6 387 aaPredicted RBP4.99□□□□□ -1.61
PTPRD-206ENST00000397617 AP1S3Q96PC3 154 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 RNF5Q99942 180 aa4.99□□□□□ -1.61
PTPRD-206ENST00000397617 F5H0A9 414 aaPredicted RBP4.98□□□□□ -1.61
PTPRD-206ENST00000397617 C16orf97H3BN30 126 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 PITX3O75364 302 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 SULT1A2P50226 295 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 CD81P60033 236 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 KLF14Q8TD94 323 aaPredicted RBP4.98□□□□□ -1.61
PTPRD-206ENST00000397617 ZNF837Q96EG3 531 aaPredicted RBP4.98□□□□□ -1.61
PTPRD-206ENST00000397617 RTBDNQ9BSG5 229 aaPredicted RBP4.98□□□□□ -1.61
PTPRD-206ENST00000397617 KIAA1456Q9P272 454 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 ZNF257Q9Y2Q1 563 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 K7EPK0 472 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 F2RL2O00254 374 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 HS3ST1O14792 307 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 IGHV2-70P01814 119 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 P2RX3P56373 397 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 RAB5BP61020 215 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 PSG7Q13046 419 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 SCGB2B2Q4G0G5 96 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 TMUB2Q71RG4 321 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 IGKV1-27A0A075B6S5 117 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 SHISA8B8ZZ34 492 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 PDGFAP04085 211 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 DBHP09172 617 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 SERPINA2P20848 420 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 FCGR2CP31995 323 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 KLF3P57682 345 aaPredicted RBP4.98□□□□□ -1.61
PTPRD-206ENST00000397617 CD300CQ08708 224 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 MOGAT2Q3SYC2 334 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 OR4S1Q8NGB4 309 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 VSTM2AQ8TAG5 236 aa4.98□□□□□ -1.61
PTPRD-206ENST00000397617 TMEM171Q8WVE6 324 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms