RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 NKX3-1Q99801 234 aaPredicted RBP11.22□□□□□ -0.61
SEC13-204ENST00000397099 ZNF286AQ9HBT8 521 aa11.22□□□□□ -0.61
SEC13-204ENST00000397099 ING3Q9NXR8 418 aa11.22□□□□□ -0.61
SEC13-204ENST00000397099 LSM2Q9Y333 95 aaKnown RBP11.22□□□□□ -0.61
SEC13-204ENST00000397099 A0A1W2PPK0 400 aa11.21□□□□□ -0.61
SEC13-204ENST00000397099 ERICH4A6NGS2 130 aa11.21□□□□□ -0.61
SEC13-204ENST00000397099 LY6LH3BQJ8 138 aa11.21□□□□□ -0.61
SEC13-204ENST00000397099 PEX14O75381 377 aa11.21□□□□□ -0.61
SEC13-204ENST00000397099 ARL6IP5O75915 188 aa11.21□□□□□ -0.61
SEC13-204ENST00000397099 FAM106CPP0CH98 169 aa11.21□□□□□ -0.61
SEC13-204ENST00000397099 MGMTP16455 207 aa11.21□□□□□ -0.61
SEC13-204ENST00000397099 SRMP19623 302 aa11.21□□□□□ -0.61
SEC13-204ENST00000397099 FUT3P21217 361 aa11.21□□□□□ -0.61
SEC13-204ENST00000397099 PAX6P26367 422 aa11.21□□□□□ -0.61
SEC13-204ENST00000397099 RAB7AP51149 207 aa11.21□□□□□ -0.61
SEC13-204ENST00000397099 RAB13P51153 203 aa11.21□□□□□ -0.61
SEC13-204ENST00000397099 KRTAP10-3P60369 221 aa11.21□□□□□ -0.61
SEC13-204ENST00000397099 TPBGQ13641 420 aa11.21□□□□□ -0.61
SEC13-204ENST00000397099 C6orf183Q5T699 404 aa11.21□□□□□ -0.61
SEC13-204ENST00000397099 TPTE2P1Q5T6R2 138 aa11.21□□□□□ -0.61
SEC13-204ENST00000397099 LYPD6Q86Y78 171 aa11.21□□□□□ -0.61
SEC13-204ENST00000397099 OR8H3Q8N146 312 aa11.21□□□□□ -0.61
SEC13-204ENST00000397099 PLPPR1Q8TBJ4 325 aa11.21□□□□□ -0.61
SEC13-204ENST00000397099 MRGPRDQ8TDS7 321 aa11.21□□□□□ -0.61
SEC13-204ENST00000397099 RPEQ96AT9 228 aa11.21□□□□□ -0.61
SEC13-204ENST00000397099 ORAI1Q96D31 301 aa11.21□□□□□ -0.61
SEC13-204ENST00000397099 RAB26Q9ULW5 256 aa11.21□□□□□ -0.61
SEC13-204ENST00000397099 MAGEA13PA6NCF6 341 aa11.2□□□□□ -0.62
SEC13-204ENST00000397099 AIPO00170 330 aa11.2□□□□□ -0.62
SEC13-204ENST00000397099 PIN1P1O15428 100 aa11.2□□□□□ -0.62
SEC13-204ENST00000397099 SPINT2O43291 252 aa11.2□□□□□ -0.62
SEC13-204ENST00000397099 CRTAPO75718 401 aaPredicted RBP11.2□□□□□ -0.62
SEC13-204ENST00000397099 SC5DO75845 299 aa11.2□□□□□ -0.62
SEC13-204ENST00000397099 BPNT1O95861 308 aa11.2□□□□□ -0.62
SEC13-204ENST00000397099 LPLP06858 475 aa11.2□□□□□ -0.62
SEC13-204ENST00000397099 CRHBPP24387 322 aa11.2□□□□□ -0.62
SEC13-204ENST00000397099 IL3RAP26951 378 aa11.2□□□□□ -0.62
SEC13-204ENST00000397099 PSMD7P51665 324 aa11.2□□□□□ -0.62
SEC13-204ENST00000397099 MLLT11Q13015 90 aaPredicted RBP11.2□□□□□ -0.62
SEC13-204ENST00000397099 HSD17B12Q53GQ0 312 aa11.2□□□□□ -0.62
SEC13-204ENST00000397099 ARSJQ5FYB0 599 aaPredicted RBP11.2□□□□□ -0.62
SEC13-204ENST00000397099 RAB12Q6IQ22 244 aa11.2□□□□□ -0.62
SEC13-204ENST00000397099 CCBE1Q6UXH8 406 aaPredicted RBP11.2□□□□□ -0.62
SEC13-204ENST00000397099 IZUMO2Q6UXV1 221 aa11.2□□□□□ -0.62
SEC13-204ENST00000397099 KCNG3Q8TAE7 436 aa11.2□□□□□ -0.62
SEC13-204ENST00000397099 CFHR4Q92496 578 aa11.2□□□□□ -0.62
SEC13-204ENST00000397099 TOMM40LQ969M1 308 aa11.2□□□□□ -0.62
SEC13-204ENST00000397099 Q96M66 194 aa11.2□□□□□ -0.62
SEC13-204ENST00000397099 OR5M11Q96RB7 305 aa11.2□□□□□ -0.62
SEC13-204ENST00000397099 TMED9Q9BVK6 235 aa11.2□□□□□ -0.62
SEC13-204ENST00000397099 SELENOIQ9C0D9 397 aa11.2□□□□□ -0.62
SEC13-204ENST00000397099 ZNF702PQ9H963 129 aa11.2□□□□□ -0.62
SEC13-204ENST00000397099 ETAA1Q9NY74 926 aa11.2□□□□□ -0.62
SEC13-204ENST00000397099 PSG11Q9UQ72 335 aa11.2□□□□□ -0.62
SEC13-204ENST00000397099 PEX16Q9Y5Y5 336 aa11.2□□□□□ -0.62
SEC13-204ENST00000397099 WNK1Q9H4A3 2382 aa11.2□□□□□ -0.62
SEC13-204ENST00000397099 MRPS14O60783 128 aaKnown RBP11.19□□□□□ -0.62
SEC13-204ENST00000397099 OR2F2O95006 317 aa11.19□□□□□ -0.62
SEC13-204ENST00000397099 MT-ND4P03905 459 aa11.19□□□□□ -0.62
SEC13-204ENST00000397099 UCHL1P09936 223 aa11.19□□□□□ -0.62
SEC13-204ENST00000397099 SSTR5P35346 364 aa11.19□□□□□ -0.62
SEC13-204ENST00000397099 GDNFP39905 211 aa11.19□□□□□ -0.62
SEC13-204ENST00000397099 PDLIM3Q53GG5 364 aaPredicted RBP11.19□□□□□ -0.62
SEC13-204ENST00000397099 C1orf100Q5SVJ3 147 aa11.19□□□□□ -0.62
SEC13-204ENST00000397099 STEAP3Q658P3 488 aa11.19□□□□□ -0.62
SEC13-204ENST00000397099 CEACAM19Q7Z692 300 aa11.19□□□□□ -0.62
SEC13-204ENST00000397099 TMEM219Q86XT9 240 aa11.19□□□□□ -0.62
SEC13-204ENST00000397099 GAPTQ8N292 157 aa11.19□□□□□ -0.62
SEC13-204ENST00000397099 LINC00311Q8N616 119 aa11.19□□□□□ -0.62
SEC13-204ENST00000397099 KLHDC1Q8N7A1 406 aa11.19□□□□□ -0.62
SEC13-204ENST00000397099 OR10X1Q8NGY0 326 aa11.19□□□□□ -0.62
SEC13-204ENST00000397099 ARL11Q969Q4 196 aa11.19□□□□□ -0.62
SEC13-204ENST00000397099 RBM14Q96PK6 669 aaKnown RBP11.19□□□□□ -0.62
SEC13-204ENST00000397099 CCDC90BQ9GZT6 254 aa11.19□□□□□ -0.62
SEC13-204ENST00000397099 Q9H521 79 aa11.19□□□□□ -0.62
SEC13-204ENST00000397099 TRAPPC2LQ9UL33 140 aa11.19□□□□□ -0.62
SEC13-204ENST00000397099 LRRC42Q9Y546 428 aa11.19□□□□□ -0.62
SEC13-204ENST00000397099 NOTCH1P46531 2555 aa11.19□□□□□ -0.62
SEC13-204ENST00000397099 TXNL1O43396 289 aa11.18□□□□□ -0.62
SEC13-204ENST00000397099 PDCD6O75340 191 aa11.18□□□□□ -0.62
SEC13-204ENST00000397099 CSF1P09603 554 aa11.18□□□□□ -0.62
SEC13-204ENST00000397099 CD37P11049 281 aa11.18□□□□□ -0.62
SEC13-204ENST00000397099 CPEP16870 476 aa11.18□□□□□ -0.62
SEC13-204ENST00000397099 VDAC2P45880 294 aaPredicted RBP11.18□□□□□ -0.62
SEC13-204ENST00000397099 EMX1Q04741 257 aaPredicted RBP11.18□□□□□ -0.62
SEC13-204ENST00000397099 LIPKQ5VXJ0 399 aa11.18□□□□□ -0.62
SEC13-204ENST00000397099 BAIAP2L2Q6UXY1 529 aa11.18□□□□□ -0.62
SEC13-204ENST00000397099 OR6M1Q8NGM8 313 aa11.18□□□□□ -0.62
SEC13-204ENST00000397099 OCSTAMPQ9BR26 566 aa11.18□□□□□ -0.62
SEC13-204ENST00000397099 SLC25A33Q9BSK2 321 aa11.18□□□□□ -0.62
SEC13-204ENST00000397099 ACOT13Q9NPJ3 140 aa11.18□□□□□ -0.62
SEC13-204ENST00000397099 SERTAD4Q9NUC0 356 aa11.18□□□□□ -0.62
SEC13-204ENST00000397099 A0A1W2PP11 408 aa11.17□□□□□ -0.62
SEC13-204ENST00000397099 FAM172BPA6NC97 362 aa11.17□□□□□ -0.62
SEC13-204ENST00000397099 FAM90A9PA6NNJ1 464 aa11.17□□□□□ -0.62
SEC13-204ENST00000397099 C15orf65H3BRN8 121 aa11.17□□□□□ -0.62
SEC13-204ENST00000397099 CCRL2O00421 344 aa11.17□□□□□ -0.62
SEC13-204ENST00000397099 SDCBPO00560 298 aaPredicted RBP11.17□□□□□ -0.62
SEC13-204ENST00000397099 SLC22A1O15245 554 aa11.17□□□□□ -0.62
SEC13-204ENST00000397099 TSPAN15O95858 294 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms