RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 HIST3H2BBQ8N257 126 aa12.66□□□□□ -0.38
CCNF-202ENST00000397066 CACNG5Q9UF02 275 aa12.66□□□□□ -0.38
CCNF-202ENST00000397066 FER1L5A0AVI2 2057 aa12.66□□□□□ -0.38
CCNF-202ENST00000397066 IGHV5-10-1A0A0J9YXX1 117 aa12.66□□□□□ -0.38
CCNF-202ENST00000397066 TOX3O15405 576 aaPredicted RBP12.66□□□□□ -0.38
CCNF-202ENST00000397066 TMEM50AO95807 157 aa12.66□□□□□ -0.38
CCNF-202ENST00000397066 HBG1P69891 147 aa12.66□□□□□ -0.38
CCNF-202ENST00000397066 HBG2P69892 147 aa12.66□□□□□ -0.38
CCNF-202ENST00000397066 PRDX4Q13162 271 aa12.66□□□□□ -0.38
CCNF-202ENST00000397066 ZNF845Q96IR2 970 aaPredicted RBP12.66□□□□□ -0.38
CCNF-202ENST00000397066 RPRMQ9NS64 109 aa12.66□□□□□ -0.38
CCNF-202ENST00000397066 LAMP3Q9UQV4 416 aa12.66□□□□□ -0.38
CCNF-202ENST00000397066 hCG_38984A0A1B0GV85 526 aa12.65□□□□□ -0.38
CCNF-202ENST00000397066 PNRC1Q12796 327 aaPredicted RBP12.65□□□□□ -0.38
CCNF-202ENST00000397066 CLN3Q13286 438 aa12.65□□□□□ -0.38
CCNF-202ENST00000397066 ZNF468Q5VIY5 522 aaPredicted RBP12.65□□□□□ -0.38
CCNF-202ENST00000397066 UBALD1Q8TB05 177 aa12.65□□□□□ -0.38
CCNF-202ENST00000397066 LHX4Q969G2 390 aa12.65□□□□□ -0.38
CCNF-202ENST00000397066 C5orf49A4QMS7 147 aa12.65□□□□□ -0.38
CCNF-202ENST00000397066 PSG2P11465 335 aa12.65□□□□□ -0.38
CCNF-202ENST00000397066 PKIAP61925 76 aa12.65□□□□□ -0.38
CCNF-202ENST00000397066 H1FOOQ8IZA3 346 aaPredicted RBP12.65□□□□□ -0.38
CCNF-202ENST00000397066 OR13D1Q8NGV5 346 aa12.65□□□□□ -0.38
CCNF-202ENST00000397066 WNT5BQ9H1J7 359 aa12.65□□□□□ -0.38
CCNF-202ENST00000397066 Q9N2K0 584 aa12.65□□□□□ -0.38
CCNF-202ENST00000397066 PLSCR2Q9NRY7 297 aa12.65□□□□□ -0.38
CCNF-202ENST00000397066 RNF224P0DH78 156 aa12.65□□□□□ -0.38
CCNF-202ENST00000397066 DDTP30046 118 aa12.65□□□□□ -0.38
CCNF-202ENST00000397066 FOXO1Q12778 655 aa12.65□□□□□ -0.38
CCNF-202ENST00000397066 SSX2Q16385 188 aa12.65□□□□□ -0.38
CCNF-202ENST00000397066 NCR3LG1Q68D85 454 aa12.65□□□□□ -0.38
CCNF-202ENST00000397066 RAB40CQ96S21 281 aa12.65□□□□□ -0.38
CCNF-202ENST00000397066 PRRG4Q9BZD6 226 aa12.65□□□□□ -0.38
CCNF-202ENST00000397066 SEMA5BQ9P283 1151 aa12.65□□□□□ -0.38
CCNF-202ENST00000397066 IL36RNQ9UBH0 155 aa12.65□□□□□ -0.38
CCNF-202ENST00000397066 A0A1W2PQM1 296 aa12.65□□□□□ -0.39
CCNF-202ENST00000397066 MRPL33O75394 65 aaKnown RBP12.65□□□□□ -0.39
CCNF-202ENST00000397066 CYB5R3P00387 301 aaPredicted RBP12.65□□□□□ -0.39
CCNF-202ENST00000397066 ID3Q02535 119 aa12.65□□□□□ -0.39
CCNF-202ENST00000397066 EXT1Q16394 746 aa12.65□□□□□ -0.39
CCNF-202ENST00000397066 FGFBP3Q8TAT2 258 aa12.65□□□□□ -0.39
CCNF-202ENST00000397066 TECTBQ96PL2 329 aa12.65□□□□□ -0.39
CCNF-202ENST00000397066 SF3B5Q9BWJ5 86 aaKnown RBP12.65□□□□□ -0.39
CCNF-202ENST00000397066 TGOLN2O43493 480 aa12.64□□□□□ -0.39
CCNF-202ENST00000397066 PGLYRP1O75594 196 aaPredicted RBP12.64□□□□□ -0.39
CCNF-202ENST00000397066 MAS1LP35410 378 aa12.64□□□□□ -0.39
CCNF-202ENST00000397066 DPPA3Q6W0C5 159 aa12.64□□□□□ -0.39
CCNF-202ENST00000397066 M1APQ8TC57 530 aa12.64□□□□□ -0.39
CCNF-202ENST00000397066 GPR146Q96CH1 333 aa12.64□□□□□ -0.39
CCNF-202ENST00000397066 TRIOO75962 3097 aa12.64□□□□□ -0.39
CCNF-202ENST00000397066 MAP1LC3B2A6NCE7 125 aa12.64□□□□□ -0.39
CCNF-202ENST00000397066 GDF1P27539 372 aa12.64□□□□□ -0.39
CCNF-202ENST00000397066 WIPI1Q5MNZ9 446 aaPredicted RBP12.64□□□□□ -0.39
CCNF-202ENST00000397066 FOXL2NBQ6ZUU3 175 aa12.64□□□□□ -0.39
CCNF-202ENST00000397066 ZDHHC23Q8IYP9 409 aa12.64□□□□□ -0.39
CCNF-202ENST00000397066 RNF138Q8WVD3 245 aa12.64□□□□□ -0.39
CCNF-202ENST00000397066 ABHD14BQ96IU4 210 aa12.64□□□□□ -0.39
CCNF-202ENST00000397066 MAP1LC3BQ9GZQ8 125 aa12.64□□□□□ -0.39
CCNF-202ENST00000397066 IL36GQ9NZH8 169 aa12.64□□□□□ -0.39
CCNF-202ENST00000397066 FAM186AA6NE01 2351 aa12.64□□□□□ -0.39
CCNF-202ENST00000397066 OPN1MWP04001 364 aa12.64□□□□□ -0.39
CCNF-202ENST00000397066 OPN1MW2P0DN77 364 aa12.64□□□□□ -0.39
CCNF-202ENST00000397066 OPN1MW3P0DN78 364 aa12.64□□□□□ -0.39
CCNF-202ENST00000397066 F2RP25116 425 aa12.64□□□□□ -0.39
CCNF-202ENST00000397066 UCP1P25874 307 aa12.64□□□□□ -0.39
CCNF-202ENST00000397066 PCOLCEQ15113 449 aa12.64□□□□□ -0.39
CCNF-202ENST00000397066 CLDN23Q96B33 292 aa12.64□□□□□ -0.39
CCNF-202ENST00000397066 GPR87Q9BY21 358 aa12.64□□□□□ -0.39
CCNF-202ENST00000397066 NOSIPQ9Y314 301 aaKnown RBP12.64□□□□□ -0.39
CCNF-202ENST00000397066 DUXBA0A1W2PPF3 345 aa12.63□□□□□ -0.39
CCNF-202ENST00000397066 PPP5D1E7EU14 171 aa12.63□□□□□ -0.39
CCNF-202ENST00000397066 TUSC2O75896 110 aa12.63□□□□□ -0.39
CCNF-202ENST00000397066 OTX2P32243 289 aa12.63□□□□□ -0.39
CCNF-202ENST00000397066 WDR25Q64LD2 544 aaPredicted RBP12.63□□□□□ -0.39
CCNF-202ENST00000397066 OR10A7Q8NGE5 316 aa12.63□□□□□ -0.39
CCNF-202ENST00000397066 OR1K1Q8NGR3 316 aa12.63□□□□□ -0.39
CCNF-202ENST00000397066 OR10D3Q8NH80 312 aa12.63□□□□□ -0.39
CCNF-202ENST00000397066 DUSP23Q9BVJ7 150 aa12.63□□□□□ -0.39
CCNF-202ENST00000397066 FSCN3Q9NQT6 498 aa12.63□□□□□ -0.39
CCNF-202ENST00000397066 TRAV39A0A0B4J263 110 aa12.63□□□□□ -0.39
CCNF-202ENST00000397066 H7BYZ3 331 aa12.63□□□□□ -0.39
CCNF-202ENST00000397066 WDR1O75083 606 aa12.63□□□□□ -0.39
CCNF-202ENST00000397066 CLDN1O95832 211 aa12.63□□□□□ -0.39
CCNF-202ENST00000397066 ERVS71-1P61550 626 aa12.63□□□□□ -0.39
CCNF-202ENST00000397066 ASCL4Q6XD76 172 aa12.63□□□□□ -0.39
CCNF-202ENST00000397066 BEND4Q6ZU67 534 aa12.63□□□□□ -0.39
CCNF-202ENST00000397066 ZNF488Q96MN9 340 aa12.63□□□□□ -0.39
CCNF-202ENST00000397066 PCED1AQ9H1Q7 454 aa12.63□□□□□ -0.39
CCNF-202ENST00000397066 VSIRQ9H7M9 311 aa12.63□□□□□ -0.39
CCNF-202ENST00000397066 RNF150Q9ULK6 438 aa12.63□□□□□ -0.39
CCNF-202ENST00000397066 UBE2L5PA0A1B0GUS4 154 aa12.63□□□□□ -0.39
CCNF-202ENST00000397066 H0Y980 276 aa12.63□□□□□ -0.39
CCNF-202ENST00000397066 SYNGR2O43760 224 aa12.63□□□□□ -0.39
CCNF-202ENST00000397066 ZNF737O75373 536 aa12.63□□□□□ -0.39
CCNF-202ENST00000397066 OR8G1Q15617 311 aa12.63□□□□□ -0.39
CCNF-202ENST00000397066 NMSQ5H8A3 153 aa12.63□□□□□ -0.39
CCNF-202ENST00000397066 OR5D13Q8NGL4 314 aa12.63□□□□□ -0.39
CCNF-202ENST00000397066 ABHD5Q8WTS1 349 aa12.63□□□□□ -0.39
CCNF-202ENST00000397066 ABHD3Q8WU67 409 aa12.63□□□□□ -0.39
CCNF-202ENST00000397066 GPR35Q9HC97 309 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms