RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 ZBTB25P24278 435 aa12.97□□□□□ -0.33
MCF2L-205ENST00000397017 NBL1P41271 181 aa12.97□□□□□ -0.33
MCF2L-205ENST00000397017 ANKRD55Q3KP44 614 aa12.97□□□□□ -0.33
MCF2L-205ENST00000397017 MED30Q96HR3 178 aa12.97□□□□□ -0.33
MCF2L-205ENST00000397017 ABHD14BQ96IU4 210 aa12.97□□□□□ -0.33
MCF2L-205ENST00000397017 SAP30LQ9HAJ7 183 aa12.97□□□□□ -0.33
MCF2L-205ENST00000397017 LRP5LA4QPB2 252 aa12.97□□□□□ -0.33
MCF2L-205ENST00000397017 CXCL2P19875 107 aa12.97□□□□□ -0.33
MCF2L-205ENST00000397017 NSUN5P2Q63ZY6 315 aa12.97□□□□□ -0.33
MCF2L-205ENST00000397017 SPICQ8N5J4 248 aa12.97□□□□□ -0.33
MCF2L-205ENST00000397017 FAM213BQ8TBF2 198 aa12.97□□□□□ -0.33
MCF2L-205ENST00000397017 GPR132Q9UNW8 380 aa12.97□□□□□ -0.33
MCF2L-205ENST00000397017 IGHV2OR16-5A0A0B4J2B6 119 aa12.97□□□□□ -0.33
MCF2L-205ENST00000397017 LOC390937A0A1W2PQ73 354 aa12.97□□□□□ -0.33
MCF2L-205ENST00000397017 ST8SIA5O15466 376 aa12.97□□□□□ -0.33
MCF2L-205ENST00000397017 TSPAN15O95858 294 aa12.97□□□□□ -0.33
MCF2L-205ENST00000397017 CCL1P22362 96 aa12.97□□□□□ -0.33
MCF2L-205ENST00000397017 GLIPR1P48060 266 aa12.97□□□□□ -0.33
MCF2L-205ENST00000397017 ZBTB37Q5TC79 503 aa12.97□□□□□ -0.33
MCF2L-205ENST00000397017 CCDC28AQ8IWP9 274 aa12.97□□□□□ -0.33
MCF2L-205ENST00000397017 LYG1Q8N1E2 194 aa12.97□□□□□ -0.33
MCF2L-205ENST00000397017 RBMXL3Q8N7X1 1067 aaKnown RBP12.97□□□□□ -0.33
MCF2L-205ENST00000397017 ZNF709Q8N972 641 aa12.97□□□□□ -0.33
MCF2L-205ENST00000397017 OR1L1Q8NH94 360 aa12.97□□□□□ -0.33
MCF2L-205ENST00000397017 MITD1Q8WV92 249 aa12.97□□□□□ -0.33
MCF2L-205ENST00000397017 TSNAXQ99598 290 aaKnown RBP12.97□□□□□ -0.33
MCF2L-205ENST00000397017 RASL12Q9NYN1 266 aa12.97□□□□□ -0.33
MCF2L-205ENST00000397017 TUBAL3A6NHL2 446 aa12.96□□□□□ -0.33
MCF2L-205ENST00000397017 RPL23AP62750 156 aaKnown RBP12.96□□□□□ -0.33
MCF2L-205ENST00000397017 NHLH1Q02575 133 aa12.96□□□□□ -0.33
MCF2L-205ENST00000397017 RIMS4Q9H426 269 aaPredicted RBP12.96□□□□□ -0.33
MCF2L-205ENST00000397017 MALRD1Q5VYJ5 2156 aa12.96□□□□□ -0.33
MCF2L-205ENST00000397017 SS18L1O75177 396 aaPredicted RBP12.96□□□□□ -0.33
MCF2L-205ENST00000397017 IFNA10P01566 189 aa12.96□□□□□ -0.33
MCF2L-205ENST00000397017 GYPAP02724 150 aa12.96□□□□□ -0.33
MCF2L-205ENST00000397017 IFNA4P05014 189 aa12.96□□□□□ -0.33
MCF2L-205ENST00000397017 OTX1P32242 354 aaPredicted RBP12.96□□□□□ -0.33
MCF2L-205ENST00000397017 PLGLAQ15195 96 aa12.96□□□□□ -0.33
MCF2L-205ENST00000397017 TBR1Q16650 682 aa12.96□□□□□ -0.33
MCF2L-205ENST00000397017 OVCH2Q7RTZ1 564 aa12.96□□□□□ -0.33
MCF2L-205ENST00000397017 MED12LQ86YW9 2145 aa12.96□□□□□ -0.33
MCF2L-205ENST00000397017 STOML3Q8TAV4 291 aa12.96□□□□□ -0.33
MCF2L-205ENST00000397017 ST8SIA2Q92186 375 aa12.96□□□□□ -0.33
MCF2L-205ENST00000397017 PIK3IP1Q96FE7 263 aa12.96□□□□□ -0.33
MCF2L-205ENST00000397017 EPG5Q9HCE0 2579 aa12.96□□□□□ -0.33
MCF2L-205ENST00000397017 OR4A8P0C604 315 aa12.96□□□□□ -0.34
MCF2L-205ENST00000397017 COX5BP10606 129 aa12.96□□□□□ -0.34
MCF2L-205ENST00000397017 PRB3Q04118 309 aaPredicted RBP12.96□□□□□ -0.34
MCF2L-205ENST00000397017 MPV17LQ2QL34 196 aa12.96□□□□□ -0.34
MCF2L-205ENST00000397017 GTF3AQ92664 365 aaKnown RBP12.96□□□□□ -0.34
MCF2L-205ENST00000397017 RCL1Q9Y2P8 373 aaKnown RBP12.96□□□□□ -0.34
MCF2L-205ENST00000397017 FAM24AA6NFZ4 105 aa12.95□□□□□ -0.34
MCF2L-205ENST00000397017 NKX6-3A6NJ46 265 aa12.95□□□□□ -0.34
MCF2L-205ENST00000397017 M6PRP20645 277 aa12.95□□□□□ -0.34
MCF2L-205ENST00000397017 PRDX2P32119 198 aa12.95□□□□□ -0.34
MCF2L-205ENST00000397017 ECI1P42126 302 aa12.95□□□□□ -0.34
MCF2L-205ENST00000397017 NUBP1P53384 320 aa12.95□□□□□ -0.34
MCF2L-205ENST00000397017 TMEM211Q6ICI0 200 aa12.95□□□□□ -0.34
MCF2L-205ENST00000397017 ZCCHC14Q8WYQ9 949 aaKnown RBP12.95□□□□□ -0.34
MCF2L-205ENST00000397017 OR10C1Q96KK4 312 aa12.95□□□□□ -0.34
MCF2L-205ENST00000397017 KCNJ16Q9NPI9 418 aa12.95□□□□□ -0.34
MCF2L-205ENST00000397017 PROB1E7EW31 1015 aa12.95□□□□□ -0.34
MCF2L-205ENST00000397017 MPPED1O15442 326 aa12.95□□□□□ -0.34
MCF2L-205ENST00000397017 FCGR3BO75015 233 aa12.95□□□□□ -0.34
MCF2L-205ENST00000397017 TNFRSF1AP19438 455 aa12.95□□□□□ -0.34
MCF2L-205ENST00000397017 PRAMEF5Q5TYX0 476 aa12.95□□□□□ -0.34
MCF2L-205ENST00000397017 H2BFWTQ7Z2G1 175 aa12.95□□□□□ -0.34
MCF2L-205ENST00000397017 SPAG16Q8N0X2 631 aa12.95□□□□□ -0.34
MCF2L-205ENST00000397017 OR5T1Q8NG75 326 aa12.95□□□□□ -0.34
MCF2L-205ENST00000397017 MARS2Q96GW9 593 aaKnown RBP12.95□□□□□ -0.34
MCF2L-205ENST00000397017 HEYLQ9NQ87 328 aaPredicted RBP12.95□□□□□ -0.34
MCF2L-205ENST00000397017 CRHP06850 196 aa12.95□□□□□ -0.34
MCF2L-205ENST00000397017 CD3EP07766 207 aa12.95□□□□□ -0.34
MCF2L-205ENST00000397017 AKR1C8PQ5T2L2 129 aa12.95□□□□□ -0.34
MCF2L-205ENST00000397017 ANGPTL6Q8NI99 470 aa12.95□□□□□ -0.34
MCF2L-205ENST00000397017 FAM57AQ8TBR7 257 aa12.95□□□□□ -0.34
MCF2L-205ENST00000397017 MRGPRFQ96AM1 343 aa12.95□□□□□ -0.34
MCF2L-205ENST00000397017 NKX2-6A6NCS4 301 aa12.94□□□□□ -0.34
MCF2L-205ENST00000397017 SNAPC5O75971 98 aa12.94□□□□□ -0.34
MCF2L-205ENST00000397017 CTSDP07339 412 aaPredicted RBP12.94□□□□□ -0.34
MCF2L-205ENST00000397017 SSTR5P35346 364 aa12.94□□□□□ -0.34
MCF2L-205ENST00000397017 VAX1Q5SQQ9 334 aa12.94□□□□□ -0.34
MCF2L-205ENST00000397017 Q6ZS92 163 aa12.94□□□□□ -0.34
MCF2L-205ENST00000397017 CLCF1Q9UBD9 225 aa12.94□□□□□ -0.34
MCF2L-205ENST00000397017 CACNG5Q9UF02 275 aa12.94□□□□□ -0.34
MCF2L-205ENST00000397017 DTYMKP23919 212 aa12.94□□□□□ -0.34
MCF2L-205ENST00000397017 UBA52P62987 128 aaKnown RBP12.94□□□□□ -0.34
MCF2L-205ENST00000397017 F8W036 122 aa12.94□□□□□ -0.34
MCF2L-205ENST00000397017 ID4P47928 161 aa12.94□□□□□ -0.34
MCF2L-205ENST00000397017 RAB2AP61019 212 aa12.94□□□□□ -0.34
MCF2L-205ENST00000397017 BLOC1S1P78537 153 aa12.94□□□□□ -0.34
MCF2L-205ENST00000397017 RTP5Q14D33 572 aa12.94□□□□□ -0.34
MCF2L-205ENST00000397017 KCNRGQ8N5I3 272 aa12.94□□□□□ -0.34
MCF2L-205ENST00000397017 SLC35G3Q8N808 338 aa12.94□□□□□ -0.34
MCF2L-205ENST00000397017 FAM117AQ9C073 453 aa12.94□□□□□ -0.34
MCF2L-205ENST00000397017 DOCK11Q5JSL3 2073 aa12.94□□□□□ -0.34
MCF2L-205ENST00000397017 ARPC4-TTLL3A0A0A6YYG9 625 aa12.94□□□□□ -0.34
MCF2L-205ENST00000397017 LDLRAD4O15165 306 aa12.94□□□□□ -0.34
MCF2L-205ENST00000397017 ELLP55199 621 aaPredicted RBP12.94□□□□□ -0.34
MCF2L-205ENST00000397017 SIGIRRQ6IA17 410 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms