RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 HSPB6O14558 160 aa13.7□□□□□ -0.22
EXOSC3-202ENST00000396521 IGHV3-7P01780 117 aa13.7□□□□□ -0.22
EXOSC3-202ENST00000396521 IGF1P05019 195 aa13.7□□□□□ -0.22
EXOSC3-202ENST00000396521 OR8U8P0C7N1 319 aa13.7□□□□□ -0.22
EXOSC3-202ENST00000396521 SOX6P35712 828 aa13.7□□□□□ -0.22
EXOSC3-202ENST00000396521 ALKBH1Q13686 389 aaKnown RBP13.7□□□□□ -0.22
EXOSC3-202ENST00000396521 DEFB136Q30KP8 78 aa13.7□□□□□ -0.22
EXOSC3-202ENST00000396521 ZNF260Q3ZCT1 412 aa13.7□□□□□ -0.22
EXOSC3-202ENST00000396521 SLC25A30Q5SVS4 291 aa13.7□□□□□ -0.22
EXOSC3-202ENST00000396521 FAM27D1Q5T7N8 215 aa13.7□□□□□ -0.22
EXOSC3-202ENST00000396521 MEDAGQ5VYS4 303 aa13.7□□□□□ -0.22
EXOSC3-202ENST00000396521 ZNF429Q86V71 674 aa13.7□□□□□ -0.22
EXOSC3-202ENST00000396521 OR51A4Q8NGJ6 313 aa13.7□□□□□ -0.22
EXOSC3-202ENST00000396521 NR1H4Q96RI1 486 aaPredicted RBP13.7□□□□□ -0.22
EXOSC3-202ENST00000396521 S1PR3Q99500 378 aa13.7□□□□□ -0.22
EXOSC3-202ENST00000396521 ASCL2Q99929 193 aa13.7□□□□□ -0.22
EXOSC3-202ENST00000396521 IFT22Q9H7X7 185 aa13.7□□□□□ -0.22
EXOSC3-202ENST00000396521 IMPAD1Q9NX62 359 aa13.7□□□□□ -0.22
EXOSC3-202ENST00000396521 LINC01548A6NM66 108 aa13.69□□□□□ -0.22
EXOSC3-202ENST00000396521 J3QRE1 110 aa13.69□□□□□ -0.22
EXOSC3-202ENST00000396521 PSMB8P28062 276 aa13.69□□□□□ -0.22
EXOSC3-202ENST00000396521 RUNX1Q01196 453 aa13.69□□□□□ -0.22
EXOSC3-202ENST00000396521 CFHR3Q02985 330 aa13.69□□□□□ -0.22
EXOSC3-202ENST00000396521 RSU1Q15404 277 aa13.69□□□□□ -0.22
EXOSC3-202ENST00000396521 LTC4SQ16873 150 aa13.69□□□□□ -0.22
EXOSC3-202ENST00000396521 TMEM30BQ3MIR4 351 aa13.69□□□□□ -0.22
EXOSC3-202ENST00000396521 UBE2E2Q96LR5 201 aa13.69□□□□□ -0.22
EXOSC3-202ENST00000396521 PLSCR3Q9NRY6 295 aa13.69□□□□□ -0.22
EXOSC3-202ENST00000396521 TMEM30CPA0ZSE6 113 aa13.68□□□□□ -0.22
EXOSC3-202ENST00000396521 TMEM212A6NML5 194 aa13.68□□□□□ -0.22
EXOSC3-202ENST00000396521 ORC5O43913 435 aa13.68□□□□□ -0.22
EXOSC3-202ENST00000396521 RAB3AP20336 220 aa13.68□□□□□ -0.22
EXOSC3-202ENST00000396521 SSTR5P35346 364 aa13.68□□□□□ -0.22
EXOSC3-202ENST00000396521 NHLRC3Q5JS37 347 aa13.68□□□□□ -0.22
EXOSC3-202ENST00000396521 TMEM65Q6PI78 240 aa13.68□□□□□ -0.22
EXOSC3-202ENST00000396521 ASCL4Q6XD76 172 aa13.68□□□□□ -0.22
EXOSC3-202ENST00000396521 AMIGO2Q86SJ2 522 aa13.68□□□□□ -0.22
EXOSC3-202ENST00000396521 LINC00596Q86U02 117 aa13.68□□□□□ -0.22
EXOSC3-202ENST00000396521 TMEM104Q8NE00 496 aa13.68□□□□□ -0.22
EXOSC3-202ENST00000396521 OR11H1Q8NG94 326 aa13.68□□□□□ -0.22
EXOSC3-202ENST00000396521 OR10AC1Q8NH08 325 aa13.68□□□□□ -0.22
EXOSC3-202ENST00000396521 RTN4IP1Q8WWV3 396 aaPredicted RBP13.68□□□□□ -0.22
EXOSC3-202ENST00000396521 ST6GALNAC6Q969X2 333 aa13.68□□□□□ -0.22
EXOSC3-202ENST00000396521 RNFT2Q96EX2 444 aa13.68□□□□□ -0.22
EXOSC3-202ENST00000396521 PELI1Q96FA3 418 aa13.68□□□□□ -0.22
EXOSC3-202ENST00000396521 CENPNQ96H22 339 aaPredicted RBP13.68□□□□□ -0.22
EXOSC3-202ENST00000396521 GPER1Q99527 375 aa13.68□□□□□ -0.22
EXOSC3-202ENST00000396521 DPCDQ9BVM2 203 aaPredicted RBP13.68□□□□□ -0.22
EXOSC3-202ENST00000396521 S100A14Q9HCY8 104 aa13.68□□□□□ -0.22
EXOSC3-202ENST00000396521 PAK1IP1Q9NWT1 392 aaPredicted RBP13.68□□□□□ -0.22
EXOSC3-202ENST00000396521 SAC3D1A6NKF1 404 aa13.67□□□□□ -0.22
EXOSC3-202ENST00000396521 J3QLW9 94 aa13.67□□□□□ -0.22
EXOSC3-202ENST00000396521 LYL1P12980 280 aa13.67□□□□□ -0.22
EXOSC3-202ENST00000396521 ZNF19P17023 458 aa13.67□□□□□ -0.22
EXOSC3-202ENST00000396521 STEAP3Q658P3 488 aa13.67□□□□□ -0.22
EXOSC3-202ENST00000396521 SYS1Q8N2H4 156 aa13.67□□□□□ -0.22
EXOSC3-202ENST00000396521 FAM71E2Q8N5Q1 922 aa13.67□□□□□ -0.22
EXOSC3-202ENST00000396521 PLPPR1Q8TBJ4 325 aa13.67□□□□□ -0.22
EXOSC3-202ENST00000396521 MYOZ3Q8TDC0 251 aa13.67□□□□□ -0.22
EXOSC3-202ENST00000396521 TNFAIP8L1Q8WVP5 186 aa13.67□□□□□ -0.22
EXOSC3-202ENST00000396521 ARL11Q969Q4 196 aa13.67□□□□□ -0.22
EXOSC3-202ENST00000396521 RCHY1Q96PM5 261 aa13.67□□□□□ -0.22
EXOSC3-202ENST00000396521 JAM3Q9BX67 310 aa13.67□□□□□ -0.22
EXOSC3-202ENST00000396521 ZMAT4Q9H898 229 aa13.67□□□□□ -0.22
EXOSC3-202ENST00000396521 DHDHQ9UQ10 334 aa13.67□□□□□ -0.22
EXOSC3-202ENST00000396521 IGHV3-72A0A0B4J1Y9 119 aa13.66□□□□□ -0.22
EXOSC3-202ENST00000396521 H3BNX3 289 aa13.66□□□□□ -0.22
EXOSC3-202ENST00000396521 SDCBPO00560 298 aaPredicted RBP13.66□□□□□ -0.22
EXOSC3-202ENST00000396521 LY86O95711 162 aa13.66□□□□□ -0.22
EXOSC3-202ENST00000396521 POLR2IP36954 125 aaKnown RBP13.66□□□□□ -0.22
EXOSC3-202ENST00000396521 REG1BP48304 166 aa13.66□□□□□ -0.22
EXOSC3-202ENST00000396521 ZNF137PP52743 207 aa13.66□□□□□ -0.22
EXOSC3-202ENST00000396521 SNRPGP62308 76 aaKnown RBP13.66□□□□□ -0.22
EXOSC3-202ENST00000396521 ZNF616Q08AN1 781 aa13.66□□□□□ -0.22
EXOSC3-202ENST00000396521 SUMF2Q8NBJ7 301 aa13.66□□□□□ -0.22
EXOSC3-202ENST00000396521 C4orf36Q96KX1 117 aa13.66□□□□□ -0.22
EXOSC3-202ENST00000396521 KCTD7Q96MP8 289 aa13.66□□□□□ -0.22
EXOSC3-202ENST00000396521 PALMDQ9NP74 551 aa13.66□□□□□ -0.22
EXOSC3-202ENST00000396521 GFOD1Q9NXC2 390 aa13.66□□□□□ -0.22
EXOSC3-202ENST00000396521 IL36GQ9NZH8 169 aa13.66□□□□□ -0.22
EXOSC3-202ENST00000396521 VSIG4Q9Y279 399 aa13.66□□□□□ -0.22
EXOSC3-202ENST00000396521 EXOGQ9Y2C4 368 aaKnown RBP13.66□□□□□ -0.22
EXOSC3-202ENST00000396521 TENM2Q9NT68 2774 aa13.66□□□□□ -0.22
EXOSC3-202ENST00000396521 BAG2O95816 211 aa13.65□□□□□ -0.22
EXOSC3-202ENST00000396521 GALEQ14376 348 aa13.65□□□□□ -0.22
EXOSC3-202ENST00000396521 ZNF529Q6P280 563 aa13.65□□□□□ -0.22
EXOSC3-202ENST00000396521 OR1N2Q8NGR9 330 aa13.65□□□□□ -0.22
EXOSC3-202ENST00000396521 OR5AK2Q8NH90 309 aa13.65□□□□□ -0.22
EXOSC3-202ENST00000396521 OAZ3Q9UMX2 235 aa13.65□□□□□ -0.22
EXOSC3-202ENST00000396521 ST3GAL6Q9Y274 331 aa13.65□□□□□ -0.22
EXOSC3-202ENST00000396521 SORL1Q92673 2214 aa13.64□□□□□ -0.23
EXOSC3-202ENST00000396521 A0A1W2PPE3 182 aa13.64□□□□□ -0.23
EXOSC3-202ENST00000396521 C15orf65H3BRN8 121 aa13.64□□□□□ -0.23
EXOSC3-202ENST00000396521 GABRPO00591 440 aa13.64□□□□□ -0.23
EXOSC3-202ENST00000396521 ZNF780AO75290 641 aaPredicted RBP13.64□□□□□ -0.23
EXOSC3-202ENST00000396521 OR7C1O76099 320 aaPredicted RBP13.64□□□□□ -0.23
EXOSC3-202ENST00000396521 CSTBP04080 98 aaKnown RBP13.64□□□□□ -0.23
EXOSC3-202ENST00000396521 CD2P06729 351 aa13.64□□□□□ -0.23
EXOSC3-202ENST00000396521 MPV17LQ2QL34 196 aa13.64□□□□□ -0.23
EXOSC3-202ENST00000396521 PIGYQ3MUY2 71 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms