RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 C1orf174Q8IYL3 243 aa10.28□□□□□ -0.76
ITGB1-202ENST00000396033 ZNF565Q8N9K5 539 aa10.28□□□□□ -0.76
ITGB1-202ENST00000396033 MRPL24Q96A35 216 aaKnown RBP10.28□□□□□ -0.76
ITGB1-202ENST00000396033 MUCL1Q96DR8 90 aa10.28□□□□□ -0.76
ITGB1-202ENST00000396033 SUCNR1Q9BXA5 334 aa10.28□□□□□ -0.76
ITGB1-202ENST00000396033 MAP1BP46821 2468 aaKnown RBP10.28□□□□□ -0.76
ITGB1-202ENST00000396033 RP1L1Q8IWN7 2480 aaPredicted RBP10.28□□□□□ -0.76
ITGB1-202ENST00000396033 IGKV1-6A0A0C4DH72 117 aa10.28□□□□□ -0.76
ITGB1-202ENST00000396033 H0YIZ8 118 aa10.28□□□□□ -0.76
ITGB1-202ENST00000396033 K7ENP7 123 aa10.28□□□□□ -0.76
ITGB1-202ENST00000396033 PRRG2O14669 202 aa10.28□□□□□ -0.76
ITGB1-202ENST00000396033 PET100P0DJ07 73 aa10.28□□□□□ -0.76
ITGB1-202ENST00000396033 RCC1P18754 421 aaPredicted RBP10.28□□□□□ -0.76
ITGB1-202ENST00000396033 BMP5P22003 454 aa10.28□□□□□ -0.76
ITGB1-202ENST00000396033 TDGF1P3P51864 188 aa10.28□□□□□ -0.76
ITGB1-202ENST00000396033 RAB32Q13637 225 aa10.28□□□□□ -0.76
ITGB1-202ENST00000396033 PRAMEF6Q5VXH4 476 aa10.28□□□□□ -0.76
ITGB1-202ENST00000396033 GGNBP1Q5YKI7 109 aa10.28□□□□□ -0.76
ITGB1-202ENST00000396033 ZNF826PQ6ZT77 177 aa10.28□□□□□ -0.76
ITGB1-202ENST00000396033 LDLRAD3Q86YD5 345 aa10.28□□□□□ -0.76
ITGB1-202ENST00000396033 EDARADDQ8WWZ3 215 aa10.28□□□□□ -0.76
ITGB1-202ENST00000396033 RNF126Q9BV68 326 aa10.28□□□□□ -0.76
ITGB1-202ENST00000396033 OR14J1Q9UGF5 321 aa10.28□□□□□ -0.76
ITGB1-202ENST00000396033 BSNQ9UPA5 3926 aa10.28□□□□□ -0.76
ITGB1-202ENST00000396033 DMXL2Q8TDJ6 3036 aa10.28□□□□□ -0.76
ITGB1-202ENST00000396033 SH2D1BO14796 132 aa10.28□□□□□ -0.76
ITGB1-202ENST00000396033 PHF1O43189 567 aaPredicted RBP10.28□□□□□ -0.76
ITGB1-202ENST00000396033 ACAA1P09110 424 aaPredicted RBP10.28□□□□□ -0.76
ITGB1-202ENST00000396033 ZNF146Q15072 292 aa10.28□□□□□ -0.76
ITGB1-202ENST00000396033 GUCA2BQ16661 112 aa10.28□□□□□ -0.76
ITGB1-202ENST00000396033 SPIN3Q5JUX0 258 aa10.28□□□□□ -0.76
ITGB1-202ENST00000396033 PRSS54Q6PEW0 395 aa10.28□□□□□ -0.76
ITGB1-202ENST00000396033 Q8NA96 180 aa10.28□□□□□ -0.76
ITGB1-202ENST00000396033 ZNF471Q9BX82 626 aaPredicted RBP10.28□□□□□ -0.76
ITGB1-202ENST00000396033 TRBV6-7A0A0A0MS04 114 aa10.27□□□□□ -0.76
ITGB1-202ENST00000396033 ATG12O94817 140 aa10.27□□□□□ -0.76
ITGB1-202ENST00000396033 LUMP51884 338 aaPredicted RBP10.27□□□□□ -0.76
ITGB1-202ENST00000396033 ZNF880Q6PDB4 577 aa10.27□□□□□ -0.76
ITGB1-202ENST00000396033 UFSP2Q9NUQ7 469 aa10.27□□□□□ -0.76
ITGB1-202ENST00000396033 OR5AC2Q9NZP5 309 aa10.27□□□□□ -0.76
ITGB1-202ENST00000396033 HAND1O96004 215 aa10.27□□□□□ -0.77
ITGB1-202ENST00000396033 KCNJ3P48549 501 aa10.27□□□□□ -0.77
ITGB1-202ENST00000396033 FLI1Q01543 452 aaPredicted RBP10.27□□□□□ -0.77
ITGB1-202ENST00000396033 LIAT1Q6ZQX7 453 aa10.27□□□□□ -0.77
ITGB1-202ENST00000396033 FOXRED2Q8IWF2 684 aa10.27□□□□□ -0.77
ITGB1-202ENST00000396033 OR4A4PQ8NGN8 299 aa10.27□□□□□ -0.77
ITGB1-202ENST00000396033 PLPPR1Q8TBJ4 325 aa10.27□□□□□ -0.77
ITGB1-202ENST00000396033 SLC5A7Q9GZV3 580 aa10.27□□□□□ -0.77
ITGB1-202ENST00000396033 WNT9BO14905 357 aa10.27□□□□□ -0.77
ITGB1-202ENST00000396033 GNRHRP30968 328 aa10.27□□□□□ -0.77
ITGB1-202ENST00000396033 CEBPDP49716 269 aaPredicted RBP10.27□□□□□ -0.77
ITGB1-202ENST00000396033 RBMS3Q6XE24 437 aaKnown RBP10.27□□□□□ -0.77
ITGB1-202ENST00000396033 MOB1BQ7L9L4 216 aa10.27□□□□□ -0.77
ITGB1-202ENST00000396033 FAM185AQ8N0U4 392 aa10.27□□□□□ -0.77
ITGB1-202ENST00000396033 PUSL1Q8N0Z8 303 aaKnown RBP10.27□□□□□ -0.77
ITGB1-202ENST00000396033 TREM2Q9NZC2 230 aa10.27□□□□□ -0.77
ITGB1-202ENST00000396033 MSRB2Q9Y3D2 182 aa10.27□□□□□ -0.77
ITGB1-202ENST00000396033 ATMQ13315 3056 aa10.27□□□□□ -0.77
ITGB1-202ENST00000396033 H7C1Q1 480 aa10.26□□□□□ -0.77
ITGB1-202ENST00000396033 EIF3GO75821 320 aaKnown RBP eCLIP10.26□□□□□ -0.77
ITGB1-202ENST00000396033 TUSC2O75896 110 aa10.26□□□□□ -0.77
ITGB1-202ENST00000396033 CRYAAP02489 173 aa10.26□□□□□ -0.77
ITGB1-202ENST00000396033 GFRALQ6UXV0 394 aa10.26□□□□□ -0.77
ITGB1-202ENST00000396033 DOLPP1Q86YN1 238 aa10.26□□□□□ -0.77
ITGB1-202ENST00000396033 C11orf53Q8IXP5 236 aa10.26□□□□□ -0.77
ITGB1-202ENST00000396033 IL1F10Q8WWZ1 152 aa10.26□□□□□ -0.77
ITGB1-202ENST00000396033 KIRREL1Q96J84 757 aa10.26□□□□□ -0.77
ITGB1-202ENST00000396033 HES4Q9HCC6 221 aa10.26□□□□□ -0.77
ITGB1-202ENST00000396033 DUSP13Q9UII6 198 aa10.26□□□□□ -0.77
ITGB1-202ENST00000396033 TRAV39A0A0B4J263 110 aa10.26□□□□□ -0.77
ITGB1-202ENST00000396033 IGKV1D-13A0A0B4J2D9 117 aa10.26□□□□□ -0.77
ITGB1-202ENST00000396033 F5H0A9 414 aaPredicted RBP10.26□□□□□ -0.77
ITGB1-202ENST00000396033 MPPED1O15442 326 aa10.26□□□□□ -0.77
ITGB1-202ENST00000396033 IGKV1-13P0DP09 117 aa10.26□□□□□ -0.77
ITGB1-202ENST00000396033 IL15RAQ13261 267 aa10.26□□□□□ -0.77
ITGB1-202ENST00000396033 ZNF497Q6ZNH5 498 aa10.26□□□□□ -0.77
ITGB1-202ENST00000396033 ZNF818PQ6ZRF7 136 aa10.26□□□□□ -0.77
ITGB1-202ENST00000396033 LGI3Q8N145 548 aa10.26□□□□□ -0.77
ITGB1-202ENST00000396033 DMBX1Q8NFW5 382 aa10.26□□□□□ -0.77
ITGB1-202ENST00000396033 OR10J5Q8NHC4 309 aa10.26□□□□□ -0.77
ITGB1-202ENST00000396033 C2CD4CQ8TF44 421 aa10.26□□□□□ -0.77
ITGB1-202ENST00000396033 RRNAD1Q96FB5 475 aaKnown RBP10.26□□□□□ -0.77
ITGB1-202ENST00000396033 GLS2Q9UI32 602 aa10.26□□□□□ -0.77
ITGB1-202ENST00000396033 SH3BGRL2Q9UJC5 107 aa10.26□□□□□ -0.77
ITGB1-202ENST00000396033 TRAPPC2LQ9UL33 140 aa10.26□□□□□ -0.77
ITGB1-202ENST00000396033 PCDHB10Q9UN67 800 aa10.26□□□□□ -0.77
ITGB1-202ENST00000396033 HEATR1Q9H583 2144 aaKnown RBP10.26□□□□□ -0.77
ITGB1-202ENST00000396033 C3orf85A0A1B0GTC6 90 aa10.26□□□□□ -0.77
ITGB1-202ENST00000396033 HSD17B6O14756 317 aa10.26□□□□□ -0.77
ITGB1-202ENST00000396033 AKR1C2P52895 323 aa10.26□□□□□ -0.77
ITGB1-202ENST00000396033 HOXA4Q00056 320 aaPredicted RBP10.26□□□□□ -0.77
ITGB1-202ENST00000396033 AKR1C1Q04828 323 aa10.26□□□□□ -0.77
ITGB1-202ENST00000396033 FAM27E3Q08E93 113 aa10.26□□□□□ -0.77
ITGB1-202ENST00000396033 WDR82Q6UXN9 313 aa10.26□□□□□ -0.77
ITGB1-202ENST00000396033 MEX3BQ6ZN04 569 aaKnown RBP10.26□□□□□ -0.77
ITGB1-202ENST00000396033 LYZL2Q7Z4W2 148 aa10.26□□□□□ -0.77
ITGB1-202ENST00000396033 GAPTQ8N292 157 aa10.26□□□□□ -0.77
ITGB1-202ENST00000396033 PRR18Q8N4B5 295 aa10.26□□□□□ -0.77
ITGB1-202ENST00000396033 GLYATL2Q8WU03 294 aa10.26□□□□□ -0.77
ITGB1-202ENST00000396033 MSI2Q96DH6 328 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms