RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 UBALD1Q8TB05 177 aa12.82□□□□□ -0.36
CXCL12-206ENST00000395795 MYDGFQ969H8 173 aa12.82□□□□□ -0.36
CXCL12-206ENST00000395795 TOMM40LQ969M1 308 aa12.82□□□□□ -0.36
CXCL12-206ENST00000395795 ST6GALNAC6Q969X2 333 aa12.82□□□□□ -0.36
CXCL12-206ENST00000395795 RPEQ96AT9 228 aa12.82□□□□□ -0.36
CXCL12-206ENST00000395795 RBMXL1Q96E39 390 aaKnown RBP12.82□□□□□ -0.36
CXCL12-206ENST00000395795 DERL3Q96Q80 235 aa12.82□□□□□ -0.36
CXCL12-206ENST00000395795 C8orf4Q9NR00 106 aa12.82□□□□□ -0.36
CXCL12-206ENST00000395795 PLCXD1Q9NUJ7 323 aa12.82□□□□□ -0.36
CXCL12-206ENST00000395795 CNOT2Q9NZN8 540 aaKnown RBP12.82□□□□□ -0.36
CXCL12-206ENST00000395795 A0A1W2PRX2 142 aa12.81□□□□□ -0.36
CXCL12-206ENST00000395795 CD1AP06126 327 aa12.81□□□□□ -0.36
CXCL12-206ENST00000395795 CAPGP40121 348 aa12.81□□□□□ -0.36
CXCL12-206ENST00000395795 GNG10P50151 68 aa12.81□□□□□ -0.36
CXCL12-206ENST00000395795 MPV17LQ2QL34 196 aa12.81□□□□□ -0.36
CXCL12-206ENST00000395795 SLC22A6Q4U2R8 563 aa12.81□□□□□ -0.36
CXCL12-206ENST00000395795 LINC00596Q86U02 117 aa12.81□□□□□ -0.36
CXCL12-206ENST00000395795 LINC00311Q8N616 119 aa12.81□□□□□ -0.36
CXCL12-206ENST00000395795 Q8N6K4 173 aa12.81□□□□□ -0.36
CXCL12-206ENST00000395795 C5orf56Q8N8D9 126 aa12.81□□□□□ -0.36
CXCL12-206ENST00000395795 ZNF439Q8NDP4 499 aa12.81□□□□□ -0.36
CXCL12-206ENST00000395795 SETD9Q8NE22 299 aa12.81□□□□□ -0.36
CXCL12-206ENST00000395795 OR4F17Q8NGA8 305 aa12.81□□□□□ -0.36
CXCL12-206ENST00000395795 CAPSLQ8WWF8 208 aa12.81□□□□□ -0.36
CXCL12-206ENST00000395795 MUL1Q969V5 352 aa12.81□□□□□ -0.36
CXCL12-206ENST00000395795 PHF21AQ96BD5 680 aa12.81□□□□□ -0.36
CXCL12-206ENST00000395795 AKR1E2Q96JD6 320 aa12.81□□□□□ -0.36
CXCL12-206ENST00000395795 OR4F4Q96R69 305 aa12.81□□□□□ -0.36
CXCL12-206ENST00000395795 MOB4Q9Y3A3 225 aa12.81□□□□□ -0.36
CXCL12-206ENST00000395795 RRP15Q9Y3B9 282 aaKnown RBP12.81□□□□□ -0.36
CXCL12-206ENST00000395795 TMEM30CPA0ZSE6 113 aa12.8□□□□□ -0.36
CXCL12-206ENST00000395795 EFCAB10A6NFE3 127 aa12.8□□□□□ -0.36
CXCL12-206ENST00000395795 SLC31A2O15432 143 aa12.8□□□□□ -0.36
CXCL12-206ENST00000395795 GZMHP20718 246 aa12.8□□□□□ -0.36
CXCL12-206ENST00000395795 MNDAP41218 407 aa12.8□□□□□ -0.36
CXCL12-206ENST00000395795 ZNF816Q0VGE8 651 aaPredicted RBP12.8□□□□□ -0.36
CXCL12-206ENST00000395795 MADCAM1Q13477 382 aa12.8□□□□□ -0.36
CXCL12-206ENST00000395795 INSL4Q14641 139 aa12.8□□□□□ -0.36
CXCL12-206ENST00000395795 ETV3LQ6ZN32 361 aa12.8□□□□□ -0.36
CXCL12-206ENST00000395795 CENPVQ7Z7K6 275 aaPredicted RBP12.8□□□□□ -0.36
CXCL12-206ENST00000395795 OR8H3Q8N146 312 aa12.8□□□□□ -0.36
CXCL12-206ENST00000395795 NANOGP1Q8N7R0 232 aa12.8□□□□□ -0.36
CXCL12-206ENST00000395795 C8orf31Q8N9H6 132 aa12.8□□□□□ -0.36
CXCL12-206ENST00000395795 TMEM104Q8NE00 496 aa12.8□□□□□ -0.36
CXCL12-206ENST00000395795 OR52M1Q8NGK5 317 aa12.8□□□□□ -0.36
CXCL12-206ENST00000395795 CCDC107Q8WV48 283 aa12.8□□□□□ -0.36
CXCL12-206ENST00000395795 PCDHB16Q9NRJ7 776 aa12.8□□□□□ -0.36
CXCL12-206ENST00000395795 GFOD1Q9NXC2 390 aa12.8□□□□□ -0.36
CXCL12-206ENST00000395795 AMMECR1Q9Y4X0 333 aaPredicted RBP12.8□□□□□ -0.36
CXCL12-206ENST00000395795 PNMA8CA0A1B0GUJ8 204 aa12.79□□□□□ -0.36
CXCL12-206ENST00000395795 LINC01548A6NM66 108 aa12.79□□□□□ -0.36
CXCL12-206ENST00000395795 C12orf77C9JDV5 145 aa12.79□□□□□ -0.36
CXCL12-206ENST00000395795 M0QZK8 103 aa12.79□□□□□ -0.36
CXCL12-206ENST00000395795 ORC5O43913 435 aa12.79□□□□□ -0.36
CXCL12-206ENST00000395795 ZNF780AO75290 641 aaPredicted RBP12.79□□□□□ -0.36
CXCL12-206ENST00000395795 SC5DO75845 299 aa12.79□□□□□ -0.36
CXCL12-206ENST00000395795 CSTBP04080 98 aaKnown RBP12.79□□□□□ -0.36
CXCL12-206ENST00000395795 FAM106CPP0CH98 169 aa12.79□□□□□ -0.36
CXCL12-206ENST00000395795 GTF2F2P13984 249 aa12.79□□□□□ -0.36
CXCL12-206ENST00000395795 VHLP40337 213 aa12.79□□□□□ -0.36
CXCL12-206ENST00000395795 RAB7AP51149 207 aa12.79□□□□□ -0.36
CXCL12-206ENST00000395795 ARHGDIBP52566 201 aa12.79□□□□□ -0.36
CXCL12-206ENST00000395795 ZNF134P52741 427 aa12.79□□□□□ -0.36
CXCL12-206ENST00000395795 ARSJQ5FYB0 599 aaPredicted RBP12.79□□□□□ -0.36
CXCL12-206ENST00000395795 GLIPR1L1Q6UWM5 242 aa12.79□□□□□ -0.36
CXCL12-206ENST00000395795 UNQ9370/PRO34162Q6UXP9 181 aa12.79□□□□□ -0.36
CXCL12-206ENST00000395795 AHSA2Q719I0 299 aa12.79□□□□□ -0.36
CXCL12-206ENST00000395795 C5orf24Q7Z6I8 188 aa12.79□□□□□ -0.36
CXCL12-206ENST00000395795 CDH26Q8IXH8 852 aa12.79□□□□□ -0.36
CXCL12-206ENST00000395795 SGCDQ92629 289 aa12.79□□□□□ -0.36
CXCL12-206ENST00000395795 TFAP2CQ92754 450 aa12.79□□□□□ -0.36
CXCL12-206ENST00000395795 PLSCR3Q9NRY6 295 aa12.79□□□□□ -0.36
CXCL12-206ENST00000395795 PAK1IP1Q9NWT1 392 aaPredicted RBP12.79□□□□□ -0.36
CXCL12-206ENST00000395795 MRPS28Q9Y2Q9 187 aaKnown RBP12.79□□□□□ -0.36
CXCL12-206ENST00000395795 TSSC4Q9Y5U2 329 aaPredicted RBP12.79□□□□□ -0.36
CXCL12-206ENST00000395795 IGHV3-43A0A0B4J1X8 118 aa12.78□□□□□ -0.36
CXCL12-206ENST00000395795 IGHV1-3A0A0C4DH29 117 aa12.78□□□□□ -0.36
CXCL12-206ENST00000395795 TCRBV4S1A1TA0A5B7 111 aa12.78□□□□□ -0.36
CXCL12-206ENST00000395795 HSD17B6O14756 317 aa12.78□□□□□ -0.36
CXCL12-206ENST00000395795 PEX14O75381 377 aa12.78□□□□□ -0.36
CXCL12-206ENST00000395795 IGKV1D-33P01593 117 aa12.78□□□□□ -0.36
CXCL12-206ENST00000395795 IGKV1-33P01594 117 aa12.78□□□□□ -0.36
CXCL12-206ENST00000395795 IGHV3-43DP0DP04 118 aa12.78□□□□□ -0.36
CXCL12-206ENST00000395795 CD37P11049 281 aa12.78□□□□□ -0.36
CXCL12-206ENST00000395795 IGLL1P15814 213 aa12.78□□□□□ -0.36
CXCL12-206ENST00000395795 CELP19835 753 aa12.78□□□□□ -0.36
CXCL12-206ENST00000395795 REG1BP48304 166 aa12.78□□□□□ -0.36
CXCL12-206ENST00000395795 WNT4P56705 351 aa12.78□□□□□ -0.36
CXCL12-206ENST00000395795 ATAD3CQ5T2N8 411 aa12.78□□□□□ -0.36
CXCL12-206ENST00000395795 FOXB2Q5VYV0 432 aa12.78□□□□□ -0.36
CXCL12-206ENST00000395795 C18orf65Q6ZTR6 163 aa12.78□□□□□ -0.36
CXCL12-206ENST00000395795 C8orf59Q8N0T1 100 aaPredicted RBP12.78□□□□□ -0.36
CXCL12-206ENST00000395795 ARL11Q969Q4 196 aa12.78□□□□□ -0.36
CXCL12-206ENST00000395795 Q96M66 194 aa12.78□□□□□ -0.36
CXCL12-206ENST00000395795 NOL4LQ96MY1 436 aaPredicted RBP12.78□□□□□ -0.36
CXCL12-206ENST00000395795 BANF2Q9H503 90 aa12.78□□□□□ -0.36
CXCL12-206ENST00000395795 AURKAIP1Q9NWT8 199 aaPredicted RBP12.78□□□□□ -0.36
CXCL12-206ENST00000395795 LSM2Q9Y333 95 aaKnown RBP12.78□□□□□ -0.36
CXCL12-206ENST00000395795 IGHV3-72A0A0B4J1Y9 119 aa12.77□□□□□ -0.37
CXCL12-206ENST00000395795 ZNF736B4DX44 427 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms