RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 IGKV1D-13A0A0B4J2D9 117 aa13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 OR5H1A6NKK0 313 aa13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 CDRT15L2A8MXV6 281 aa13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 ABCD4O14678 606 aa13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 HMGB3O15347 200 aaKnown RBP13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 IGKV1-13P0DP09 117 aa13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 PIP4P1Q86T03 277 aa13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 CCDC36Q8IYA8 594 aa13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 OR1L1Q8NH94 360 aa13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 OR5P3Q8WZ94 311 aa13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 MRGPRFQ96AM1 343 aa13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 LINC00052Q96N35 136 aa13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 ALX4Q9H161 411 aaPredicted RBP13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 OR2D2Q9H210 308 aa13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 SLC25A32Q9H2D1 315 aa13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 FBXL17Q9UF56 701 aa13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 PURGQ9UJV8 347 aaKnown RBP13.55□□□□□ -0.24
SMARCD1-202ENST00000394963 MPPED1O15442 326 aa13.54□□□□□ -0.24
SMARCD1-202ENST00000394963 BCL2L11O43521 198 aa13.54□□□□□ -0.24
SMARCD1-202ENST00000394963 TSPAN15O95858 294 aa13.54□□□□□ -0.24
SMARCD1-202ENST00000394963 LINC00205P59089 165 aa13.54□□□□□ -0.24
SMARCD1-202ENST00000394963 CXorf66Q5JRM2 361 aaPredicted RBP13.54□□□□□ -0.24
SMARCD1-202ENST00000394963 ZNF818PQ6ZRF7 136 aa13.54□□□□□ -0.24
SMARCD1-202ENST00000394963 DMBX1Q8NFW5 382 aa13.54□□□□□ -0.24
SMARCD1-202ENST00000394963 PCDHB10Q9UN67 800 aa13.54□□□□□ -0.24
SMARCD1-202ENST00000394963 FBXO7Q9Y3I1 522 aa13.54□□□□□ -0.24
SMARCD1-202ENST00000394963 F12P00748 615 aaPredicted RBP13.54□□□□□ -0.24
SMARCD1-202ENST00000394963 PSG2P11465 335 aa13.54□□□□□ -0.24
SMARCD1-202ENST00000394963 PMELP40967 661 aa13.54□□□□□ -0.24
SMARCD1-202ENST00000394963 GLIPR1P48060 266 aa13.54□□□□□ -0.24
SMARCD1-202ENST00000394963 CASP6P55212 293 aa13.54□□□□□ -0.24
SMARCD1-202ENST00000394963 TMEM267Q0VDI3 215 aaPredicted RBP13.54□□□□□ -0.24
SMARCD1-202ENST00000394963 MRPS24Q96EL2 167 aaKnown RBP13.54□□□□□ -0.24
SMARCD1-202ENST00000394963 OR2V2Q96R30 315 aa13.54□□□□□ -0.24
SMARCD1-202ENST00000394963 PRRX2Q99811 253 aa13.54□□□□□ -0.24
SMARCD1-202ENST00000394963 GPR31O00270 319 aa13.54□□□□□ -0.24
SMARCD1-202ENST00000394963 SSTR5P35346 364 aa13.54□□□□□ -0.24
SMARCD1-202ENST00000394963 SUPT4H1P63272 117 aaKnown RBP13.54□□□□□ -0.24
SMARCD1-202ENST00000394963 GPR157Q5UAW9 335 aa13.54□□□□□ -0.24
SMARCD1-202ENST00000394963 STOML3Q8TAV4 291 aa13.54□□□□□ -0.24
SMARCD1-202ENST00000394963 SDSLQ96GA7 329 aa13.54□□□□□ -0.24
SMARCD1-202ENST00000394963 MRPS18CQ9Y3D5 142 aaKnown RBP13.54□□□□□ -0.24
SMARCD1-202ENST00000394963 NOTCH3Q9UM47 2321 aa13.54□□□□□ -0.24
SMARCD1-202ENST00000394963 ST8SIA5O15466 376 aa13.53□□□□□ -0.24
SMARCD1-202ENST00000394963 CTSDP07339 412 aaPredicted RBP13.53□□□□□ -0.24
SMARCD1-202ENST00000394963 CD80P33681 288 aa13.53□□□□□ -0.24
SMARCD1-202ENST00000394963 HIST1H3AP68431 136 aa13.53□□□□□ -0.24
SMARCD1-202ENST00000394963 HIST2H3PS2Q5TEC6 136 aa13.53□□□□□ -0.24
SMARCD1-202ENST00000394963 INO80CQ6PI98 192 aaPredicted RBP13.53□□□□□ -0.24
SMARCD1-202ENST00000394963 C20orf204Q6ZNR8 217 aa13.53□□□□□ -0.24
SMARCD1-202ENST00000394963 HIST2H3AQ71DI3 136 aa13.53□□□□□ -0.24
SMARCD1-202ENST00000394963 GALMQ96C23 342 aa13.53□□□□□ -0.24
SMARCD1-202ENST00000394963 ZDHHC11Q9H8X9 412 aa13.53□□□□□ -0.24
SMARCD1-202ENST00000394963 RAB18Q9NP72 206 aa13.53□□□□□ -0.24
SMARCD1-202ENST00000394963 H0YIZ8 118 aa13.53□□□□□ -0.24
SMARCD1-202ENST00000394963 SELLP14151 372 aa13.53□□□□□ -0.24
SMARCD1-202ENST00000394963 P2RX3P56373 397 aa13.53□□□□□ -0.24
SMARCD1-202ENST00000394963 KLF3P57682 345 aaPredicted RBP13.53□□□□□ -0.24
SMARCD1-202ENST00000394963 Q3ZCU0 254 aa13.53□□□□□ -0.24
SMARCD1-202ENST00000394963 FAM89BQ8N5H3 189 aa13.53□□□□□ -0.24
SMARCD1-202ENST00000394963 OR5T1Q8NG75 326 aa13.53□□□□□ -0.24
SMARCD1-202ENST00000394963 DECR2Q9NUI1 292 aa13.53□□□□□ -0.24
SMARCD1-202ENST00000394963 OSGIN2Q9Y236 505 aa13.53□□□□□ -0.24
SMARCD1-202ENST00000394963 CEBPZOSA8MTT3 80 aa13.53□□□□□ -0.24
SMARCD1-202ENST00000394963 TRDCB7Z8K6 153 aa13.53□□□□□ -0.24
SMARCD1-202ENST00000394963 AKR1D1P51857 326 aa13.53□□□□□ -0.24
SMARCD1-202ENST00000394963 TNFSF18Q9UNG2 199 aa13.53□□□□□ -0.24
SMARCD1-202ENST00000394963 RAXQ9Y2V3 346 aa13.53□□□□□ -0.24
SMARCD1-202ENST00000394963 EIF5AP63241 154 aaKnown RBP13.52□□□□□ -0.24
SMARCD1-202ENST00000394963 PXDC1Q5TGL8 231 aa13.52□□□□□ -0.24
SMARCD1-202ENST00000394963 ITLN1Q8WWA0 313 aa13.52□□□□□ -0.24
SMARCD1-202ENST00000394963 TMPRSS2O15393 492 aa13.52□□□□□ -0.25
SMARCD1-202ENST00000394963 NMBP08949 121 aa13.52□□□□□ -0.25
SMARCD1-202ENST00000394963 ELLP55199 621 aaPredicted RBP13.52□□□□□ -0.25
SMARCD1-202ENST00000394963 COL10A1Q03692 680 aa13.52□□□□□ -0.25
SMARCD1-202ENST00000394963 ZNF529Q6P280 563 aa13.52□□□□□ -0.25
SMARCD1-202ENST00000394963 HEXA-AS1Q9H8Q6 139 aa13.52□□□□□ -0.25
SMARCD1-202ENST00000394963 CACNG5Q9UF02 275 aa13.52□□□□□ -0.25
SMARCD1-202ENST00000394963 PQLC2LA1A4F0 135 aa13.52□□□□□ -0.25
SMARCD1-202ENST00000394963 HMSDA8MTL9 139 aa13.52□□□□□ -0.25
SMARCD1-202ENST00000394963 Q6ZRG5 221 aa13.52□□□□□ -0.25
SMARCD1-202ENST00000394963 SLC38A6Q8IZM9 456 aa13.52□□□□□ -0.25
SMARCD1-202ENST00000394963 TM2D1Q9BX74 207 aa13.52□□□□□ -0.25
SMARCD1-202ENST00000394963 AHRRA9YTQ3 701 aa13.51□□□□□ -0.25
SMARCD1-202ENST00000394963 MSTNO14793 375 aa13.51□□□□□ -0.25
SMARCD1-202ENST00000394963 GLAP06280 429 aa13.51□□□□□ -0.25
SMARCD1-202ENST00000394963 CLLU1Q5K131 121 aa13.51□□□□□ -0.25
SMARCD1-202ENST00000394963 SCGB1C1Q8TD33 95 aa13.51□□□□□ -0.25
SMARCD1-202ENST00000394963 TECTBQ96PL2 329 aa13.51□□□□□ -0.25
SMARCD1-202ENST00000394963 SPIN2AQ99865 258 aa13.51□□□□□ -0.25
SMARCD1-202ENST00000394963 SPIN2BQ9BPZ2 258 aa13.51□□□□□ -0.25
SMARCD1-202ENST00000394963 WASF3Q9UPY6 502 aa13.51□□□□□ -0.25
SMARCD1-202ENST00000394963 CYB5R3P00387 301 aaPredicted RBP13.51□□□□□ -0.25
SMARCD1-202ENST00000394963 METTL15P1P0C7V9 234 aa13.51□□□□□ -0.25
SMARCD1-202ENST00000394963 FHITP49789 147 aa13.51□□□□□ -0.25
SMARCD1-202ENST00000394963 G3V3Q6 166 aa13.51□□□□□ -0.25
SMARCD1-202ENST00000394963 TNFAIP6P98066 277 aaPredicted RBP13.51□□□□□ -0.25
SMARCD1-202ENST00000394963 SMIM21Q3B7S5 101 aa13.51□□□□□ -0.25
SMARCD1-202ENST00000394963 TMEM211Q6ICI0 200 aa13.51□□□□□ -0.25
SMARCD1-202ENST00000394963 LIAT1Q6ZQX7 453 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms