RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 KHDC3LQ587J8 217 aa10.77□□□□□ -0.68
SIN3A-202ENST00000394947 LYZL2Q7Z4W2 148 aa10.77□□□□□ -0.68
SIN3A-202ENST00000394947 ZDHHC22Q8N966 263 aa10.77□□□□□ -0.68
SIN3A-202ENST00000394947 GPA33Q99795 319 aa10.77□□□□□ -0.68
SIN3A-202ENST00000394947 TMEM167BQ9NRX6 74 aa10.77□□□□□ -0.68
SIN3A-202ENST00000394947 SERGEFQ9UGK8 458 aa10.77□□□□□ -0.68
SIN3A-202ENST00000394947 TRDCB7Z8K6 153 aa10.77□□□□□ -0.68
SIN3A-202ENST00000394947 SRFP11831 508 aa10.77□□□□□ -0.68
SIN3A-202ENST00000394947 HTN3P15516 51 aa10.77□□□□□ -0.68
SIN3A-202ENST00000394947 TM4SF4P48230 202 aa10.77□□□□□ -0.68
SIN3A-202ENST00000394947 DLX6P56179 175 aa10.77□□□□□ -0.68
SIN3A-202ENST00000394947 COL10A1Q03692 680 aa10.77□□□□□ -0.68
SIN3A-202ENST00000394947 MRPL24Q96A35 216 aaKnown RBP10.77□□□□□ -0.68
SIN3A-202ENST00000394947 RCC2Q9P258 522 aaKnown RBP10.77□□□□□ -0.68
SIN3A-202ENST00000394947 TMEM189A5PLL7 270 aa10.77□□□□□ -0.69
SIN3A-202ENST00000394947 PRB4P10163 310 aaPredicted RBP10.77□□□□□ -0.69
SIN3A-202ENST00000394947 ADAMTS17Q8TE56 1095 aa10.77□□□□□ -0.69
SIN3A-202ENST00000394947 PERPQ96FX8 193 aa10.77□□□□□ -0.69
SIN3A-202ENST00000394947 RPP25Q9BUL9 199 aaKnown RBP10.77□□□□□ -0.69
SIN3A-202ENST00000394947 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.77□□□□□ -0.69
SIN3A-202ENST00000394947 HSPB1P04792 205 aaKnown RBP10.77□□□□□ -0.69
SIN3A-202ENST00000394947 LGALS3P17931 250 aaKnown RBP10.77□□□□□ -0.69
SIN3A-202ENST00000394947 RAE1P78406 368 aaKnown RBP10.77□□□□□ -0.69
SIN3A-202ENST00000394947 CTF1Q16619 201 aa10.77□□□□□ -0.69
SIN3A-202ENST00000394947 STXBP6Q8NFX7 210 aa10.77□□□□□ -0.69
SIN3A-202ENST00000394947 ANAPC16Q96DE5 110 aa10.77□□□□□ -0.69
SIN3A-202ENST00000394947 FGF20Q9NP95 211 aaPredicted RBP10.77□□□□□ -0.69
SIN3A-202ENST00000394947 STARD10Q9Y365 291 aa10.77□□□□□ -0.69
SIN3A-202ENST00000394947 TRAV17A0A0B4J275 112 aa10.77□□□□□ -0.69
SIN3A-202ENST00000394947 MUC21A0A0G2JKD1 596 aa10.77□□□□□ -0.69
SIN3A-202ENST00000394947 MUC21A0A140T8X8 626 aa10.77□□□□□ -0.69
SIN3A-202ENST00000394947 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.77□□□□□ -0.69
SIN3A-202ENST00000394947 MUC21Q5SSG8 566 aa10.77□□□□□ -0.69
SIN3A-202ENST00000394947 CT55Q8WUE5 264 aa10.77□□□□□ -0.69
SIN3A-202ENST00000394947 LTBP3Q9NS15 1303 aa10.77□□□□□ -0.69
SIN3A-202ENST00000394947 SNAI2O43623 268 aa10.77□□□□□ -0.69
SIN3A-202ENST00000394947 MDH2P40926 338 aaKnown RBP10.77□□□□□ -0.69
SIN3A-202ENST00000394947 SLC25A53Q5H9E4 307 aa10.77□□□□□ -0.69
SIN3A-202ENST00000394947 EBLN2Q6P2I7 272 aa10.77□□□□□ -0.69
SIN3A-202ENST00000394947 SPSB1Q96BD6 273 aa10.77□□□□□ -0.69
SIN3A-202ENST00000394947 ALG14Q96F25 216 aa10.77□□□□□ -0.69
SIN3A-202ENST00000394947 GPHA2Q96T91 129 aa10.77□□□□□ -0.69
SIN3A-202ENST00000394947 WNT5BQ9H1J7 359 aa10.77□□□□□ -0.69
SIN3A-202ENST00000394947 H3BQ15 152 aa10.76□□□□□ -0.69
SIN3A-202ENST00000394947 SS18L1O75177 396 aaPredicted RBP10.76□□□□□ -0.69
SIN3A-202ENST00000394947 KBTBD11O94819 623 aa10.76□□□□□ -0.69
SIN3A-202ENST00000394947 SOD3P08294 240 aa10.76□□□□□ -0.69
SIN3A-202ENST00000394947 FCGR2BP31994 310 aaPredicted RBP10.76□□□□□ -0.69
SIN3A-202ENST00000394947 FAM3BP58499 235 aaPredicted RBP10.76□□□□□ -0.69
SIN3A-202ENST00000394947 HSPB9Q9BQS6 159 aa10.76□□□□□ -0.69
SIN3A-202ENST00000394947 GPR35Q9HC97 309 aa10.76□□□□□ -0.69
SIN3A-202ENST00000394947 HIGD1AQ9Y241 93 aa10.76□□□□□ -0.69
SIN3A-202ENST00000394947 MPDU1O75352 247 aa10.76□□□□□ -0.69
SIN3A-202ENST00000394947 OR2A4O95047 310 aa10.76□□□□□ -0.69
SIN3A-202ENST00000394947 CT62P0C5K7 136 aa10.76□□□□□ -0.69
SIN3A-202ENST00000394947 GABRG2P18507 467 aa10.76□□□□□ -0.69
SIN3A-202ENST00000394947 C2orf83Q53S99 150 aa10.76□□□□□ -0.69
SIN3A-202ENST00000394947 WDR25Q64LD2 544 aaPredicted RBP10.76□□□□□ -0.69
SIN3A-202ENST00000394947 RPS4Y2Q8TD47 263 aa10.76□□□□□ -0.69
SIN3A-202ENST00000394947 OR2A7Q96R45 310 aa10.76□□□□□ -0.69
SIN3A-202ENST00000394947 TMEFF2Q9UIK5 374 aaPredicted RBP10.76□□□□□ -0.69
SIN3A-202ENST00000394947 IGLV3-10A0A075B6K4 115 aa10.76□□□□□ -0.69
SIN3A-202ENST00000394947 PLPP3O14495 311 aa10.76□□□□□ -0.69
SIN3A-202ENST00000394947 SMAD4Q13485 552 aaKnown RBP10.76□□□□□ -0.69
SIN3A-202ENST00000394947 CCDC88CQ9P219 2028 aa10.76□□□□□ -0.69
SIN3A-202ENST00000394947 CXorf65A6NEN9 183 aa10.76□□□□□ -0.69
SIN3A-202ENST00000394947 ISLRO14498 428 aa10.76□□□□□ -0.69
SIN3A-202ENST00000394947 CRYBB2P43320 205 aa10.76□□□□□ -0.69
SIN3A-202ENST00000394947 RELQ04864 619 aaPredicted RBP10.76□□□□□ -0.69
SIN3A-202ENST00000394947 IL13RA2Q14627 380 aa10.76□□□□□ -0.69
SIN3A-202ENST00000394947 SPAG17Q6Q759 2223 aa10.76□□□□□ -0.69
SIN3A-202ENST00000394947 PDCD6O75340 191 aa10.76□□□□□ -0.69
SIN3A-202ENST00000394947 CTLA4P16410 223 aa10.76□□□□□ -0.69
SIN3A-202ENST00000394947 CKS2P33552 79 aa10.76□□□□□ -0.69
SIN3A-202ENST00000394947 TRIP6Q15654 476 aaKnown RBP10.76□□□□□ -0.69
SIN3A-202ENST00000394947 PAXXQ9BUH6 204 aa10.76□□□□□ -0.69
SIN3A-202ENST00000394947 GHITMQ9H3K2 345 aa10.76□□□□□ -0.69
SIN3A-202ENST00000394947 ADAMTS5Q9UNA0 930 aa10.76□□□□□ -0.69
SIN3A-202ENST00000394947 IL11RAQ14626 422 aa10.75□□□□□ -0.69
SIN3A-202ENST00000394947 ARRDC1Q8N5I2 433 aa10.75□□□□□ -0.69
SIN3A-202ENST00000394947 CDK5RAP2Q96SN8 1893 aa10.75□□□□□ -0.69
SIN3A-202ENST00000394947 IGHV3OR16-13A0A075B7E8 117 aa10.75□□□□□ -0.69
SIN3A-202ENST00000394947 IGHV3-74A0A0B4J1X5 117 aa10.75□□□□□ -0.69
SIN3A-202ENST00000394947 FCGR3AP08637 254 aa10.75□□□□□ -0.69
SIN3A-202ENST00000394947 ADRA2AP08913 450 aa10.75□□□□□ -0.69
SIN3A-202ENST00000394947 ZNF324BQ6AW86 544 aaPredicted RBP10.75□□□□□ -0.69
SIN3A-202ENST00000394947 PWWP2BQ6NUJ5 590 aa10.75□□□□□ -0.69
SIN3A-202ENST00000394947 OR10J6PQ8NGY7 276 aa10.75□□□□□ -0.69
SIN3A-202ENST00000394947 LEAP2Q969E1 77 aa10.75□□□□□ -0.69
SIN3A-202ENST00000394947 SFRP2Q96HF1 295 aa10.75□□□□□ -0.69
SIN3A-202ENST00000394947 DUX5Q96PT3 197 aa10.75□□□□□ -0.69
SIN3A-202ENST00000394947 S4R3C0 116 aa10.75□□□□□ -0.69
SIN3A-202ENST00000394947 CCL21O00585 134 aa10.75□□□□□ -0.69
SIN3A-202ENST00000394947 C1QL3Q5VWW1 255 aa10.75□□□□□ -0.69
SIN3A-202ENST00000394947 CBLN3Q6UW01 205 aa10.75□□□□□ -0.69
SIN3A-202ENST00000394947 SLC35E3Q7Z769 313 aa10.75□□□□□ -0.69
SIN3A-202ENST00000394947 PRSS27Q9BQR3 290 aa10.75□□□□□ -0.69
SIN3A-202ENST00000394947 SLC25A33Q9BSK2 321 aa10.75□□□□□ -0.69
SIN3A-202ENST00000394947 FLRT3Q9NZU0 649 aa10.75□□□□□ -0.69
SIN3A-202ENST00000394947 A0A1B0GU03 582 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms