RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 LUZP4Q9P127 313 aa11.5□□□□□ -0.57
GTF2F1-201ENST00000394456 FBXO9Q9UK97 447 aaPredicted RBP11.5□□□□□ -0.57
GTF2F1-201ENST00000394456 DIDO1Q9BTC0 2240 aaKnown RBP11.5□□□□□ -0.57
GTF2F1-201ENST00000394456 IGKV3D-15A0A087WSY6 115 aa11.5□□□□□ -0.57
GTF2F1-201ENST00000394456 KLRC4-KLRK1H3BQV0 150 aa11.5□□□□□ -0.57
GTF2F1-201ENST00000394456 WNT5AP41221 380 aa11.5□□□□□ -0.57
GTF2F1-201ENST00000394456 DYNLT3P51808 116 aa11.5□□□□□ -0.57
GTF2F1-201ENST00000394456 PMP22Q01453 160 aa11.5□□□□□ -0.57
GTF2F1-201ENST00000394456 HAGHQ16775 308 aa11.5□□□□□ -0.57
GTF2F1-201ENST00000394456 FAM53AQ6NSI3 398 aaPredicted RBP11.5□□□□□ -0.57
GTF2F1-201ENST00000394456 PRR18Q8N4B5 295 aa11.5□□□□□ -0.57
GTF2F1-201ENST00000394456 FAM24BQ8N5W8 94 aa11.5□□□□□ -0.57
GTF2F1-201ENST00000394456 OR5C1Q8NGR4 320 aa11.5□□□□□ -0.57
GTF2F1-201ENST00000394456 TMEM45BQ96B21 275 aa11.5□□□□□ -0.57
GTF2F1-201ENST00000394456 SMCO4Q9NRQ5 59 aa11.5□□□□□ -0.57
GTF2F1-201ENST00000394456 FAM86C1Q9NVL1 165 aa11.5□□□□□ -0.57
GTF2F1-201ENST00000394456 TNRC6AQ8NDV7 1962 aaKnown RBP11.49□□□□□ -0.57
GTF2F1-201ENST00000394456 CD46P15529 392 aa11.49□□□□□ -0.57
GTF2F1-201ENST00000394456 LMO1P25800 156 aa11.49□□□□□ -0.57
GTF2F1-201ENST00000394456 HOXA1P49639 335 aaPredicted RBP11.49□□□□□ -0.57
GTF2F1-201ENST00000394456 FGF12P61328 243 aa11.49□□□□□ -0.57
GTF2F1-201ENST00000394456 GNMTQ14749 295 aa11.49□□□□□ -0.57
GTF2F1-201ENST00000394456 GPR157Q5UAW9 335 aa11.49□□□□□ -0.57
GTF2F1-201ENST00000394456 ZDHHC23Q8IYP9 409 aa11.49□□□□□ -0.57
GTF2F1-201ENST00000394456 TMEM252Q8N6L7 170 aa11.49□□□□□ -0.57
GTF2F1-201ENST00000394456 ZNF565Q8N9K5 539 aa11.49□□□□□ -0.57
GTF2F1-201ENST00000394456 CCDC71LQ8N9Z2 235 aa11.49□□□□□ -0.57
GTF2F1-201ENST00000394456 OR2G3Q8NGZ4 309 aa11.49□□□□□ -0.57
GTF2F1-201ENST00000394456 BIN3Q9NQY0 253 aa11.49□□□□□ -0.57
GTF2F1-201ENST00000394456 OR1A1Q9P1Q5 309 aa11.49□□□□□ -0.57
GTF2F1-201ENST00000394456 TMED3Q9Y3Q3 217 aa11.49□□□□□ -0.57
GTF2F1-201ENST00000394456 CUL9Q8IWT3 2517 aa11.49□□□□□ -0.57
GTF2F1-201ENST00000394456 CEP250Q9BV73 2442 aa11.49□□□□□ -0.57
GTF2F1-201ENST00000394456 OR2T2Q6IF00 324 aa11.49□□□□□ -0.57
GTF2F1-201ENST00000394456 SUMF2Q8NBJ7 301 aa11.49□□□□□ -0.57
GTF2F1-201ENST00000394456 IL1F10Q8WWZ1 152 aa11.49□□□□□ -0.57
GTF2F1-201ENST00000394456 PUS1Q9Y606 427 aaKnown RBP eCLIP11.49□□□□□ -0.57
GTF2F1-201ENST00000394456 MUC6Q6W4X9 2439 aa11.49□□□□□ -0.57
GTF2F1-201ENST00000394456 AKAP13Q12802 2813 aa11.49□□□□□ -0.57
GTF2F1-201ENST00000394456 TRAV24A0A0B4J272 114 aa11.48□□□□□ -0.57
GTF2F1-201ENST00000394456 CHST1O43916 411 aa11.48□□□□□ -0.57
GTF2F1-201ENST00000394456 TK1P04183 234 aa11.48□□□□□ -0.57
GTF2F1-201ENST00000394456 ACAA1P09110 424 aaPredicted RBP11.48□□□□□ -0.57
GTF2F1-201ENST00000394456 UCP2P55851 309 aa11.48□□□□□ -0.57
GTF2F1-201ENST00000394456 SLC10A1Q14973 349 aa11.48□□□□□ -0.57
GTF2F1-201ENST00000394456 CEACAM21Q3KPI0 293 aa11.48□□□□□ -0.57
GTF2F1-201ENST00000394456 ZNF766Q5HY98 468 aa11.48□□□□□ -0.57
GTF2F1-201ENST00000394456 PCSK4Q6UW60 755 aa11.48□□□□□ -0.57
GTF2F1-201ENST00000394456 SLC16A13Q7RTY0 426 aa11.48□□□□□ -0.57
GTF2F1-201ENST00000394456 ZNF295-AS1Q8N0V1 137 aa11.48□□□□□ -0.57
GTF2F1-201ENST00000394456 TAAR3PQ9P1P4 343 aa11.48□□□□□ -0.57
GTF2F1-201ENST00000394456 KPTNQ9Y664 436 aa11.48□□□□□ -0.57
GTF2F1-201ENST00000394456 PTPRBP23467 1997 aa11.48□□□□□ -0.57
GTF2F1-201ENST00000394456 KIAA2026Q5HYC2 2103 aa11.48□□□□□ -0.57
GTF2F1-201ENST00000394456 CD300LBA8K4G0 201 aa11.48□□□□□ -0.57
GTF2F1-201ENST00000394456 ZNF727A8MUV8 499 aa11.48□□□□□ -0.57
GTF2F1-201ENST00000394456 CA6P23280 308 aa11.48□□□□□ -0.57
GTF2F1-201ENST00000394456 CCL11P51671 97 aa11.48□□□□□ -0.57
GTF2F1-201ENST00000394456 OR2B8PP59922 312 aa11.48□□□□□ -0.57
GTF2F1-201ENST00000394456 SPSB3Q6PJ21 355 aa11.48□□□□□ -0.57
GTF2F1-201ENST00000394456 Q6ZRM9 215 aa11.48□□□□□ -0.57
GTF2F1-201ENST00000394456 P4HA3Q7Z4N8 544 aa11.48□□□□□ -0.57
GTF2F1-201ENST00000394456 MRPL30Q8TCC3 161 aaKnown RBP11.48□□□□□ -0.57
GTF2F1-201ENST00000394456 TMEM56Q96MV1 263 aa11.48□□□□□ -0.57
GTF2F1-201ENST00000394456 ZNF391Q9UJN7 358 aa11.48□□□□□ -0.57
GTF2F1-201ENST00000394456 TMEM56-RWDD3S4R434 201 aa11.48□□□□□ -0.57
GTF2F1-201ENST00000394456 GTF3C1Q12789 2109 aa11.48□□□□□ -0.57
GTF2F1-201ENST00000394456 MGAQ8IWI9 3026 aa11.47□□□□□ -0.57
GTF2F1-201ENST00000394456 TRAPPC2LH3BP13 241 aa11.47□□□□□ -0.57
GTF2F1-201ENST00000394456 WT1P19544 449 aaPredicted RBP11.47□□□□□ -0.57
GTF2F1-201ENST00000394456 PAX9P55771 341 aa11.47□□□□□ -0.57
GTF2F1-201ENST00000394456 TMEM267Q0VDI3 215 aaPredicted RBP11.47□□□□□ -0.57
GTF2F1-201ENST00000394456 HNF4GQ14541 408 aa11.47□□□□□ -0.57
GTF2F1-201ENST00000394456 NMSQ5H8A3 153 aa11.47□□□□□ -0.57
GTF2F1-201ENST00000394456 POM121L2Q96KW2 1035 aa11.47□□□□□ -0.57
GTF2F1-201ENST00000394456 PGLYRP1O75594 196 aaPredicted RBP11.47□□□□□ -0.57
GTF2F1-201ENST00000394456 WISP2O76076 250 aa11.47□□□□□ -0.57
GTF2F1-201ENST00000394456 CDS2O95674 445 aa11.47□□□□□ -0.57
GTF2F1-201ENST00000394456 TFF1P04155 84 aa11.47□□□□□ -0.57
GTF2F1-201ENST00000394456 CELA3BP08861 270 aa11.47□□□□□ -0.57
GTF2F1-201ENST00000394456 ERVS71-1P61550 626 aa11.47□□□□□ -0.57
GTF2F1-201ENST00000394456 Q8NFD4 153 aa11.47□□□□□ -0.57
GTF2F1-201ENST00000394456 APH1AQ96BI3 265 aa11.47□□□□□ -0.57
GTF2F1-201ENST00000394456 SPRR3Q9UBC9 169 aa11.47□□□□□ -0.57
GTF2F1-201ENST00000394456 TUSC2O75896 110 aa11.46□□□□□ -0.57
GTF2F1-201ENST00000394456 PSG2P11465 335 aa11.46□□□□□ -0.57
GTF2F1-201ENST00000394456 SULT1A1P50225 295 aa11.46□□□□□ -0.57
GTF2F1-201ENST00000394456 ALKBH6Q3KRA9 238 aa11.46□□□□□ -0.57
GTF2F1-201ENST00000394456 ADAM5Q6NVV9 412 aa11.46□□□□□ -0.57
GTF2F1-201ENST00000394456 MCEMP1Q8IX19 187 aa11.46□□□□□ -0.57
GTF2F1-201ENST00000394456 ASCL3Q9NQ33 180 aa11.46□□□□□ -0.57
GTF2F1-201ENST00000394456 PLSCR2Q9NRY7 297 aa11.46□□□□□ -0.57
GTF2F1-201ENST00000394456 ERRFI1Q9UJM3 462 aaPredicted RBP11.46□□□□□ -0.57
GTF2F1-201ENST00000394456 GVINP1Q7Z2Y8 2422 aa11.46□□□□□ -0.57
GTF2F1-201ENST00000394456 DCHS1Q96JQ0 3298 aa11.46□□□□□ -0.57
GTF2F1-201ENST00000394456 PTAFRP25105 342 aa11.46□□□□□ -0.58
GTF2F1-201ENST00000394456 LINC00470Q9BZP3 86 aa11.46□□□□□ -0.58
GTF2F1-201ENST00000394456 RNF122Q9H9V4 155 aa11.46□□□□□ -0.58
GTF2F1-201ENST00000394456 H0YL77 283 aa11.45□□□□□ -0.58
GTF2F1-201ENST00000394456 WRBO00258 174 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms