RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 SLC39A5Q6ZMH5 540 aa11.93□□□□□ -0.5
USP49-203ENST00000394253 ZG16BQ96DA0 208 aa11.93□□□□□ -0.5
USP49-203ENST00000394253 CLN8Q9UBY8 286 aa11.93□□□□□ -0.5
USP49-203ENST00000394253 HS3ST3A1Q9Y663 406 aa11.93□□□□□ -0.5
USP49-203ENST00000394253 LINC00862A6NCI5 91 aa11.93□□□□□ -0.5
USP49-203ENST00000394253 BCL2P10415 239 aa11.93□□□□□ -0.5
USP49-203ENST00000394253 MMP9P14780 707 aa11.93□□□□□ -0.5
USP49-203ENST00000394253 SPNP16150 400 aa11.93□□□□□ -0.5
USP49-203ENST00000394253 OR10D3Q8NH80 312 aa11.93□□□□□ -0.5
USP49-203ENST00000394253 DPH3Q96FX2 82 aa11.93□□□□□ -0.5
USP49-203ENST00000394253 HCFC1P51610 2035 aa11.92□□□□□ -0.5
USP49-203ENST00000394253 HMX2A2RU54 273 aa11.92□□□□□ -0.5
USP49-203ENST00000394253 ZNF137PP52743 207 aa11.92□□□□□ -0.5
USP49-203ENST00000394253 OR10J6PQ8NGY7 276 aa11.92□□□□□ -0.5
USP49-203ENST00000394253 DUSP2Q05923 314 aa11.92□□□□□ -0.5
USP49-203ENST00000394253 PPIL1Q9Y3C6 166 aa11.92□□□□□ -0.5
USP49-203ENST00000394253 SORL1Q92673 2214 aa11.92□□□□□ -0.5
USP49-203ENST00000394253 IGKV6D-41A0A0C4DH26 115 aa11.92□□□□□ -0.5
USP49-203ENST00000394253 PLPP2O43688 288 aa11.92□□□□□ -0.5
USP49-203ENST00000394253 TMEM78Q5T7P6 136 aa11.92□□□□□ -0.5
USP49-203ENST00000394253 RPS19BP1Q86WX3 136 aaKnown RBP11.92□□□□□ -0.5
USP49-203ENST00000394253 OTOSQ8NHW6 89 aa11.92□□□□□ -0.5
USP49-203ENST00000394253 NUBPLQ8TB37 319 aa11.92□□□□□ -0.5
USP49-203ENST00000394253 ABHD14AQ9BUJ0 271 aa11.92□□□□□ -0.5
USP49-203ENST00000394253 FAM117AQ9C073 453 aa11.92□□□□□ -0.5
USP49-203ENST00000394253 ASCL3Q9NQ33 180 aa11.92□□□□□ -0.5
USP49-203ENST00000394253 RCC2Q9P258 522 aaKnown RBP11.92□□□□□ -0.5
USP49-203ENST00000394253 OPN4Q9UHM6 478 aa11.92□□□□□ -0.5
USP49-203ENST00000394253 FAM181BA6NEQ2 426 aa11.92□□□□□ -0.5
USP49-203ENST00000394253 IBA57Q5T440 356 aaKnown RBP11.92□□□□□ -0.5
USP49-203ENST00000394253 C19orf53Q9UNZ5 99 aaPredicted RBP11.92□□□□□ -0.5
USP49-203ENST00000394253 LRP12Q9Y561 859 aa11.92□□□□□ -0.5
USP49-203ENST00000394253 PPIAP62937 165 aaKnown RBP11.92□□□□□ -0.5
USP49-203ENST00000394253 LRRC75BQ2VPJ9 315 aa11.92□□□□□ -0.5
USP49-203ENST00000394253 LDLRAD3Q86YD5 345 aa11.92□□□□□ -0.5
USP49-203ENST00000394253 PAAF1Q9BRP4 392 aa11.92□□□□□ -0.5
USP49-203ENST00000394253 FGF21Q9NSA1 209 aa11.92□□□□□ -0.5
USP49-203ENST00000394253 TCRBV16S1A1N1A0A5B0 115 aa11.92□□□□□ -0.5
USP49-203ENST00000394253 LHFPL4Q7Z7J7 247 aa11.92□□□□□ -0.5
USP49-203ENST00000394253 FGF14Q92915 247 aa11.92□□□□□ -0.5
USP49-203ENST00000394253 SLIRPQ9GZT3 109 aaKnown RBP11.92□□□□□ -0.5
USP49-203ENST00000394253 ANKRD10Q9NXR5 420 aa11.92□□□□□ -0.5
USP49-203ENST00000394253 PLPP1O14494 284 aa11.92□□□□□ -0.5
USP49-203ENST00000394253 SPRY1O43609 319 aaPredicted RBP11.92□□□□□ -0.5
USP49-203ENST00000394253 HIST1H1AQ02539 215 aaPredicted RBP11.92□□□□□ -0.5
USP49-203ENST00000394253 MORN4Q8NDC4 146 aa11.92□□□□□ -0.5
USP49-203ENST00000394253 OR10S1Q8NGN2 331 aa11.92□□□□□ -0.5
USP49-203ENST00000394253 TMEM189A5PLL7 270 aa11.91□□□□□ -0.5
USP49-203ENST00000394253 TARM1B6A8C7 271 aa11.91□□□□□ -0.5
USP49-203ENST00000394253 TMEM189-UBE2V1I3L0A0 370 aa11.91□□□□□ -0.5
USP49-203ENST00000394253 NTHL1P78549 312 aa11.91□□□□□ -0.5
USP49-203ENST00000394253 ZNF740Q8NDX6 193 aa11.91□□□□□ -0.5
USP49-203ENST00000394253 ARFGEF1Q9Y6D6 1849 aa11.91□□□□□ -0.5
USP49-203ENST00000394253 OR11H12B2RN74 326 aa11.91□□□□□ -0.5
USP49-203ENST00000394253 C2orf83Q53S99 150 aa11.91□□□□□ -0.5
USP49-203ENST00000394253 OR11H1Q8NG94 326 aa11.91□□□□□ -0.5
USP49-203ENST00000394253 OR11H2Q8NH07 326 aa11.91□□□□□ -0.5
USP49-203ENST00000394253 PLXND1Q9Y4D7 1925 aa11.91□□□□□ -0.5
USP49-203ENST00000394253 OR4A8P0C604 315 aa11.91□□□□□ -0.5
USP49-203ENST00000394253 STPG3Q8N7X2 389 aa11.91□□□□□ -0.5
USP49-203ENST00000394253 KIR3DX1Q9H7L2 352 aa11.91□□□□□ -0.5
USP49-203ENST00000394253 LYPD8Q6UX82 237 aa11.91□□□□□ -0.5
USP49-203ENST00000394253 NRIP2Q9BQI9 281 aa11.91□□□□□ -0.5
USP49-203ENST00000394253 CREBBPQ92793 2442 aa11.91□□□□□ -0.5
USP49-203ENST00000394253 SLC25A42Q86VD7 318 aa11.91□□□□□ -0.5
USP49-203ENST00000394253 TREM2Q9NZC2 230 aa11.91□□□□□ -0.5
USP49-203ENST00000394253 PPP6CO00743 305 aa11.91□□□□□ -0.5
USP49-203ENST00000394253 TM4SF20Q53R12 229 aa11.91□□□□□ -0.5
USP49-203ENST00000394253 NKAIN4Q8IVV8 208 aa11.91□□□□□ -0.5
USP49-203ENST00000394253 OR4C3Q8NH37 302 aa11.91□□□□□ -0.5
USP49-203ENST00000394253 OR4X1Q8NH49 305 aa11.91□□□□□ -0.5
USP49-203ENST00000394253 ZNF414Q96IQ9 312 aa11.91□□□□□ -0.5
USP49-203ENST00000394253 GHITMQ9H3K2 345 aa11.91□□□□□ -0.5
USP49-203ENST00000394253 WNK3Q9BYP7 1800 aa11.91□□□□□ -0.5
USP49-203ENST00000394253 ADAP1O75689 374 aa11.91□□□□□ -0.5
USP49-203ENST00000394253 SUMO2P61956 95 aaKnown RBP11.91□□□□□ -0.5
USP49-203ENST00000394253 KCNMB1Q16558 191 aa11.91□□□□□ -0.5
USP49-203ENST00000394253 IGHV3-64DA0A0J9YX35 117 aa11.9□□□□□ -0.5
USP49-203ENST00000394253 M0QZQ0 153 aa11.9□□□□□ -0.5
USP49-203ENST00000394253 SUMO3P55854 103 aaPredicted RBP11.9□□□□□ -0.5
USP49-203ENST00000394253 METTL1Q9UBP6 276 aaKnown RBP11.9□□□□□ -0.5
USP49-203ENST00000394253 KNDC1Q76NI1 1749 aa11.9□□□□□ -0.5
USP49-203ENST00000394253 SLC25A1P53007 311 aa11.9□□□□□ -0.5
USP49-203ENST00000394253 PITX1P78337 314 aaPredicted RBP11.9□□□□□ -0.5
USP49-203ENST00000394253 GUCA2AQ02747 115 aa11.9□□□□□ -0.5
USP49-203ENST00000394253 BTLAQ7Z6A9 289 aa11.9□□□□□ -0.5
USP49-203ENST00000394253 CYB561D1Q8N8Q1 229 aa11.9□□□□□ -0.5
USP49-203ENST00000394253 TMUB1Q9BVT8 246 aa11.9□□□□□ -0.5
USP49-203ENST00000394253 ARAP2Q8WZ64 1704 aa11.9□□□□□ -0.5
USP49-203ENST00000394253 CDC14BO60729 498 aa11.9□□□□□ -0.5
USP49-203ENST00000394253 FAM222BQ8WU58 562 aa11.9□□□□□ -0.5
USP49-203ENST00000394253 STARD10Q9Y365 291 aa11.9□□□□□ -0.5
USP49-203ENST00000394253 C7orf71A4D174 169 aa11.9□□□□□ -0.5
USP49-203ENST00000394253 PDCD6O75340 191 aa11.9□□□□□ -0.5
USP49-203ENST00000394253 B4GALNT1Q00973 533 aa11.9□□□□□ -0.5
USP49-203ENST00000394253 EBLN2Q6P2I7 272 aa11.9□□□□□ -0.5
USP49-203ENST00000394253 LINC00596Q86U02 117 aa11.9□□□□□ -0.5
USP49-203ENST00000394253 NEU3Q9UQ49 428 aa11.9□□□□□ -0.5
USP49-203ENST00000394253 PRSS21Q9Y6M0 314 aa11.9□□□□□ -0.5
USP49-203ENST00000394253 COL14A1Q05707 1796 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms