RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 ZNF184Q99676 751 aaPredicted RBP14.44□□□□□ -0.1
PDLIM7-205ENST00000393551 PCDHB16Q9NRJ7 776 aa14.44□□□□□ -0.1
PDLIM7-205ENST00000393551 GPX5O75715 221 aa14.43□□□□□ -0.1
PDLIM7-205ENST00000393551 RAB7AP51149 207 aa14.43□□□□□ -0.1
PDLIM7-205ENST00000393551 PPP3R1P63098 170 aa14.43□□□□□ -0.1
PDLIM7-205ENST00000393551 LRRC36Q1X8D7 754 aa14.43□□□□□ -0.1
PDLIM7-205ENST00000393551 LAIR2Q6ISS4 152 aa14.43□□□□□ -0.1
PDLIM7-205ENST00000393551 ETV3LQ6ZN32 361 aa14.43□□□□□ -0.1
PDLIM7-205ENST00000393551 C18orf65Q6ZTR6 163 aa14.43□□□□□ -0.1
PDLIM7-205ENST00000393551 OR8H3Q8N146 312 aa14.43□□□□□ -0.1
PDLIM7-205ENST00000393551 RBMXL1Q96E39 390 aaKnown RBP14.43□□□□□ -0.1
PDLIM7-205ENST00000393551 TMEM30CPA0ZSE6 113 aa14.42□□□□□ -0.1
PDLIM7-205ENST00000393551 PSMB11A5LHX3 300 aa14.42□□□□□ -0.1
PDLIM7-205ENST00000393551 LINC01548A6NM66 108 aa14.42□□□□□ -0.1
PDLIM7-205ENST00000393551 IGKV1D-33P01593 117 aa14.42□□□□□ -0.1
PDLIM7-205ENST00000393551 IGKV1-33P01594 117 aa14.42□□□□□ -0.1
PDLIM7-205ENST00000393551 CSTBP04080 98 aaKnown RBP14.42□□□□□ -0.1
PDLIM7-205ENST00000393551 TMEM11P17152 192 aa14.42□□□□□ -0.1
PDLIM7-205ENST00000393551 GZMHP20718 246 aa14.42□□□□□ -0.1
PDLIM7-205ENST00000393551 REG1BP48304 166 aa14.42□□□□□ -0.1
PDLIM7-205ENST00000393551 KRTAP10-11P60412 298 aa14.42□□□□□ -0.1
PDLIM7-205ENST00000393551 ADARB1P78563 741 aaKnown RBP14.42□□□□□ -0.1
PDLIM7-205ENST00000393551 ZNF816Q0VGE8 651 aaPredicted RBP14.42□□□□□ -0.1
PDLIM7-205ENST00000393551 RIPK1Q13546 671 aa14.42□□□□□ -0.1
PDLIM7-205ENST00000393551 EBI3Q14213 229 aa14.42□□□□□ -0.1
PDLIM7-205ENST00000393551 HES1Q14469 280 aa14.42□□□□□ -0.1
PDLIM7-205ENST00000393551 SLC22A6Q4U2R8 563 aa14.42□□□□□ -0.1
PDLIM7-205ENST00000393551 OR10X1Q8NGY0 326 aa14.42□□□□□ -0.1
PDLIM7-205ENST00000393551 CCDC107Q8WV48 283 aa14.42□□□□□ -0.1
PDLIM7-205ENST00000393551 GGHQ92820 318 aa14.42□□□□□ -0.1
PDLIM7-205ENST00000393551 LINC00527Q9UJ94 153 aa14.42□□□□□ -0.1
PDLIM7-205ENST00000393551 EXOSC1Q9Y3B2 195 aaKnown RBP14.42□□□□□ -0.1
PDLIM7-205ENST00000393551 TRBV5-7A0A0A0MS05 114 aa14.41□□□□□ -0.1
PDLIM7-205ENST00000393551 IGHV1-3A0A0C4DH29 117 aa14.41□□□□□ -0.1
PDLIM7-205ENST00000393551 A0A1W2PPK0 400 aa14.41□□□□□ -0.1
PDLIM7-205ENST00000393551 HSD17B6O14756 317 aa14.41□□□□□ -0.1
PDLIM7-205ENST00000393551 FGF16O43320 207 aa14.41□□□□□ -0.1
PDLIM7-205ENST00000393551 PF4P02776 101 aa14.41□□□□□ -0.1
PDLIM7-205ENST00000393551 MT-ND4P03905 459 aa14.41□□□□□ -0.1
PDLIM7-205ENST00000393551 MYL12AP19105 171 aa14.41□□□□□ -0.1
PDLIM7-205ENST00000393551 MPV17LQ2QL34 196 aa14.41□□□□□ -0.1
PDLIM7-205ENST00000393551 Q499Y3 187 aa14.41□□□□□ -0.1
PDLIM7-205ENST00000393551 KHDC1LQ5JSQ8 128 aa14.41□□□□□ -0.1
PDLIM7-205ENST00000393551 ATAD3CQ5T2N8 411 aa14.41□□□□□ -0.1
PDLIM7-205ENST00000393551 ZNF497Q6ZNH5 498 aa14.41□□□□□ -0.1
PDLIM7-205ENST00000393551 LINC00596Q86U02 117 aa14.41□□□□□ -0.1
PDLIM7-205ENST00000393551 LYPD6Q86Y78 171 aa14.41□□□□□ -0.1
PDLIM7-205ENST00000393551 LINC00482Q8N8I6 264 aa14.41□□□□□ -0.1
PDLIM7-205ENST00000393551 OR52M1Q8NGK5 317 aa14.41□□□□□ -0.1
PDLIM7-205ENST00000393551 CYGBQ8WWM9 190 aa14.41□□□□□ -0.1
PDLIM7-205ENST00000393551 ARL11Q969Q4 196 aa14.41□□□□□ -0.1
PDLIM7-205ENST00000393551 ST6GALNAC6Q969X2 333 aa14.41□□□□□ -0.1
PDLIM7-205ENST00000393551 TMEM80Q96HE8 168 aa14.41□□□□□ -0.1
PDLIM7-205ENST00000393551 RCC2Q9P258 522 aaKnown RBP14.41□□□□□ -0.1
PDLIM7-205ENST00000393551 RRP15Q9Y3B9 282 aaKnown RBP14.41□□□□□ -0.1
PDLIM7-205ENST00000393551 IGHV3-43A0A0B4J1X8 118 aa14.4□□□□□ -0.1
PDLIM7-205ENST00000393551 IGHV3-72A0A0B4J1Y9 119 aa14.4□□□□□ -0.1
PDLIM7-205ENST00000393551 IRGMA1A4Y4 181 aa14.4□□□□□ -0.1
PDLIM7-205ENST00000393551 K7EIL1 84 aa14.4□□□□□ -0.1
PDLIM7-205ENST00000393551 SLC31A2O15432 143 aa14.4□□□□□ -0.1
PDLIM7-205ENST00000393551 IGHG2P01859 326 aa14.4□□□□□ -0.1
PDLIM7-205ENST00000393551 IGHV3-43DP0DP04 118 aa14.4□□□□□ -0.1
PDLIM7-205ENST00000393551 FSTP19883 344 aa14.4□□□□□ -0.1
PDLIM7-205ENST00000393551 ST3GAL4Q11206 333 aa14.4□□□□□ -0.1
PDLIM7-205ENST00000393551 YIF1BQ5BJH7 314 aa14.4□□□□□ -0.1
PDLIM7-205ENST00000393551 LINC00311Q8N616 119 aa14.4□□□□□ -0.1
PDLIM7-205ENST00000393551 Q8N6K4 173 aa14.4□□□□□ -0.1
PDLIM7-205ENST00000393551 TMEM104Q8NE00 496 aa14.4□□□□□ -0.1
PDLIM7-205ENST00000393551 EAF1Q96JC9 268 aaPredicted RBP14.4□□□□□ -0.1
PDLIM7-205ENST00000393551 OR14A2Q96R54 314 aa14.4□□□□□ -0.1
PDLIM7-205ENST00000393551 PAK1IP1Q9NWT1 392 aaPredicted RBP14.4□□□□□ -0.1
PDLIM7-205ENST00000393551 GFOD1Q9NXC2 390 aa14.4□□□□□ -0.1
PDLIM7-205ENST00000393551 CCRL2O00421 344 aa14.39□□□□□ -0.11
PDLIM7-205ENST00000393551 SDCBPO00560 298 aaPredicted RBP14.39□□□□□ -0.11
PDLIM7-205ENST00000393551 ORC5O43913 435 aa14.39□□□□□ -0.11
PDLIM7-205ENST00000393551 ZNF780AO75290 641 aaPredicted RBP14.39□□□□□ -0.11
PDLIM7-205ENST00000393551 MPIG6BO95866 241 aa14.39□□□□□ -0.11
PDLIM7-205ENST00000393551 GNAO1P09471 354 aa14.39□□□□□ -0.11
PDLIM7-205ENST00000393551 GTF2F2P13984 249 aa14.39□□□□□ -0.11
PDLIM7-205ENST00000393551 ZNF134P52741 427 aa14.39□□□□□ -0.11
PDLIM7-205ENST00000393551 RPL23AP62750 156 aaKnown RBP14.39□□□□□ -0.11
PDLIM7-205ENST00000393551 SLC35A2P78381 396 aa14.39□□□□□ -0.11
PDLIM7-205ENST00000393551 MOB3BQ86TA1 216 aa14.39□□□□□ -0.11
PDLIM7-205ENST00000393551 MRPL41Q8IXM3 137 aaKnown RBP14.39□□□□□ -0.11
PDLIM7-205ENST00000393551 GAPTQ8N292 157 aa14.39□□□□□ -0.11
PDLIM7-205ENST00000393551 C8orf31Q8N9H6 132 aa14.39□□□□□ -0.11
PDLIM7-205ENST00000393551 ZNF439Q8NDP4 499 aa14.39□□□□□ -0.11
PDLIM7-205ENST00000393551 MUL1Q969V5 352 aa14.39□□□□□ -0.11
PDLIM7-205ENST00000393551 RCC1LQ96I51 464 aaKnown RBP14.39□□□□□ -0.11
PDLIM7-205ENST00000393551 S100A13Q99584 98 aa14.39□□□□□ -0.11
PDLIM7-205ENST00000393551 PLSCR3Q9NRY6 295 aa14.39□□□□□ -0.11
PDLIM7-205ENST00000393551 PNMA8CA0A1B0GUJ8 204 aa14.38□□□□□ -0.11
PDLIM7-205ENST00000393551 ZNF736B4DX44 427 aaPredicted RBP14.38□□□□□ -0.11
PDLIM7-205ENST00000393551 C12orf77C9JDV5 145 aa14.38□□□□□ -0.11
PDLIM7-205ENST00000393551 GAPDHP04406 335 aaKnown RBP14.38□□□□□ -0.11
PDLIM7-205ENST00000393551 TTC23Q5W5X9 447 aa14.38□□□□□ -0.11
PDLIM7-205ENST00000393551 GLIPR1L1Q6UWM5 242 aa14.38□□□□□ -0.11
PDLIM7-205ENST00000393551 OR2W3Q7Z3T1 314 aa14.38□□□□□ -0.11
PDLIM7-205ENST00000393551 IZUMO1Q8IYV9 350 aa14.38□□□□□ -0.11
PDLIM7-205ENST00000393551 CHPT1Q8WUD6 406 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms