RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 A0A1B0GV72 72 aa14.2□□□□□ -0.14
SHANK1-204ENST00000391814 ACP1P24666 158 aa14.2□□□□□ -0.14
SHANK1-204ENST00000391814 C21orf58P58505 322 aa14.2□□□□□ -0.14
SHANK1-204ENST00000391814 GPA33Q99795 319 aa14.2□□□□□ -0.14
SHANK1-204ENST00000391814 IER2Q9BTL4 223 aa14.2□□□□□ -0.14
SHANK1-204ENST00000391814 IL36RNQ9UBH0 155 aa14.2□□□□□ -0.14
SHANK1-204ENST00000391814 FCARP24071 287 aa14.2□□□□□ -0.14
SHANK1-204ENST00000391814 PMCHL1Q16048 86 aa14.2□□□□□ -0.14
SHANK1-204ENST00000391814 MARVELD3Q96A59 401 aa14.2□□□□□ -0.14
SHANK1-204ENST00000391814 SOSTQ9BQB4 213 aa14.2□□□□□ -0.14
SHANK1-204ENST00000391814 SMDT1Q9H4I9 107 aa14.2□□□□□ -0.14
SHANK1-204ENST00000391814 GRIFINA4D1Z8 144 aa14.19□□□□□ -0.14
SHANK1-204ENST00000391814 RELBQ01201 579 aa14.19□□□□□ -0.14
SHANK1-204ENST00000391814 DGAT2L7PQ6IED9 249 aa14.19□□□□□ -0.14
SHANK1-204ENST00000391814 SLC23A3Q6PIS1 610 aa14.19□□□□□ -0.14
SHANK1-204ENST00000391814 ZFC3H1O60293 1989 aaKnown RBP14.19□□□□□ -0.14
SHANK1-204ENST00000391814 FOCADQ5VW36 1801 aa14.19□□□□□ -0.14
SHANK1-204ENST00000391814 VSIG8P0DPA2 414 aa14.19□□□□□ -0.14
SHANK1-204ENST00000391814 PMELP40967 661 aa14.19□□□□□ -0.14
SHANK1-204ENST00000391814 DLX1P56177 255 aa14.19□□□□□ -0.14
SHANK1-204ENST00000391814 TWIST1Q15672 202 aa14.19□□□□□ -0.14
SHANK1-204ENST00000391814 SPACA9Q96E40 222 aaPredicted RBP14.19□□□□□ -0.14
SHANK1-204ENST00000391814 TMEM38BQ9NVV0 291 aa14.19□□□□□ -0.14
SHANK1-204ENST00000391814 TMSB15BA0A087X1C1 80 aa14.19□□□□□ -0.14
SHANK1-204ENST00000391814 DHRS7CA6NNS2 312 aa14.19□□□□□ -0.14
SHANK1-204ENST00000391814 MS4A18H0YCH9 400 aa14.19□□□□□ -0.14
SHANK1-204ENST00000391814 H2BFSP57053 126 aa14.19□□□□□ -0.14
SHANK1-204ENST00000391814 MS4A18Q3C1V0 323 aa14.19□□□□□ -0.14
SHANK1-204ENST00000391814 KIAA1551Q9HCM1 1747 aa14.19□□□□□ -0.14
SHANK1-204ENST00000391814 DNASE2O00115 360 aaPredicted RBP14.19□□□□□ -0.14
SHANK1-204ENST00000391814 CD27P26842 260 aa14.19□□□□□ -0.14
SHANK1-204ENST00000391814 A0A1B0GU03 582 aa14.19□□□□□ -0.14
SHANK1-204ENST00000391814 MYF5P13349 255 aa14.18□□□□□ -0.14
SHANK1-204ENST00000391814 GBGT1Q8N5D6 347 aa14.18□□□□□ -0.14
SHANK1-204ENST00000391814 IGKV3-7A0A075B6H7 116 aa14.18□□□□□ -0.14
SHANK1-204ENST00000391814 TRGV8A0A0C4DH27 118 aa14.18□□□□□ -0.14
SHANK1-204ENST00000391814 PRF1P14222 555 aa14.18□□□□□ -0.14
SHANK1-204ENST00000391814 FAM53BQ14153 422 aa14.18□□□□□ -0.14
SHANK1-204ENST00000391814 LINC01555Q8NAE3 123 aa14.18□□□□□ -0.14
SHANK1-204ENST00000391814 PARLQ9H300 379 aa14.18□□□□□ -0.14
SHANK1-204ENST00000391814 VDAC1P21796 283 aa14.18□□□□□ -0.14
SHANK1-204ENST00000391814 LRRC10Q5BKY1 277 aa14.18□□□□□ -0.14
SHANK1-204ENST00000391814 NRTNQ99748 197 aa14.18□□□□□ -0.14
SHANK1-204ENST00000391814 KLF7O75840 302 aaPredicted RBP14.18□□□□□ -0.14
SHANK1-204ENST00000391814 ZPLD1Q8TCW7 415 aa14.18□□□□□ -0.14
SHANK1-204ENST00000391814 ADTRPQ96IZ2 230 aa14.18□□□□□ -0.14
SHANK1-204ENST00000391814 CDK5RAP2Q96SN8 1893 aa14.17□□□□□ -0.14
SHANK1-204ENST00000391814 MT-CO3P00414 261 aa14.17□□□□□ -0.14
SHANK1-204ENST00000391814 NANOS3P60323 173 aaKnown RBP14.17□□□□□ -0.14
SHANK1-204ENST00000391814 IL36GQ9NZH8 169 aa14.17□□□□□ -0.14
SHANK1-204ENST00000391814 A0A1W2PRD5 423 aa14.17□□□□□ -0.14
SHANK1-204ENST00000391814 A0A1W2PRF3 423 aa14.17□□□□□ -0.14
SHANK1-204ENST00000391814 A0A1W2PRM7 423 aa14.17□□□□□ -0.14
SHANK1-204ENST00000391814 M0R296 226 aa14.17□□□□□ -0.14
SHANK1-204ENST00000391814 IL2RAP01589 272 aa14.17□□□□□ -0.14
SHANK1-204ENST00000391814 GLIPR1P48060 266 aa14.17□□□□□ -0.14
SHANK1-204ENST00000391814 MGAT2Q10469 447 aa14.17□□□□□ -0.14
SHANK1-204ENST00000391814 SLC25A34Q6PIV7 304 aa14.17□□□□□ -0.14
SHANK1-204ENST00000391814 OR4X1Q8NH49 305 aa14.17□□□□□ -0.14
SHANK1-204ENST00000391814 OR1L1Q8NH94 360 aa14.17□□□□□ -0.14
SHANK1-204ENST00000391814 NRAPQ86VF7 1730 aa14.17□□□□□ -0.14
SHANK1-204ENST00000391814 OR4C45A6NMZ5 311 aa14.17□□□□□ -0.14
SHANK1-204ENST00000391814 HOGA1Q86XE5 327 aa14.17□□□□□ -0.14
SHANK1-204ENST00000391814 TMEM183AQ8IXX5 376 aa14.17□□□□□ -0.14
SHANK1-204ENST00000391814 OR1N2Q8NGR9 330 aa14.17□□□□□ -0.14
SHANK1-204ENST00000391814 WDR34Q96EX3 536 aa14.17□□□□□ -0.14
SHANK1-204ENST00000391814 MRPS18AQ9NVS2 196 aaKnown RBP14.17□□□□□ -0.14
SHANK1-204ENST00000391814 CISD1Q9NZ45 108 aaKnown RBP14.17□□□□□ -0.14
SHANK1-204ENST00000391814 PRRG2O14669 202 aa14.17□□□□□ -0.14
SHANK1-204ENST00000391814 NDUFB3O43676 98 aa14.17□□□□□ -0.14
SHANK1-204ENST00000391814 TNXAQ16473 311 aa14.17□□□□□ -0.14
SHANK1-204ENST00000391814 PPIL1Q9Y3C6 166 aa14.17□□□□□ -0.14
SHANK1-204ENST00000391814 SHISA7A6NL88 538 aa14.17□□□□□ -0.14
SHANK1-204ENST00000391814 LDLRAD4O15165 306 aa14.17□□□□□ -0.14
SHANK1-204ENST00000391814 RPL30P62888 115 aaKnown RBP14.17□□□□□ -0.14
SHANK1-204ENST00000391814 WIPI1Q5MNZ9 446 aaPredicted RBP14.17□□□□□ -0.14
SHANK1-204ENST00000391814 CALHM1Q8IU99 346 aa14.17□□□□□ -0.14
SHANK1-204ENST00000391814 RNF133Q8WVZ7 376 aa14.17□□□□□ -0.14
SHANK1-204ENST00000391814 ALX4Q9H161 411 aaPredicted RBP14.17□□□□□ -0.14
SHANK1-204ENST00000391814 ZNF576Q9H609 170 aa14.17□□□□□ -0.14
SHANK1-204ENST00000391814 EVPLQ92817 2033 aa14.17□□□□□ -0.14
SHANK1-204ENST00000391814 TRBV5-3A0A0A0MS03 114 aa14.16□□□□□ -0.14
SHANK1-204ENST00000391814 SRSF5Q13243 272 aaKnown RBP14.16□□□□□ -0.14
SHANK1-204ENST00000391814 ZNF506Q5JVG8 444 aa14.16□□□□□ -0.14
SHANK1-204ENST00000391814 MFAP2P55001 183 aa14.16□□□□□ -0.14
SHANK1-204ENST00000391814 CBLN3Q6UW01 205 aa14.16□□□□□ -0.14
SHANK1-204ENST00000391814 ZNF788Q6ZQV5 615 aa14.16□□□□□ -0.14
SHANK1-204ENST00000391814 ST6GALNAC3Q8NDV1 305 aa14.16□□□□□ -0.14
SHANK1-204ENST00000391814 OOEPA6NGQ2 149 aa14.16□□□□□ -0.14
SHANK1-204ENST00000391814 HLA-DQB1P01920 261 aa14.16□□□□□ -0.14
SHANK1-204ENST00000391814 SMAD4Q13485 552 aaKnown RBP14.16□□□□□ -0.14
SHANK1-204ENST00000391814 HIST1H4GQ99525 98 aa14.16□□□□□ -0.14
SHANK1-204ENST00000391814 IL19Q9UHD0 177 aa14.16□□□□□ -0.14
SHANK1-204ENST00000391814 CCL27Q9Y4X3 112 aa14.16□□□□□ -0.14
SHANK1-204ENST00000391814 BTF3P20290 206 aaKnown RBP14.16□□□□□ -0.14
SHANK1-204ENST00000391814 ERASQ7Z444 233 aa14.16□□□□□ -0.14
SHANK1-204ENST00000391814 LRRC29Q8WV35 223 aa14.16□□□□□ -0.14
SHANK1-204ENST00000391814 COL25A1Q9BXS0 654 aaPredicted RBP14.16□□□□□ -0.14
SHANK1-204ENST00000391814 SEBOXQ9HB31 216 aaPredicted RBP14.16□□□□□ -0.14
SHANK1-204ENST00000391814 PTPMT1Q8WUK0 201 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms