RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 C11orf1Q9H5F2 150 aa16.41■□□□□ 0.22
SMARCD1-201ENST00000381513 KLHL13Q9P2N7 655 aa16.41■□□□□ 0.22
SMARCD1-201ENST00000381513 UQCR10Q9UDW1 63 aa16.41■□□□□ 0.22
SMARCD1-201ENST00000381513 SLC17A4Q9Y2C5 497 aa16.41■□□□□ 0.22
SMARCD1-201ENST00000381513 DIRC3C9JPN6 131 aa16.4■□□□□ 0.22
SMARCD1-201ENST00000381513 DAP3P51398 398 aaKnown RBP16.4■□□□□ 0.22
SMARCD1-201ENST00000381513 PPP1CAP62136 330 aa16.4■□□□□ 0.22
SMARCD1-201ENST00000381513 FBLN7Q53RD9 439 aa16.4■□□□□ 0.22
SMARCD1-201ENST00000381513 OR4B1Q8NGF8 309 aa16.4■□□□□ 0.22
SMARCD1-201ENST00000381513 LRRC3BQ96PB8 259 aa16.4■□□□□ 0.22
SMARCD1-201ENST00000381513 TMEM222Q9H0R3 208 aa16.4■□□□□ 0.22
SMARCD1-201ENST00000381513 NCOR1P1Q9H4R4 102 aa16.4■□□□□ 0.22
SMARCD1-201ENST00000381513 PLSCR2Q9NRY7 297 aa16.4■□□□□ 0.22
SMARCD1-201ENST00000381513 FOXI3A8MTJ6 420 aaPredicted RBP16.4■□□□□ 0.22
SMARCD1-201ENST00000381513 IL33O95760 270 aa16.4■□□□□ 0.22
SMARCD1-201ENST00000381513 UBE2NP61088 152 aaKnown RBP16.4■□□□□ 0.22
SMARCD1-201ENST00000381513 SRPXP78539 464 aa16.4■□□□□ 0.22
SMARCD1-201ENST00000381513 TMPRSS7Q7RTY8 843 aa16.4■□□□□ 0.22
SMARCD1-201ENST00000381513 TBC1D26Q86UD7 250 aa16.4■□□□□ 0.22
SMARCD1-201ENST00000381513 GCNT2Q8N0V5 402 aa16.4■□□□□ 0.22
SMARCD1-201ENST00000381513 SLC25A22Q9H936 323 aa16.4■□□□□ 0.22
SMARCD1-201ENST00000381513 RNF115Q9Y4L5 304 aa16.4■□□□□ 0.22
SMARCD1-201ENST00000381513 A0A1W2PQU0 124 aa16.4■□□□□ 0.22
SMARCD1-201ENST00000381513 F5H5K5 113 aa16.4■□□□□ 0.22
SMARCD1-201ENST00000381513 TNFSF14O43557 240 aa16.4■□□□□ 0.22
SMARCD1-201ENST00000381513 SPRY1O43609 319 aaPredicted RBP16.4■□□□□ 0.22
SMARCD1-201ENST00000381513 TYMSP04818 313 aa16.4■□□□□ 0.22
SMARCD1-201ENST00000381513 CRISP2P16562 243 aa16.4■□□□□ 0.22
SMARCD1-201ENST00000381513 RSPO4Q2I0M5 234 aaPredicted RBP16.4■□□□□ 0.22
SMARCD1-201ENST00000381513 FFAR4Q5NUL3 377 aa16.4■□□□□ 0.22
SMARCD1-201ENST00000381513 CADM4Q8NFZ8 388 aa16.4■□□□□ 0.22
SMARCD1-201ENST00000381513 BAHD1Q8TBE0 780 aaPredicted RBP16.4■□□□□ 0.22
SMARCD1-201ENST00000381513 GATAD1Q8WUU5 269 aa16.4■□□□□ 0.22
SMARCD1-201ENST00000381513 MBD3L1Q8WWY6 194 aa16.4■□□□□ 0.22
SMARCD1-201ENST00000381513 APOOQ9BUR5 198 aa16.4■□□□□ 0.22
SMARCD1-201ENST00000381513 ATG2BQ96BY7 2078 aa16.39■□□□□ 0.21
SMARCD1-201ENST00000381513 A0A1W2PQ45 241 aaPredicted RBP16.39■□□□□ 0.21
SMARCD1-201ENST00000381513 A0A1W2PQY0 241 aa16.39■□□□□ 0.21
SMARCD1-201ENST00000381513 C5orf63A6NC05 138 aa16.39■□□□□ 0.21
SMARCD1-201ENST00000381513 F6UZH7 168 aa16.39■□□□□ 0.21
SMARCD1-201ENST00000381513 YPEL1O60688 119 aa16.39■□□□□ 0.21
SMARCD1-201ENST00000381513 IAPPP10997 89 aa16.39■□□□□ 0.21
SMARCD1-201ENST00000381513 VIPR2P41587 438 aa16.39■□□□□ 0.21
SMARCD1-201ENST00000381513 FBXW4P57775 412 aa16.39■□□□□ 0.21
SMARCD1-201ENST00000381513 SIGLECL1Q8N7X8 197 aa16.39■□□□□ 0.21
SMARCD1-201ENST00000381513 YPEL2Q96QA6 119 aa16.39■□□□□ 0.21
SMARCD1-201ENST00000381513 PXMP4Q9Y6I8 212 aa16.39■□□□□ 0.21
SMARCD1-201ENST00000381513 PRSS38A1L453 326 aa16.39■□□□□ 0.21
SMARCD1-201ENST00000381513 RPL19P84098 196 aaKnown RBP16.39■□□□□ 0.21
SMARCD1-201ENST00000381513 DLX2Q07687 328 aaPredicted RBP16.39■□□□□ 0.21
SMARCD1-201ENST00000381513 OOSP2Q86WS3 158 aa16.39■□□□□ 0.21
SMARCD1-201ENST00000381513 KMT5CQ86Y97 462 aa16.39■□□□□ 0.21
SMARCD1-201ENST00000381513 PSMF1Q92530 271 aa16.39■□□□□ 0.21
SMARCD1-201ENST00000381513 ELSPBP1Q96BH3 223 aa16.39■□□□□ 0.21
SMARCD1-201ENST00000381513 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.39■□□□□ 0.21
SMARCD1-201ENST00000381513 EGR1P18146 543 aa16.38■□□□□ 0.21
SMARCD1-201ENST00000381513 BMP5P22003 454 aa16.38■□□□□ 0.21
SMARCD1-201ENST00000381513 UBE2G2P60604 165 aa16.38■□□□□ 0.21
SMARCD1-201ENST00000381513 ZNF468Q5VIY5 522 aaPredicted RBP16.38■□□□□ 0.21
SMARCD1-201ENST00000381513 SGMS2Q8NHU3 365 aa16.38■□□□□ 0.21
SMARCD1-201ENST00000381513 KCNK17Q96T54 332 aa16.38■□□□□ 0.21
SMARCD1-201ENST00000381513 MOB1AQ9H8S9 216 aa16.38■□□□□ 0.21
SMARCD1-201ENST00000381513 COX11Q9Y6N1 276 aa16.38■□□□□ 0.21
SMARCD1-201ENST00000381513 A0A1W2PN81 502 aa16.38■□□□□ 0.21
SMARCD1-201ENST00000381513 H3BML4 177 aa16.38■□□□□ 0.21
SMARCD1-201ENST00000381513 LCN2P80188 198 aa16.38■□□□□ 0.21
SMARCD1-201ENST00000381513 FUT7Q11130 342 aa16.38■□□□□ 0.21
SMARCD1-201ENST00000381513 BET1LQ9NYM9 111 aa16.38■□□□□ 0.21
SMARCD1-201ENST00000381513 LHFPL6Q9Y693 200 aa16.38■□□□□ 0.21
SMARCD1-201ENST00000381513 SEMA4FO95754 770 aa16.38■□□□□ 0.21
SMARCD1-201ENST00000381513 IFI6P09912 130 aa16.38■□□□□ 0.21
SMARCD1-201ENST00000381513 RPL15P61313 204 aaKnown RBP16.38■□□□□ 0.21
SMARCD1-201ENST00000381513 SHBQ15464 509 aa16.38■□□□□ 0.21
SMARCD1-201ENST00000381513 IZUMO4Q1ZYL8 232 aa16.38■□□□□ 0.21
SMARCD1-201ENST00000381513 SELENOHQ8IZQ5 122 aaKnown RBP16.38■□□□□ 0.21
SMARCD1-201ENST00000381513 SLC46A1Q96NT5 459 aa16.38■□□□□ 0.21
SMARCD1-201ENST00000381513 TM2D1Q9BX74 207 aa16.38■□□□□ 0.21
SMARCD1-201ENST00000381513 ZNF586Q9NXT0 402 aa16.38■□□□□ 0.21
SMARCD1-201ENST00000381513 HTTP42858 3142 aa16.37■□□□□ 0.21
SMARCD1-201ENST00000381513 TRAV39A0A0B4J263 110 aa16.37■□□□□ 0.21
SMARCD1-201ENST00000381513 C2orf72A6NCS6 295 aa16.37■□□□□ 0.21
SMARCD1-201ENST00000381513 MS4A18H0YCH9 400 aa16.37■□□□□ 0.21
SMARCD1-201ENST00000381513 PPYP01298 95 aa16.37■□□□□ 0.21
SMARCD1-201ENST00000381513 MS4A18Q3C1V0 323 aa16.37■□□□□ 0.21
SMARCD1-201ENST00000381513 MMABQ96EY8 250 aaPredicted RBP16.37■□□□□ 0.21
SMARCD1-201ENST00000381513 NUDT11Q96G61 164 aa16.37■□□□□ 0.21
SMARCD1-201ENST00000381513 AGMATQ9BSE5 352 aa16.37■□□□□ 0.21
SMARCD1-201ENST00000381513 SLC45A2Q9UMX9 530 aa16.37■□□□□ 0.21
SMARCD1-201ENST00000381513 PRSS47A8MTI9 375 aa16.37■□□□□ 0.21
SMARCD1-201ENST00000381513 OPN1LWP04000 364 aa16.37■□□□□ 0.21
SMARCD1-201ENST00000381513 DTYMKP23919 212 aa16.37■□□□□ 0.21
SMARCD1-201ENST00000381513 CST6Q15828 149 aa16.37■□□□□ 0.21
SMARCD1-201ENST00000381513 BATF2Q8N1L9 274 aa16.37■□□□□ 0.21
SMARCD1-201ENST00000381513 PIGLQ9Y2B2 252 aa16.37■□□□□ 0.21
SMARCD1-201ENST00000381513 OBSL1O75147 1896 aa16.37■□□□□ 0.21
SMARCD1-201ENST00000381513 OTOL1A6NHN0 477 aaPredicted RBP16.36■□□□□ 0.21
SMARCD1-201ENST00000381513 CBLN1P23435 193 aa16.36■□□□□ 0.21
SMARCD1-201ENST00000381513 CLRN1P58418 232 aa16.36■□□□□ 0.21
SMARCD1-201ENST00000381513 HLA-DQA1Q5Y7H0 255 aa16.36■□□□□ 0.21
SMARCD1-201ENST00000381513 CORO2AQ92828 525 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms