RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 GGNBP1Q5YKI7 109 aa6.55□□□□□ -1.36
CDKL5-202ENST00000379996 SPAG16Q8N0X2 631 aa6.55□□□□□ -1.36
CDKL5-202ENST00000379996 BOLLQ8N9W6 283 aaKnown RBP6.55□□□□□ -1.36
CDKL5-202ENST00000379996 ZNF2Q9BSG1 426 aaPredicted RBP6.55□□□□□ -1.36
CDKL5-202ENST00000379996 MRPL18Q9H0U6 180 aaKnown RBP6.55□□□□□ -1.36
CDKL5-202ENST00000379996 ESRP2Q9H6T0 727 aaKnown RBP6.55□□□□□ -1.36
CDKL5-202ENST00000379996 C1orf123Q9NWV4 160 aa6.55□□□□□ -1.36
CDKL5-202ENST00000379996 COA4Q9NYJ1 87 aa6.55□□□□□ -1.36
CDKL5-202ENST00000379996 CACFD1Q9UGQ2 172 aa6.55□□□□□ -1.36
CDKL5-202ENST00000379996 POMT1Q9Y6A1 747 aa6.55□□□□□ -1.36
CDKL5-202ENST00000379996 K7EPK0 472 aa6.55□□□□□ -1.36
CDKL5-202ENST00000379996 MBPP02686 304 aaPredicted RBP6.55□□□□□ -1.36
CDKL5-202ENST00000379996 UBE2NP61088 152 aaKnown RBP6.55□□□□□ -1.36
CDKL5-202ENST00000379996 LRRC18Q8N456 261 aa6.55□□□□□ -1.36
CDKL5-202ENST00000379996 FAM71E2Q8N5Q1 922 aa6.55□□□□□ -1.36
CDKL5-202ENST00000379996 CPEB3Q8NE35 698 aaKnown RBP6.55□□□□□ -1.36
CDKL5-202ENST00000379996 SVIPQ8NHG7 77 aa6.55□□□□□ -1.36
CDKL5-202ENST00000379996 MOB3AQ96BX8 217 aa6.55□□□□□ -1.36
CDKL5-202ENST00000379996 MICU1Q9BPX6 476 aa6.55□□□□□ -1.36
CDKL5-202ENST00000379996 HIPK2Q9H2X6 1198 aa6.55□□□□□ -1.36
CDKL5-202ENST00000379996 PLA2G2DQ9UNK4 145 aa6.55□□□□□ -1.36
CDKL5-202ENST00000379996 POLR1DQ9Y2S0 133 aa6.55□□□□□ -1.36
CDKL5-202ENST00000379996 SPTBN2O15020 2390 aa6.55□□□□□ -1.36
CDKL5-202ENST00000379996 MED12Q93074 2177 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 A0A1B0GWJ7 208 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 CLDN14O95500 239 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 IGHV3-9P01782 118 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 SPP1P10451 314 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 RAB1AP62820 205 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 HIKESHIQ53FT3 197 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 SHEQ5VZ18 495 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 MDP1Q86V88 176 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 OR2AE1Q8NHA4 323 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 NPRL2Q8WTW4 380 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 S100PBPQ96BU1 408 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 REEP6Q96HR9 211 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 FAAP24Q9BTP7 215 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 NAA60Q9H7X0 242 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 RHOFQ9HBH0 211 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 PCDHB16Q9NRJ7 776 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 GPR173Q9NS66 373 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 FBXL17Q9UF56 701 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 F5H5K5 113 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 SFTPBP07988 381 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 PET100P0DJ07 73 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 BMP5P22003 454 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 DEFA5Q01523 94 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 ANKRD39Q53RE8 183 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 ZNF774Q6NX45 483 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 PLPPR1Q8TBJ4 325 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 GLYATL2Q8WU03 294 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 FAM96BQ9Y3D0 163 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 CHD8Q9HCK8 2581 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 A0A1B0GW64 132 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 XRCC2O43543 280 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 SPRY1O43609 319 aaPredicted RBP6.54□□□□□ -1.36
CDKL5-202ENST00000379996 LYZL6O75951 148 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 PLATP00750 562 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 MAS1LP35410 378 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 PLP2Q04941 152 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 PIGYQ3MUY2 71 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 COMMD2Q86X83 199 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 NUP37Q8NFH4 326 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 DYRK2Q92630 601 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 NARS2Q96I59 477 aaKnown RBP6.54□□□□□ -1.36
CDKL5-202ENST00000379996 TAF9BQ9HBM6 251 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 PLEK2Q9NYT0 353 aa6.54□□□□□ -1.36
CDKL5-202ENST00000379996 RCL1Q9Y2P8 373 aaKnown RBP6.54□□□□□ -1.36
CDKL5-202ENST00000379996 MTRF1O75570 445 aaKnown RBP6.53□□□□□ -1.36
CDKL5-202ENST00000379996 WNT2P09544 360 aa6.53□□□□□ -1.36
CDKL5-202ENST00000379996 DANCRP0C864 163 aa6.53□□□□□ -1.36
CDKL5-202ENST00000379996 RPL12P30050 165 aaKnown RBP6.53□□□□□ -1.36
CDKL5-202ENST00000379996 UQCRFS1P47985 274 aa6.53□□□□□ -1.36
CDKL5-202ENST00000379996 ARFRP1Q13795 201 aa6.53□□□□□ -1.36
CDKL5-202ENST00000379996 TBC1D28Q2M2D7 210 aa6.53□□□□□ -1.36
CDKL5-202ENST00000379996 TMEM88Q6PEY1 159 aa6.53□□□□□ -1.36
CDKL5-202ENST00000379996 TMEM231Q9H6L2 316 aa6.53□□□□□ -1.36
CDKL5-202ENST00000379996 IGHV1-18A0A0C4DH31 117 aa6.53□□□□□ -1.36
CDKL5-202ENST00000379996 PQLC2LA1A4F0 135 aa6.53□□□□□ -1.36
CDKL5-202ENST00000379996 ZNF705EA8MWA4 302 aaPredicted RBP6.53□□□□□ -1.36
CDKL5-202ENST00000379996 GEMIN2O14893 280 aaKnown RBP6.53□□□□□ -1.36
CDKL5-202ENST00000379996 ANGPTL7O43827 346 aa6.53□□□□□ -1.36
CDKL5-202ENST00000379996 NAPSAO96009 420 aa6.53□□□□□ -1.36
CDKL5-202ENST00000379996 SFTA3P0C7M3 94 aa6.53□□□□□ -1.36
CDKL5-202ENST00000379996 OR8U9P0C7N5 309 aa6.53□□□□□ -1.36
CDKL5-202ENST00000379996 OR5H8P0DN80 308 aa6.53□□□□□ -1.36
CDKL5-202ENST00000379996 SNCAP37840 140 aa6.53□□□□□ -1.36
CDKL5-202ENST00000379996 HOXA1P49639 335 aaPredicted RBP6.53□□□□□ -1.36
CDKL5-202ENST00000379996 RBM11P57052 281 aaKnown RBP6.53□□□□□ -1.36
CDKL5-202ENST00000379996 TMEM33P57088 247 aa6.53□□□□□ -1.36
CDKL5-202ENST00000379996 ZNF92Q03936 586 aa6.53□□□□□ -1.36
CDKL5-202ENST00000379996 CHRFAM7AQ494W8 412 aa6.53□□□□□ -1.36
CDKL5-202ENST00000379996 CALHM1Q8IU99 346 aa6.53□□□□□ -1.36
CDKL5-202ENST00000379996 IQCF2Q8IXL9 164 aa6.53□□□□□ -1.36
CDKL5-202ENST00000379996 OR8U1Q8NH10 309 aa6.53□□□□□ -1.36
CDKL5-202ENST00000379996 APOBEC3DQ96AK3 386 aaPredicted RBP6.53□□□□□ -1.36
CDKL5-202ENST00000379996 GPER1Q99527 375 aa6.53□□□□□ -1.36
CDKL5-202ENST00000379996 KCNJ16Q9NPI9 418 aa6.53□□□□□ -1.36
CDKL5-202ENST00000379996 NECAP2Q9NVZ3 263 aa6.53□□□□□ -1.36
CDKL5-202ENST00000379996 MAP1BP46821 2468 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms