RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 CACNA1CQ13936 2221 aa10.53□□□□□ -0.72
PCDHA9-201ENST00000378122 IGHV1OR21-1A0A087WYE8 117 aa10.53□□□□□ -0.72
PCDHA9-201ENST00000378122 ANXA10Q9UJ72 324 aa10.53□□□□□ -0.72
PCDHA9-201ENST00000378122 ZNF98A6NK75 572 aa10.53□□□□□ -0.72
PCDHA9-201ENST00000378122 RNPS1Q15287 305 aaKnown RBP10.53□□□□□ -0.72
PCDHA9-201ENST00000378122 GPA33Q99795 319 aa10.53□□□□□ -0.72
PCDHA9-201ENST00000378122 ANGPTL4Q9BY76 406 aa10.53□□□□□ -0.72
PCDHA9-201ENST00000378122 GPR27Q9NS67 375 aa10.53□□□□□ -0.72
PCDHA9-201ENST00000378122 TNFSF18Q9UNG2 199 aa10.53□□□□□ -0.72
PCDHA9-201ENST00000378122 TCF21O43680 179 aa10.52□□□□□ -0.72
PCDHA9-201ENST00000378122 LIFP15018 202 aa10.52□□□□□ -0.72
PCDHA9-201ENST00000378122 HLA-GP17693 338 aa10.52□□□□□ -0.72
PCDHA9-201ENST00000378122 ATP6V1FQ16864 119 aa10.52□□□□□ -0.72
PCDHA9-201ENST00000378122 C16orf82Q7Z2V1 217 aa10.52□□□□□ -0.72
PCDHA9-201ENST00000378122 LILRB1Q8NHL6 650 aaPredicted RBP10.52□□□□□ -0.72
PCDHA9-201ENST00000378122 SH2D2AQ9NP31 389 aa10.52□□□□□ -0.72
PCDHA9-201ENST00000378122 SIRT7Q9NRC8 400 aa10.52□□□□□ -0.72
PCDHA9-201ENST00000378122 VAX2Q9UIW0 290 aa10.52□□□□□ -0.72
PCDHA9-201ENST00000378122 APC2O95996 2303 aa10.52□□□□□ -0.72
PCDHA9-201ENST00000378122 USP54Q70EL1 1684 aa10.52□□□□□ -0.72
PCDHA9-201ENST00000378122 ARHGEF17Q96PE2 2063 aaPredicted RBP10.52□□□□□ -0.72
PCDHA9-201ENST00000378122 SPCS3P61009 180 aa10.52□□□□□ -0.73
PCDHA9-201ENST00000378122 ZAR1Q86SH2 424 aa10.52□□□□□ -0.73
PCDHA9-201ENST00000378122 DCTN5Q9BTE1 182 aa10.52□□□□□ -0.73
PCDHA9-201ENST00000378122 LY75O60449 1722 aa10.52□□□□□ -0.73
PCDHA9-201ENST00000378122 OR2M5A3KFT3 312 aa10.52□□□□□ -0.73
PCDHA9-201ENST00000378122 ORM2P19652 201 aa10.52□□□□□ -0.73
PCDHA9-201ENST00000378122 ELOBQ15370 118 aa10.52□□□□□ -0.73
PCDHA9-201ENST00000378122 PIGYQ3MUY2 71 aa10.52□□□□□ -0.73
PCDHA9-201ENST00000378122 SLC25A30Q5SVS4 291 aa10.52□□□□□ -0.73
PCDHA9-201ENST00000378122 ARL6IP6Q8N6S5 226 aa10.52□□□□□ -0.73
PCDHA9-201ENST00000378122 SLC26A10Q8NG04 563 aa10.52□□□□□ -0.73
PCDHA9-201ENST00000378122 OR5AU1Q8NGC0 362 aa10.52□□□□□ -0.73
PCDHA9-201ENST00000378122 ZPLD1Q8TCW7 415 aa10.52□□□□□ -0.73
PCDHA9-201ENST00000378122 VSIG10L2P0DP72 767 aa10.52□□□□□ -0.73
PCDHA9-201ENST00000378122 HTN3P15516 51 aa10.52□□□□□ -0.73
PCDHA9-201ENST00000378122 LBHQ53QV2 105 aaPredicted RBP10.52□□□□□ -0.73
PCDHA9-201ENST00000378122 TM4SF19Q96DZ7 209 aa10.52□□□□□ -0.73
PCDHA9-201ENST00000378122 MFSD2BA6NFX1 497 aa10.52□□□□□ -0.73
PCDHA9-201ENST00000378122 SEMA7AO75326 666 aa10.52□□□□□ -0.73
PCDHA9-201ENST00000378122 LYZP61626 148 aa10.52□□□□□ -0.73
PCDHA9-201ENST00000378122 ZNF260Q3ZCT1 412 aa10.52□□□□□ -0.73
PCDHA9-201ENST00000378122 REPIN1Q9BWE0 567 aaKnown RBP10.52□□□□□ -0.73
PCDHA9-201ENST00000378122 KLHDC2Q9Y2U9 406 aa10.52□□□□□ -0.73
PCDHA9-201ENST00000378122 ERVH48-1M5A8F1 160 aa10.51□□□□□ -0.73
PCDHA9-201ENST00000378122 DCAF12L2Q5VW00 463 aa10.51□□□□□ -0.73
PCDHA9-201ENST00000378122 LYZL2Q7Z4W2 148 aa10.51□□□□□ -0.73
PCDHA9-201ENST00000378122 RP1P56715 2156 aa10.51□□□□□ -0.73
PCDHA9-201ENST00000378122 EPOPA6NHQ4 379 aa10.51□□□□□ -0.73
PCDHA9-201ENST00000378122 CSN3P07498 182 aa10.51□□□□□ -0.73
PCDHA9-201ENST00000378122 DRD3P35462 400 aa10.51□□□□□ -0.73
PCDHA9-201ENST00000378122 ZNF345Q14585 488 aa10.51□□□□□ -0.73
PCDHA9-201ENST00000378122 OR10G8Q8NGN5 311 aa10.51□□□□□ -0.73
PCDHA9-201ENST00000378122 OR6X1Q8NH79 312 aa10.51□□□□□ -0.73
PCDHA9-201ENST00000378122 RHOVQ96L33 236 aa10.51□□□□□ -0.73
PCDHA9-201ENST00000378122 IGHV5-10-1A0A0J9YXX1 117 aa10.51□□□□□ -0.73
PCDHA9-201ENST00000378122 NKX2-6A6NCS4 301 aa10.51□□□□□ -0.73
PCDHA9-201ENST00000378122 RAB7AP51149 207 aa10.51□□□□□ -0.73
PCDHA9-201ENST00000378122 IFITM2Q01629 132 aa10.51□□□□□ -0.73
PCDHA9-201ENST00000378122 VN1R17PQ8TDU5 208 aa10.51□□□□□ -0.73
PCDHA9-201ENST00000378122 MAP1LC3CQ9BXW4 147 aa10.51□□□□□ -0.73
PCDHA9-201ENST00000378122 TRIP12Q14669 1992 aaPredicted RBP10.51□□□□□ -0.73
PCDHA9-201ENST00000378122 PNLIPP16233 465 aa10.51□□□□□ -0.73
PCDHA9-201ENST00000378122 PSG6Q00889 435 aa10.51□□□□□ -0.73
PCDHA9-201ENST00000378122 OR4A4PQ8NGN8 299 aa10.51□□□□□ -0.73
PCDHA9-201ENST00000378122 R3HDM4Q96D70 268 aa10.51□□□□□ -0.73
PCDHA9-201ENST00000378122 RTN4RQ9BZR6 473 aa10.51□□□□□ -0.73
PCDHA9-201ENST00000378122 CXXC4Q9H2H0 198 aa10.51□□□□□ -0.73
PCDHA9-201ENST00000378122 CCL28Q9NRJ3 127 aa10.51□□□□□ -0.73
PCDHA9-201ENST00000378122 PAM16Q9Y3D7 125 aa10.51□□□□□ -0.73
PCDHA9-201ENST00000378122 SIRT4Q9Y6E7 314 aaPredicted RBP10.51□□□□□ -0.73
PCDHA9-201ENST00000378122 MYO16Q9Y6X6 1858 aa10.51□□□□□ -0.73
PCDHA9-201ENST00000378122 ZNF207O43670 478 aaKnown RBP10.51□□□□□ -0.73
PCDHA9-201ENST00000378122 MUC1P15941 1255 aaPredicted RBP10.51□□□□□ -0.73
PCDHA9-201ENST00000378122 FAM209BQ5JX69 171 aa10.51□□□□□ -0.73
PCDHA9-201ENST00000378122 TRAT1Q6PIZ9 186 aa10.51□□□□□ -0.73
PCDHA9-201ENST00000378122 RASL11BQ9BPW5 248 aa10.51□□□□□ -0.73
PCDHA9-201ENST00000378122 SLC52A3Q9NQ40 469 aa10.51□□□□□ -0.73
PCDHA9-201ENST00000378122 OR1K1Q8NGR3 316 aa10.51□□□□□ -0.73
PCDHA9-201ENST00000378122 RPS4Y1P22090 263 aaKnown RBP10.5□□□□□ -0.73
PCDHA9-201ENST00000378122 UBE2V2Q15819 145 aa10.5□□□□□ -0.73
PCDHA9-201ENST00000378122 A0A1W2PPV9 198 aa10.5□□□□□ -0.73
PCDHA9-201ENST00000378122 GPR6P46095 362 aaPredicted RBP10.5□□□□□ -0.73
PCDHA9-201ENST00000378122 NSUN5P2Q63ZY6 315 aa10.5□□□□□ -0.73
PCDHA9-201ENST00000378122 RNF2Q99496 336 aa10.5□□□□□ -0.73
PCDHA9-201ENST00000378122 HDHD3Q9BSH5 251 aaPredicted RBP10.5□□□□□ -0.73
PCDHA9-201ENST00000378122 LIPT2A6NK58 231 aa10.5□□□□□ -0.73
PCDHA9-201ENST00000378122 K7ESF4 209 aa10.5□□□□□ -0.73
PCDHA9-201ENST00000378122 SYNGR2O43760 224 aa10.5□□□□□ -0.73
PCDHA9-201ENST00000378122 ZNF253O75346 499 aa10.5□□□□□ -0.73
PCDHA9-201ENST00000378122 BGLAPP02818 100 aa10.5□□□□□ -0.73
PCDHA9-201ENST00000378122 MDKP21741 143 aaPredicted RBP10.5□□□□□ -0.73
PCDHA9-201ENST00000378122 G6PCP35575 357 aa10.5□□□□□ -0.73
PCDHA9-201ENST00000378122 ISXQ2M1V0 245 aa10.5□□□□□ -0.73
PCDHA9-201ENST00000378122 ZNF831Q5JPB2 1677 aa10.5□□□□□ -0.73
PCDHA9-201ENST00000378122 LINC01387J3KSC0 135 aa10.5□□□□□ -0.73
PCDHA9-201ENST00000378122 SRSF10O75494 262 aaKnown RBP10.5□□□□□ -0.73
PCDHA9-201ENST00000378122 HOXC4P09017 264 aaPredicted RBP10.5□□□□□ -0.73
PCDHA9-201ENST00000378122 CD82P27701 267 aa10.5□□□□□ -0.73
PCDHA9-201ENST00000378122 PMELP40967 661 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms