RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 OR10X1Q8NGY0 326 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 OR4K15Q8NH41 348 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 ARL11Q969Q4 196 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 UQCC2Q9BRT2 126 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 PRSS22Q9GZN4 317 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 CST11Q9H112 138 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 MMP28Q9H239 520 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 NCOR1P1Q9H4R4 102 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 ZNF702PQ9H963 129 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 BLOC1S6Q9UL45 172 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 PEX16Q9Y5Y5 336 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 A0A087X0M5 115 aa9.3□□□□□ -0.92
SMARCE1-203ENST00000377808 IGHV3-43A0A0B4J1X8 118 aa9.3□□□□□ -0.92
SMARCE1-203ENST00000377808 A0A1B0GX30 115 aa9.3□□□□□ -0.92
SMARCE1-203ENST00000377808 UBE2QL1A1L167 161 aa9.3□□□□□ -0.92
SMARCE1-203ENST00000377808 J3QR06 171 aa9.3□□□□□ -0.92
SMARCE1-203ENST00000377808 SDCBPO00560 298 aaPredicted RBP9.3□□□□□ -0.92
SMARCE1-203ENST00000377808 IGHV3-43DP0DP04 118 aa9.3□□□□□ -0.92
SMARCE1-203ENST00000377808 CRHBPP24387 322 aa9.3□□□□□ -0.92
SMARCE1-203ENST00000377808 EFNB2P52799 333 aa9.3□□□□□ -0.92
SMARCE1-203ENST00000377808 C11orf88Q6PI97 169 aa9.3□□□□□ -0.92
SMARCE1-203ENST00000377808 LRRTM1Q86UE6 522 aa9.3□□□□□ -0.92
SMARCE1-203ENST00000377808 TMEM104Q8NE00 496 aa9.3□□□□□ -0.92
SMARCE1-203ENST00000377808 MRPS24Q96EL2 167 aaKnown RBP9.3□□□□□ -0.92
SMARCE1-203ENST00000377808 AKR1E2Q96JD6 320 aa9.3□□□□□ -0.92
SMARCE1-203ENST00000377808 DUSP21Q9H596 190 aa9.3□□□□□ -0.92
SMARCE1-203ENST00000377808 PSG11Q9UQ72 335 aa9.3□□□□□ -0.92
SMARCE1-203ENST00000377808 NPIPB11E5RHQ5 1161 aa9.29□□□□□ -0.92
SMARCE1-203ENST00000377808 CSF1P09603 554 aa9.29□□□□□ -0.92
SMARCE1-203ENST00000377808 UBBP0CG47 229 aa9.29□□□□□ -0.92
SMARCE1-203ENST00000377808 CGB3P0DN86 165 aa9.29□□□□□ -0.92
SMARCE1-203ENST00000377808 CGB7P0DN87 165 aa9.29□□□□□ -0.92
SMARCE1-203ENST00000377808 SRMP19623 302 aa9.29□□□□□ -0.92
SMARCE1-203ENST00000377808 GZMHP20718 246 aa9.29□□□□□ -0.92
SMARCE1-203ENST00000377808 VDAC2P45880 294 aaPredicted RBP9.29□□□□□ -0.92
SMARCE1-203ENST00000377808 GP2P55259 537 aaKnown RBP9.29□□□□□ -0.92
SMARCE1-203ENST00000377808 BLCAPP62952 87 aa9.29□□□□□ -0.92
SMARCE1-203ENST00000377808 PAX5Q02548 391 aa9.29□□□□□ -0.92
SMARCE1-203ENST00000377808 MLLT11Q13015 90 aaPredicted RBP9.29□□□□□ -0.92
SMARCE1-203ENST00000377808 MADCAM1Q13477 382 aa9.29□□□□□ -0.92
SMARCE1-203ENST00000377808 HES1Q14469 280 aa9.29□□□□□ -0.92
SMARCE1-203ENST00000377808 C2orf68Q2NKX9 166 aa9.29□□□□□ -0.92
SMARCE1-203ENST00000377808 TMEM95Q3KNT9 176 aa9.29□□□□□ -0.92
SMARCE1-203ENST00000377808 C9orf152Q5JTZ5 239 aa9.29□□□□□ -0.92
SMARCE1-203ENST00000377808 C6orf183Q5T699 404 aa9.29□□□□□ -0.92
SMARCE1-203ENST00000377808 SYT6Q5T7P8 510 aaPredicted RBP9.29□□□□□ -0.92
SMARCE1-203ENST00000377808 OR10K2Q6IF99 312 aa9.29□□□□□ -0.92
SMARCE1-203ENST00000377808 UNQ9370/PRO34162Q6UXP9 181 aa9.29□□□□□ -0.92
SMARCE1-203ENST00000377808 ZNF497Q6ZNH5 498 aa9.29□□□□□ -0.92
SMARCE1-203ENST00000377808 PRSS48Q7RTY5 328 aa9.29□□□□□ -0.92
SMARCE1-203ENST00000377808 FAM110DQ8TAY7 271 aaPredicted RBP9.29□□□□□ -0.92
SMARCE1-203ENST00000377808 Q96M66 194 aa9.29□□□□□ -0.92
SMARCE1-203ENST00000377808 SLC25A33Q9BSK2 321 aa9.29□□□□□ -0.92
SMARCE1-203ENST00000377808 KCNK15Q9H427 330 aa9.29□□□□□ -0.92
SMARCE1-203ENST00000377808 PLGRKTQ9HBL7 147 aa9.29□□□□□ -0.92
SMARCE1-203ENST00000377808 RCC2Q9P258 522 aaKnown RBP9.29□□□□□ -0.92
SMARCE1-203ENST00000377808 GHRLQ9UBU3 117 aa9.29□□□□□ -0.92
SMARCE1-203ENST00000377808 CMYA5Q8N3K9 4069 aa9.28□□□□□ -0.92
SMARCE1-203ENST00000377808 SPINT2O43291 252 aa9.28□□□□□ -0.92
SMARCE1-203ENST00000377808 PDCD6O75340 191 aa9.28□□□□□ -0.92
SMARCE1-203ENST00000377808 TSPAN15O95858 294 aa9.28□□□□□ -0.92
SMARCE1-203ENST00000377808 MT-ND4P03905 459 aa9.28□□□□□ -0.92
SMARCE1-203ENST00000377808 UCHL1P09936 223 aa9.28□□□□□ -0.92
SMARCE1-203ENST00000377808 FUT3P21217 361 aa9.28□□□□□ -0.92
SMARCE1-203ENST00000377808 CALRP27797 417 aaKnown RBP9.28□□□□□ -0.92
SMARCE1-203ENST00000377808 HTR2CP28335 458 aa9.28□□□□□ -0.92
SMARCE1-203ENST00000377808 P2RY14Q15391 338 aa9.28□□□□□ -0.92
SMARCE1-203ENST00000377808 TRAM1Q15629 374 aa9.28□□□□□ -0.92
SMARCE1-203ENST00000377808 C16orf82Q7Z2V1 217 aa9.28□□□□□ -0.92
SMARCE1-203ENST00000377808 LYG1Q8N1E2 194 aa9.28□□□□□ -0.92
SMARCE1-203ENST00000377808 OR10A7Q8NGE5 316 aa9.28□□□□□ -0.92
SMARCE1-203ENST00000377808 OR10V1Q8NGI7 309 aa9.28□□□□□ -0.92
SMARCE1-203ENST00000377808 OR56B4Q8NH76 319 aa9.28□□□□□ -0.92
SMARCE1-203ENST00000377808 PHYHIPQ92561 330 aa9.28□□□□□ -0.92
SMARCE1-203ENST00000377808 NEDD4LQ96PU5 975 aa9.28□□□□□ -0.92
SMARCE1-203ENST00000377808 MGLLQ99685 303 aa9.28□□□□□ -0.92
SMARCE1-203ENST00000377808 TMEM59Q9BXS4 323 aa9.28□□□□□ -0.92
SMARCE1-203ENST00000377808 MMP27Q9H306 513 aa9.28□□□□□ -0.92
SMARCE1-203ENST00000377808 RAB9BQ9NP90 201 aa9.28□□□□□ -0.92
SMARCE1-203ENST00000377808 GNG12Q9UBI6 72 aa9.28□□□□□ -0.92
SMARCE1-203ENST00000377808 RAB26Q9ULW5 256 aa9.28□□□□□ -0.92
SMARCE1-203ENST00000377808 FAM90A10PA6NDY2 464 aa9.27□□□□□ -0.93
SMARCE1-203ENST00000377808 FAM90A18PA6NE21 464 aa9.27□□□□□ -0.93
SMARCE1-203ENST00000377808 FAM90A16PA6NEW6 464 aa9.27□□□□□ -0.93
SMARCE1-203ENST00000377808 FAM90A20PA6NIJ5 464 aa9.27□□□□□ -0.93
SMARCE1-203ENST00000377808 FAM90A7PA6NKC0 464 aa9.27□□□□□ -0.93
SMARCE1-203ENST00000377808 SH2D7A6NKC9 451 aaPredicted RBP9.27□□□□□ -0.93
SMARCE1-203ENST00000377808 FAM90A22PA8MWA6 464 aa9.27□□□□□ -0.93
SMARCE1-203ENST00000377808 FAM90A12PA8MX19 464 aa9.27□□□□□ -0.93
SMARCE1-203ENST00000377808 FAM90A5PA8MXJ8 464 aa9.27□□□□□ -0.93
SMARCE1-203ENST00000377808 FAM90A23PA8MXZ1 464 aa9.27□□□□□ -0.93
SMARCE1-203ENST00000377808 OOSP1A8MZH6 123 aa9.27□□□□□ -0.93
SMARCE1-203ENST00000377808 C12orf77C9JDV5 145 aa9.27□□□□□ -0.93
SMARCE1-203ENST00000377808 LY6LH3BQJ8 138 aa9.27□□□□□ -0.93
SMARCE1-203ENST00000377808 C15orf65H3BRN8 121 aa9.27□□□□□ -0.93
SMARCE1-203ENST00000377808 HSD17B6O14756 317 aa9.27□□□□□ -0.93
SMARCE1-203ENST00000377808 ORC5O43913 435 aa9.27□□□□□ -0.93
SMARCE1-203ENST00000377808 FBXO24O75426 580 aa9.27□□□□□ -0.93
SMARCE1-203ENST00000377808 ARL6IP5O75915 188 aa9.27□□□□□ -0.93
SMARCE1-203ENST00000377808 OR2F2O95006 317 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms