RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 ERVFRD-1P60508 538 aa11.3□□□□□ -0.6
ACTN1-202ENST00000376839 SRYQ05066 204 aa11.3□□□□□ -0.6
ACTN1-202ENST00000376839 BAXQ07812 192 aa11.3□□□□□ -0.6
ACTN1-202ENST00000376839 SRSF7Q16629 238 aaKnown RBP eCLIP11.3□□□□□ -0.63e-14■■■■□ 24.7
ACTN1-202ENST00000376839 ZNF506Q5JVG8 444 aa11.3□□□□□ -0.6
ACTN1-202ENST00000376839 ZDHHC23Q8IYP9 409 aa11.3□□□□□ -0.6
ACTN1-202ENST00000376839 CMTM1Q8IZ96 169 aa11.3□□□□□ -0.6
ACTN1-202ENST00000376839 OR5D13Q8NGL4 314 aa11.3□□□□□ -0.6
ACTN1-202ENST00000376839 ATP5SQ99766 215 aa11.3□□□□□ -0.6
ACTN1-202ENST00000376839 ZNF552Q9H707 407 aaPredicted RBP11.3□□□□□ -0.6
ACTN1-202ENST00000376839 MUC3AQ02505 3323 aa11.29□□□□□ -0.6
ACTN1-202ENST00000376839 TRBV23-1A0A0A0MS06 115 aa11.29□□□□□ -0.6
ACTN1-202ENST00000376839 DUXBA0A1W2PPF3 345 aa11.29□□□□□ -0.6
ACTN1-202ENST00000376839 H0Y980 276 aa11.29□□□□□ -0.6
ACTN1-202ENST00000376839 MRPL33O75394 65 aaKnown RBP11.29□□□□□ -0.6
ACTN1-202ENST00000376839 NGFP01138 241 aa11.29□□□□□ -0.6
ACTN1-202ENST00000376839 TMEM267Q0VDI3 215 aaPredicted RBP11.29□□□□□ -0.6
ACTN1-202ENST00000376839 ELOBQ15370 118 aa11.29□□□□□ -0.6
ACTN1-202ENST00000376839 CEACAM21Q3KPI0 293 aa11.29□□□□□ -0.6
ACTN1-202ENST00000376839 MRPL21Q7Z2W9 205 aaKnown RBP11.29□□□□□ -0.6
ACTN1-202ENST00000376839 OR51H1Q8NH63 302 aa11.29□□□□□ -0.6
ACTN1-202ENST00000376839 UNKLQ9H9P5 680 aaKnown RBP11.29□□□□□ -0.6
ACTN1-202ENST00000376839 PCSK5Q92824 1860 aa11.29□□□□□ -0.6
ACTN1-202ENST00000376839 KIR2DS1A0A191URI9 304 aa11.29□□□□□ -0.6
ACTN1-202ENST00000376839 HSPB1P04792 205 aaKnown RBP11.29□□□□□ -0.6
ACTN1-202ENST00000376839 KIR2DS4P43632 304 aa11.29□□□□□ -0.6
ACTN1-202ENST00000376839 KIR2DS1Q14954 304 aa11.29□□□□□ -0.6
ACTN1-202ENST00000376839 SNIP1Q8TAD8 396 aaKnown RBP11.29□□□□□ -0.6
ACTN1-202ENST00000376839 MRPL30Q8TCC3 161 aaKnown RBP11.29□□□□□ -0.6
ACTN1-202ENST00000376839 GPR146Q96CH1 333 aa11.29□□□□□ -0.6
ACTN1-202ENST00000376839 POM121Q96HA1 1249 aa11.29□□□□□ -0.6
ACTN1-202ENST00000376839 TMPRSS5Q9H3S3 457 aa11.29□□□□□ -0.6
ACTN1-202ENST00000376839 DOCK10Q96BY6 2186 aa11.28□□□□□ -0.6
ACTN1-202ENST00000376839 TGIF2-C20orf24A0A0A6YYL0 155 aa11.28□□□□□ -0.6
ACTN1-202ENST00000376839 TRAPPC2LH3BP13 241 aa11.28□□□□□ -0.6
ACTN1-202ENST00000376839 HS3ST1O14792 307 aa11.28□□□□□ -0.6
ACTN1-202ENST00000376839 LILRA1O75019 489 aa11.28□□□□□ -0.6
ACTN1-202ENST00000376839 CEACAM1P13688 526 aa11.28□□□□□ -0.6
ACTN1-202ENST00000376839 TAS2R30P59541 319 aa11.28□□□□□ -0.6
ACTN1-202ENST00000376839 RPL23AP62750 156 aaKnown RBP11.28□□□□□ -0.6
ACTN1-202ENST00000376839 IGFBP7Q16270 282 aa11.28□□□□□ -0.6
ACTN1-202ENST00000376839 MPV17LQ2QL34 196 aa11.28□□□□□ -0.6
ACTN1-202ENST00000376839 THNSL2Q86YJ6 484 aa11.28□□□□□ -0.6
ACTN1-202ENST00000376839 RDH5Q92781 318 aa11.28□□□□□ -0.6
ACTN1-202ENST00000376839 TNRC6BQ9UPQ9 1833 aaKnown RBP11.28□□□□□ -0.6
ACTN1-202ENST00000376839 IGHV2-70P01814 119 aa11.28□□□□□ -0.6
ACTN1-202ENST00000376839 CELA3AP09093 270 aa11.28□□□□□ -0.6
ACTN1-202ENST00000376839 MMP9P14780 707 aa11.28□□□□□ -0.6
ACTN1-202ENST00000376839 HOXA5P20719 270 aa11.28□□□□□ -0.6
ACTN1-202ENST00000376839 F2RP25116 425 aa11.28□□□□□ -0.6
ACTN1-202ENST00000376839 IL24Q13007 206 aa11.28□□□□□ -0.6
ACTN1-202ENST00000376839 ZNF674Q2M3X9 581 aa11.28□□□□□ -0.6
ACTN1-202ENST00000376839 SPINK14Q6IE38 97 aa11.28□□□□□ -0.6
ACTN1-202ENST00000376839 Q6ZRM9 215 aa11.28□□□□□ -0.6
ACTN1-202ENST00000376839 SAXO1Q8IYX7 474 aa11.28□□□□□ -0.6
ACTN1-202ENST00000376839 C17orf78Q8N4C9 275 aa11.28□□□□□ -0.6
ACTN1-202ENST00000376839 MAFAQ8NHW3 353 aaPredicted RBP11.28□□□□□ -0.6
ACTN1-202ENST00000376839 TMEM45BQ96B21 275 aa11.28□□□□□ -0.6
ACTN1-202ENST00000376839 DOCK7Q96N67 2140 aa11.28□□□□□ -0.6
ACTN1-202ENST00000376839 GGACTQ9BVM4 153 aa11.28□□□□□ -0.6
ACTN1-202ENST00000376839 KIAA1324LA8MWY0 1029 aaPredicted RBP11.27□□□□□ -0.6
ACTN1-202ENST00000376839 PSG2P11465 335 aa11.27□□□□□ -0.6
ACTN1-202ENST00000376839 S100PP25815 95 aa11.27□□□□□ -0.6
ACTN1-202ENST00000376839 NDUFA6P56556 154 aa11.27□□□□□ -0.6
ACTN1-202ENST00000376839 TRA2AQ13595 282 aaKnown RBP eCLIP11.27□□□□□ -0.6
ACTN1-202ENST00000376839 TUSC5Q8IXB3 177 aa11.27□□□□□ -0.6
ACTN1-202ENST00000376839 MKXQ8IYA7 352 aa11.27□□□□□ -0.6
ACTN1-202ENST00000376839 TVP23CQ96ET8 276 aa11.27□□□□□ -0.6
ACTN1-202ENST00000376839 NIPSNAP3BQ9BS92 247 aa11.27□□□□□ -0.6
ACTN1-202ENST00000376839 RSG1Q9BU20 258 aa11.27□□□□□ -0.6
ACTN1-202ENST00000376839 TCFL5Q9UL49 500 aa11.27□□□□□ -0.6
ACTN1-202ENST00000376839 A0A087WWC5 75 aa11.27□□□□□ -0.61
ACTN1-202ENST00000376839 RD3LP0DJH9 198 aa11.27□□□□□ -0.61
ACTN1-202ENST00000376839 TLE4Q04727 773 aa11.27□□□□□ -0.61
ACTN1-202ENST00000376839 ZNF324BQ6AW86 544 aaPredicted RBP11.27□□□□□ -0.61
ACTN1-202ENST00000376839 BCL2L14Q9BZR8 327 aa11.27□□□□□ -0.61
ACTN1-202ENST00000376839 TOLLIPQ9H0E2 274 aa11.27□□□□□ -0.61
ACTN1-202ENST00000376839 DOK5Q9P104 306 aa11.27□□□□□ -0.61
ACTN1-202ENST00000376839 GNG13Q9P2W3 67 aa11.27□□□□□ -0.61
ACTN1-202ENST00000376839 FAM186AA6NE01 2351 aa11.27□□□□□ -0.61
ACTN1-202ENST00000376839 TRAV39A0A0B4J263 110 aa11.27□□□□□ -0.61
ACTN1-202ENST00000376839 TRAV24A0A0B4J272 114 aa11.27□□□□□ -0.61
ACTN1-202ENST00000376839 ARGFXA6NJG6 315 aa11.27□□□□□ -0.61
ACTN1-202ENST00000376839 CYB561P49447 251 aa11.27□□□□□ -0.61
ACTN1-202ENST00000376839 NRN1LQ496H8 165 aa11.27□□□□□ -0.61
ACTN1-202ENST00000376839 CDPF1Q6NVV7 123 aa11.27□□□□□ -0.61
ACTN1-202ENST00000376839 STX12Q86Y82 276 aa11.27□□□□□ -0.61
ACTN1-202ENST00000376839 IL22RA2Q969J5 263 aa11.27□□□□□ -0.61
ACTN1-202ENST00000376839 RBMXL1Q96E39 390 aaKnown RBP11.27□□□□□ -0.61
ACTN1-202ENST00000376839 VSIRQ9H7M9 311 aa11.27□□□□□ -0.61
ACTN1-202ENST00000376839 ERRFI1Q9UJM3 462 aaPredicted RBP11.27□□□□□ -0.61
ACTN1-202ENST00000376839 TNRC6AQ8NDV7 1962 aaKnown RBP11.26□□□□□ -0.61
ACTN1-202ENST00000376839 IGKV3D-15A0A087WSY6 115 aa11.26□□□□□ -0.61
ACTN1-202ENST00000376839 LOC102723971A0A1B0GUV8 181 aa11.26□□□□□ -0.61
ACTN1-202ENST00000376839 CTXN2P0C2S0 81 aa11.26□□□□□ -0.61
ACTN1-202ENST00000376839 JMJD7P0C870 316 aa11.26□□□□□ -0.61
ACTN1-202ENST00000376839 SLC25A24Q6NUK1 477 aa11.26□□□□□ -0.61
ACTN1-202ENST00000376839 SPNS3Q6ZMD2 512 aa11.26□□□□□ -0.61
ACTN1-202ENST00000376839 OR51B6Q9H340 312 aa11.26□□□□□ -0.61
ACTN1-202ENST00000376839 OR1A1Q9P1Q5 309 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms