RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 VAX1Q5SQQ9 334 aa11.84□□□□□ -0.51
C9orf47-203ENST00000375851 ANGPTL6Q8NI99 470 aa11.84□□□□□ -0.51
C9orf47-203ENST00000375851 VSTM2AQ8TAG5 236 aa11.84□□□□□ -0.51
C9orf47-203ENST00000375851 OR1A1Q9P1Q5 309 aa11.84□□□□□ -0.51
C9orf47-203ENST00000375851 PRSS50Q9UI38 385 aa11.84□□□□□ -0.51
C9orf47-203ENST00000375851 MMP24Q9Y5R2 645 aa11.84□□□□□ -0.51
C9orf47-203ENST00000375851 DOCK6Q96HP0 2047 aa11.84□□□□□ -0.51
C9orf47-203ENST00000375851 IGKV3D-11A0A0A0MRZ8 115 aa11.84□□□□□ -0.51
C9orf47-203ENST00000375851 ZDHHC16Q969W1 377 aa11.84□□□□□ -0.51
C9orf47-203ENST00000375851 ZNF665Q9H7R5 613 aa11.84□□□□□ -0.51
C9orf47-203ENST00000375851 FAM206AQ9NX38 181 aa11.84□□□□□ -0.51
C9orf47-203ENST00000375851 ESPL1Q14674 2120 aa11.84□□□□□ -0.51
C9orf47-203ENST00000375851 SNRNP200O75643 2136 aaKnown RBP11.84□□□□□ -0.51
C9orf47-203ENST00000375851 B3GALNT1O75752 331 aa11.84□□□□□ -0.51
C9orf47-203ENST00000375851 CEACAM3P40198 252 aa11.84□□□□□ -0.51
C9orf47-203ENST00000375851 ACSM6Q6P461 480 aa11.84□□□□□ -0.51
C9orf47-203ENST00000375851 PPP1R32Q7Z5V6 425 aa11.84□□□□□ -0.51
C9orf47-203ENST00000375851 LINC00596Q86U02 117 aa11.84□□□□□ -0.51
C9orf47-203ENST00000375851 DTD1Q8TEA8 209 aa11.84□□□□□ -0.51
C9orf47-203ENST00000375851 ZDHHC11Q9H8X9 412 aa11.84□□□□□ -0.51
C9orf47-203ENST00000375851 A0A1W2PRD5 423 aa11.83□□□□□ -0.52
C9orf47-203ENST00000375851 A0A1W2PRF3 423 aa11.83□□□□□ -0.52
C9orf47-203ENST00000375851 A0A1W2PRM7 423 aa11.83□□□□□ -0.52
C9orf47-203ENST00000375851 RGS13O14921 159 aa11.83□□□□□ -0.52
C9orf47-203ENST00000375851 ETFRF1Q6IPR1 90 aa11.83□□□□□ -0.52
C9orf47-203ENST00000375851 CHRDL1Q9BU40 450 aa11.83□□□□□ -0.52
C9orf47-203ENST00000375851 SLC45A2Q9UMX9 530 aa11.83□□□□□ -0.52
C9orf47-203ENST00000375851 SEMA7AO75326 666 aa11.83□□□□□ -0.52
C9orf47-203ENST00000375851 RHOBP62745 196 aa11.83□□□□□ -0.52
C9orf47-203ENST00000375851 ZNF154Q13106 437 aa11.83□□□□□ -0.52
C9orf47-203ENST00000375851 GABRA6Q16445 453 aa11.83□□□□□ -0.52
C9orf47-203ENST00000375851 SEBOXQ9HB31 216 aaPredicted RBP11.83□□□□□ -0.52
C9orf47-203ENST00000375851 MED12Q93074 2177 aa11.83□□□□□ -0.52
C9orf47-203ENST00000375851 LNP1A1A4G5 178 aa11.83□□□□□ -0.52
C9orf47-203ENST00000375851 AHRRA9YTQ3 701 aa11.83□□□□□ -0.52
C9orf47-203ENST00000375851 ZNF737O75373 536 aa11.83□□□□□ -0.52
C9orf47-203ENST00000375851 FGF8P55075 233 aaPredicted RBP11.83□□□□□ -0.52
C9orf47-203ENST00000375851 ZNF705AQ6ZN79 300 aaPredicted RBP11.83□□□□□ -0.52
C9orf47-203ENST00000375851 Q9N2K0 584 aa11.83□□□□□ -0.52
C9orf47-203ENST00000375851 PATJQ8NI35 1801 aa11.83□□□□□ -0.52
C9orf47-203ENST00000375851 PDCD11Q14690 1871 aaKnown RBP11.83□□□□□ -0.52
C9orf47-203ENST00000375851 PRR33A8MZF0 331 aa11.83□□□□□ -0.52
C9orf47-203ENST00000375851 FGF12P61328 243 aa11.83□□□□□ -0.52
C9orf47-203ENST00000375851 TMEM241Q24JQ0 296 aa11.83□□□□□ -0.52
C9orf47-203ENST00000375851 XKRY2A2RUG3 117 aa11.82□□□□□ -0.52
C9orf47-203ENST00000375851 CDRT15L2A8MXV6 281 aa11.82□□□□□ -0.52
C9orf47-203ENST00000375851 TMEM229AB2RXF0 380 aa11.82□□□□□ -0.52
C9orf47-203ENST00000375851 CLDN34H7C241 214 aa11.82□□□□□ -0.52
C9orf47-203ENST00000375851 ATP1A1-AS1Q5TC04 95 aa11.82□□□□□ -0.52
C9orf47-203ENST00000375851 TPRX1Q8N7U7 411 aa11.82□□□□□ -0.52
C9orf47-203ENST00000375851 PRR7Q8TB68 274 aa11.82□□□□□ -0.52
C9orf47-203ENST00000375851 IGHV3OR15-7A0A075B7D8 119 aa11.82□□□□□ -0.52
C9orf47-203ENST00000375851 NPIPB13A6NJU9 1138 aa11.82□□□□□ -0.52
C9orf47-203ENST00000375851 NPIPB4C9JG80 1138 aa11.82□□□□□ -0.52
C9orf47-203ENST00000375851 TOX4O94842 621 aa11.82□□□□□ -0.52
C9orf47-203ENST00000375851 Q56UQ5 140 aa11.82□□□□□ -0.52
C9orf47-203ENST00000375851 FNDC7Q5VTL7 733 aa11.82□□□□□ -0.52
C9orf47-203ENST00000375851 ZBTB34Q8NCN2 500 aa11.82□□□□□ -0.52
C9orf47-203ENST00000375851 ATP5SQ99766 215 aa11.82□□□□□ -0.52
C9orf47-203ENST00000375851 SRXN1Q9BYN0 137 aa11.82□□□□□ -0.52
C9orf47-203ENST00000375851 OPN3Q9H1Y3 402 aaPredicted RBP11.82□□□□□ -0.52
C9orf47-203ENST00000375851 AMMECR1Q9Y4X0 333 aaPredicted RBP11.82□□□□□ -0.52
C9orf47-203ENST00000375851 FAM157AC9JC47 383 aa11.82□□□□□ -0.52
C9orf47-203ENST00000375851 PPP1CCP36873 323 aaKnown RBP11.82□□□□□ -0.52
C9orf47-203ENST00000375851 CCL8P80075 99 aa11.82□□□□□ -0.52
C9orf47-203ENST00000375851 SNAI3Q3KNW1 292 aa11.82□□□□□ -0.52
C9orf47-203ENST00000375851 HSD17B10Q99714 261 aaKnown RBP11.82□□□□□ -0.52
C9orf47-203ENST00000375851 G6PC2Q9NQR9 355 aa11.82□□□□□ -0.52
C9orf47-203ENST00000375851 ZNF236Q9UL36 1845 aa11.82□□□□□ -0.52
C9orf47-203ENST00000375851 POLEQ07864 2286 aa11.82□□□□□ -0.52
C9orf47-203ENST00000375851 CACNA1HO95180 2353 aa11.82□□□□□ -0.52
C9orf47-203ENST00000375851 DBX1A6NMT0 343 aa11.81□□□□□ -0.52
C9orf47-203ENST00000375851 RECKO95980 971 aa11.81□□□□□ -0.52
C9orf47-203ENST00000375851 PRF1P14222 555 aa11.81□□□□□ -0.52
C9orf47-203ENST00000375851 NQO2P16083 231 aa11.81□□□□□ -0.52
C9orf47-203ENST00000375851 EWSR1Q01844 656 aaKnown RBP eCLIP11.81□□□□□ -0.52
C9orf47-203ENST00000375851 DCAF12L2Q5VW00 463 aa11.81□□□□□ -0.52
C9orf47-203ENST00000375851 CHD5Q8TDI0 1954 aa11.81□□□□□ -0.52
C9orf47-203ENST00000375851 MDC1Q14676 2089 aaKnown RBP11.81□□□□□ -0.52
C9orf47-203ENST00000375851 PSG2P11465 335 aa11.81□□□□□ -0.52
C9orf47-203ENST00000375851 HLA-GP17693 338 aa11.81□□□□□ -0.52
C9orf47-203ENST00000375851 PRDX2P32119 198 aa11.81□□□□□ -0.52
C9orf47-203ENST00000375851 C1orf185Q5T7R7 199 aa11.81□□□□□ -0.52
C9orf47-203ENST00000375851 FDX2Q6P4F2 183 aa11.81□□□□□ -0.52
C9orf47-203ENST00000375851 CHAC2Q8WUX2 184 aa11.81□□□□□ -0.52
C9orf47-203ENST00000375851 CD200P41217 278 aa11.81□□□□□ -0.52
C9orf47-203ENST00000375851 IGSF11Q5DX21 431 aa11.81□□□□□ -0.52
C9orf47-203ENST00000375851 TGIF2LYQ8IUE0 185 aa11.81□□□□□ -0.52
C9orf47-203ENST00000375851 TGIF2LXQ8IUE1 241 aa11.81□□□□□ -0.52
C9orf47-203ENST00000375851 SH2D2AQ9NP31 389 aa11.81□□□□□ -0.52
C9orf47-203ENST00000375851 DOK5Q9P104 306 aa11.81□□□□□ -0.52
C9orf47-203ENST00000375851 WIPI2Q9Y4P8 454 aa11.81□□□□□ -0.52
C9orf47-203ENST00000375851 SERTM2A0A1B0GWG4 89 aa11.81□□□□□ -0.52
C9orf47-203ENST00000375851 RBFOX3A6NFN3 312 aa11.81□□□□□ -0.52
C9orf47-203ENST00000375851 CCL21O00585 134 aa11.81□□□□□ -0.52
C9orf47-203ENST00000375851 OR5I1Q13606 314 aa11.81□□□□□ -0.52
C9orf47-203ENST00000375851 TNXAQ16473 311 aa11.81□□□□□ -0.52
C9orf47-203ENST00000375851 LPAR3Q9UBY5 353 aa11.81□□□□□ -0.52
C9orf47-203ENST00000375851 A0A1B0GU03 582 aa11.8□□□□□ -0.52
C9orf47-203ENST00000375851 ZNF785A8K8V0 405 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms