RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 FAM240AA0A1B0GVK7 77 aa5.28□□□□□ -1.56
SCN2A-202ENST00000375427 RUNX3Q13761 415 aa5.28□□□□□ -1.56
SCN2A-202ENST00000375427 GDF7Q7Z4P5 450 aa5.28□□□□□ -1.56
SCN2A-202ENST00000375427 RNF166Q96A37 237 aaPredicted RBP5.28□□□□□ -1.56
SCN2A-202ENST00000375427 ABHD17AQ96GS6 310 aa5.28□□□□□ -1.56
SCN2A-202ENST00000375427 C14orf144Q96I85 54 aa5.28□□□□□ -1.56
SCN2A-202ENST00000375427 SIRT4Q9Y6E7 314 aaPredicted RBP5.28□□□□□ -1.56
SCN2A-202ENST00000375427 PLIN4Q96Q06 1357 aa5.28□□□□□ -1.56
SCN2A-202ENST00000375427 hADV29S1A0JD25 119 aa5.28□□□□□ -1.56
SCN2A-202ENST00000375427 H3BP45 60 aa5.28□□□□□ -1.56
SCN2A-202ENST00000375427 PEX10O60683 326 aa5.28□□□□□ -1.56
SCN2A-202ENST00000375427 ZFPL1O95159 310 aa5.28□□□□□ -1.56
SCN2A-202ENST00000375427 TCRAP04437 139 aa5.28□□□□□ -1.56
SCN2A-202ENST00000375427 ZNF30P17039 623 aa5.28□□□□□ -1.56
SCN2A-202ENST00000375427 DAD1P61803 113 aa5.28□□□□□ -1.56
SCN2A-202ENST00000375427 DUSP5Q16690 384 aa5.28□□□□□ -1.56
SCN2A-202ENST00000375427 PRNTQ86SH4 94 aa5.28□□□□□ -1.56
SCN2A-202ENST00000375427 OR8B12Q8NGG6 310 aa5.28□□□□□ -1.56
SCN2A-202ENST00000375427 NKD2Q969F2 451 aaPredicted RBP5.28□□□□□ -1.56
SCN2A-202ENST00000375427 MYLKQ15746 1914 aa5.28□□□□□ -1.56
SCN2A-202ENST00000375427 BLACEA4D250 179 aa5.28□□□□□ -1.56
SCN2A-202ENST00000375427 TMEM238C9JI98 176 aa5.28□□□□□ -1.56
SCN2A-202ENST00000375427 SOCS3O14543 225 aa5.28□□□□□ -1.56
SCN2A-202ENST00000375427 NDUFS5O43920 106 aa5.28□□□□□ -1.56
SCN2A-202ENST00000375427 IGFBP4P22692 258 aa5.28□□□□□ -1.56
SCN2A-202ENST00000375427 RAE1P78406 368 aaKnown RBP5.28□□□□□ -1.56
SCN2A-202ENST00000375427 TDGF1P13385 188 aa5.28□□□□□ -1.56
SCN2A-202ENST00000375427 MMP9P14780 707 aa5.28□□□□□ -1.56
SCN2A-202ENST00000375427 PCBP3P57721 371 aaKnown RBP5.28□□□□□ -1.56
SCN2A-202ENST00000375427 GSG1Q2KHT4 349 aa5.28□□□□□ -1.56
SCN2A-202ENST00000375427 CIARTQ8N365 385 aaPredicted RBP5.28□□□□□ -1.56
SCN2A-202ENST00000375427 C11orf44Q8N8P7 122 aa5.28□□□□□ -1.56
SCN2A-202ENST00000375427 KLK15Q9H2R5 256 aa5.28□□□□□ -1.56
SCN2A-202ENST00000375427 C20orf141Q9NUB4 165 aa5.28□□□□□ -1.56
SCN2A-202ENST00000375427 MYBPHLA2RUH7 354 aa5.28□□□□□ -1.56
SCN2A-202ENST00000375427 LOC730098B7Z3J9 87 aa5.28□□□□□ -1.56
SCN2A-202ENST00000375427 FOXH1O75593 365 aa5.28□□□□□ -1.56
SCN2A-202ENST00000375427 HMGN2P05204 90 aaKnown RBP5.28□□□□□ -1.56
SCN2A-202ENST00000375427 IGSF1Q8N6C5 1336 aa5.28□□□□□ -1.56
SCN2A-202ENST00000375427 GALR3O60755 368 aaPredicted RBP5.27□□□□□ -1.57
SCN2A-202ENST00000375427 UNGP13051 313 aaPredicted RBP5.27□□□□□ -1.57
SCN2A-202ENST00000375427 NNATQ16517 81 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 TM4SF20Q53R12 229 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 IBA57Q5T440 356 aaKnown RBP5.27□□□□□ -1.57
SCN2A-202ENST00000375427 C1QTNF12Q5T7M4 302 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 DEFB128Q7Z7B8 93 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 IRF2BP1Q8IU81 584 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 SCGB3A1Q96QR1 104 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 HCFC1R1Q9NWW0 138 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 GPR45Q9Y5Y3 372 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 UGGT2Q9NYU1 1516 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 ODAMA1E959 279 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 C7orf72A4D263 438 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 TRDCB7Z8K6 153 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 GFRA2O00451 464 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 C1orf105O95561 183 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 SNAI1O95863 264 aaPredicted RBP5.27□□□□□ -1.57
SCN2A-202ENST00000375427 CTSDP07339 412 aaPredicted RBP5.27□□□□□ -1.57
SCN2A-202ENST00000375427 SRD5A2P31213 254 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 IFI27P40305 119 aaPredicted RBP5.27□□□□□ -1.57
SCN2A-202ENST00000375427 KCNMB1Q16558 191 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 B3GNT8Q7Z7M8 397 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 LINC00052Q96N35 136 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 TXNDC17Q9BRA2 123 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 LHX5Q9H2C1 402 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 PRDM13Q9H4Q3 707 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 CDK12Q9NYV4 1490 aaPredicted RBP5.27□□□□□ -1.57
SCN2A-202ENST00000375427 PGPA6NDG6 321 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 CDIPTO14735 213 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 SAA1P0DJI8 122 aaPredicted RBP5.27□□□□□ -1.57
SCN2A-202ENST00000375427 MPC1LP0DKB6 136 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 IL11P20809 199 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 RPS24P62847 133 aaKnown RBP5.27□□□□□ -1.57
SCN2A-202ENST00000375427 ELAVL1Q15717 326 aaKnown RBP5.27□□□□□ -1.57
SCN2A-202ENST00000375427 DUX3Q96PT4 197 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 TMEM243Q9BU79 118 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 ABHD14AQ9BUJ0 271 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 LPAR2Q9HBW0 351 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 HRASLS2Q9NWW9 162 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 TAS2R4Q9NYW5 299 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 VDAC3Q9Y277 283 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 RNF11Q9Y3C5 154 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 AFDNP55196 1824 aaKnown RBP5.27□□□□□ -1.57
SCN2A-202ENST00000375427 OVOS2A0A0G2JMS6 1433 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 K7ESF4 209 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 VEGFAP15692 232 aaPredicted RBP5.27□□□□□ -1.57
SCN2A-202ENST00000375427 SUOXP51687 545 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 ZP1P60852 638 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 FUT5Q11128 374 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 C2orf27AQ580R0 203 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 TMEM255AQ5JRV8 349 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 NHLRC3Q5JS37 347 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 SLC23A3Q6PIS1 610 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 HAPLN4Q86UW8 402 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 STPG3Q8N7X2 389 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 CDCA4Q9BXL8 241 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 SMOC2Q9H3U7 446 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 MMP25Q9NPA2 562 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 TOMM7Q9P0U1 55 aa5.27□□□□□ -1.57
SCN2A-202ENST00000375427 CACNA1HO95180 2353 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms