RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 NOX3Q9HBY0 568 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 SH2D2AQ9NP31 389 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 FLRT3Q9NZU0 649 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 PAM16Q9Y3D7 125 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 A0A0B4J2E0 115 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 A0A1B0GX12 115 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 TAAR5O14804 337 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 MPDU1O75352 247 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 TRGC2P03986 189 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 FTH1P19P0C7X4 201 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 IGLC1P0CG04 106 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 SULT1A3P0DMM9 295 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 SULT1A4P0DMN0 295 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 CD34P28906 385 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 GNG4P50150 75 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 ATP4BP51164 291 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 PCBP4P57723 403 aaKnown RBP6.79□□□□□ -1.32
USP48-203ENST00000374732 FAM27E3Q08E93 113 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 ST3GAL2Q16842 350 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 TRMT12Q53H54 448 aaKnown RBP6.79□□□□□ -1.32
USP48-203ENST00000374732 IL34Q6ZMJ4 242 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 OR2L13Q8N349 312 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 ZNF433Q8N7K0 673 aaPredicted RBP6.79□□□□□ -1.32
USP48-203ENST00000374732 OR10G7Q8NGN6 311 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 OR2G3Q8NGZ4 309 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 ZC2HC1AQ96GY0 325 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 OR52D1Q9H346 318 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 POMKQ9H5K3 350 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 ASF1AQ9Y294 204 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 ANKRD36A6QL64 1941 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 OR2T8A6NH00 312 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 NPIPB11E5RHQ5 1161 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 WASP42768 502 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 SEC61A1P61619 476 aaKnown RBP6.79□□□□□ -1.32
USP48-203ENST00000374732 TMEM183BQ1AE95 376 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 ABHD12Q8N2K0 398 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 SLC38A5Q8WUX1 472 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 PP6455Q8WZ26 134 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 RAI2Q9Y5P3 530 aa6.79□□□□□ -1.32
USP48-203ENST00000374732 C7orf71A4D174 169 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 A8MT66 165 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 IDSB3KWA1 339 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 C9JAW5 83 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 LMO7DNF2Z398 122 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 SPINK8P0C7L1 97 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 SFTA3P0C7M3 94 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 LINC00694P0DN24 101 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 GADD45AP24522 165 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 GABRA3P34903 492 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 CTSKP43235 329 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 NKG7Q16617 165 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 HRCT1Q6UXD1 115 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 HAPLN4Q86UW8 402 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 OR6K2Q8NGY2 324 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 RDH5Q92781 318 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 YPEL4Q96NS1 127 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 EBPLQ9BY08 206 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 SYNPO2LQ9H987 977 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 IL36GQ9NZH8 169 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 NTMQ9P121 344 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 DHDHQ9UQ10 334 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 HIGD1AQ9Y241 93 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 TPRKBQ9Y3C4 175 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 TTC3P53804 2025 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 FAM236DA0A1B0GTK5 79 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 FRG2CA6NGY1 282 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 OR51F1A6NGY5 319 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 LILRA5A6NI73 299 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 J3KT08 172 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 M0QYG6 137 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 FAM236CP0DP71 79 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 CR2P20023 1033 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 PSMB1P20618 241 aaKnown RBP6.78□□□□□ -1.32
USP48-203ENST00000374732 STC1P52823 247 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 CATR1Q13166 79 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 RNPS1Q15287 305 aaKnown RBP6.78□□□□□ -1.32
USP48-203ENST00000374732 ARSIQ5FYB1 569 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 MOB1BQ7L9L4 216 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 APRG1Q8IVJ8 170 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 ZNF548Q8NEK5 533 aaPredicted RBP6.78□□□□□ -1.32
USP48-203ENST00000374732 OR4X1Q8NH49 305 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 PLPPR1Q8TBJ4 325 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 SLC25A39Q9BZJ4 359 aaPredicted RBP6.78□□□□□ -1.32
USP48-203ENST00000374732 PRDM14Q9GZV8 571 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 OAZ3Q9UMX2 235 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 CCDC88CQ9P219 2028 aa6.78□□□□□ -1.32
USP48-203ENST00000374732 CDC14CA4D256 554 aa6.77□□□□□ -1.33
USP48-203ENST00000374732 J3QR06 171 aa6.77□□□□□ -1.33
USP48-203ENST00000374732 GEMIN2O14893 280 aaKnown RBP6.77□□□□□ -1.33
USP48-203ENST00000374732 GALR3O60755 368 aaPredicted RBP6.77□□□□□ -1.33
USP48-203ENST00000374732 CT45A10P0DMU9 189 aa6.77□□□□□ -1.33
USP48-203ENST00000374732 ERGP11308 486 aa6.77□□□□□ -1.33
USP48-203ENST00000374732 ACVRL1P37023 503 aa6.77□□□□□ -1.33
USP48-203ENST00000374732 SELENOPP49908 381 aa6.77□□□□□ -1.33
USP48-203ENST00000374732 FMODQ06828 376 aa6.77□□□□□ -1.33
USP48-203ENST00000374732 ZFAND6Q6FIF0 208 aa6.77□□□□□ -1.33
USP48-203ENST00000374732 SFXN4Q6P4A7 337 aa6.77□□□□□ -1.33
USP48-203ENST00000374732 PLPP5Q8NEB5 264 aa6.77□□□□□ -1.33
USP48-203ENST00000374732 SP7Q8TDD2 431 aaPredicted RBP6.77□□□□□ -1.33
USP48-203ENST00000374732 NPVFQ9HCQ7 196 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms