RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 TRAT1Q6PIZ9 186 aa12.49□□□□□ -0.41
PFDN6-202ENST00000374607 BRD3OSQ6XYD6 125 aa12.49□□□□□ -0.41
PFDN6-202ENST00000374607 PRR18Q8N4B5 295 aa12.49□□□□□ -0.41
PFDN6-202ENST00000374607 ARL11Q969Q4 196 aa12.49□□□□□ -0.41
PFDN6-202ENST00000374607 CMSS1Q9BQ75 279 aaKnown RBP12.49□□□□□ -0.41
PFDN6-202ENST00000374607 RIMS4Q9H426 269 aaPredicted RBP12.49□□□□□ -0.41
PFDN6-202ENST00000374607 RHBDL2Q9NX52 303 aa12.49□□□□□ -0.41
PFDN6-202ENST00000374607 CALYQ9NYX4 217 aa12.49□□□□□ -0.41
PFDN6-202ENST00000374607 COMMD3Q9UBI1 195 aa12.49□□□□□ -0.41
PFDN6-202ENST00000374607 FAM96BQ9Y3D0 163 aa12.49□□□□□ -0.41
PFDN6-202ENST00000374607 SESN1Q9Y6P5 492 aa12.49□□□□□ -0.41
PFDN6-202ENST00000374607 KBTBD11-OT1A0A1B0GTJ5 212 aa12.48□□□□□ -0.41
PFDN6-202ENST00000374607 TOR1AO14656 332 aa12.48□□□□□ -0.41
PFDN6-202ENST00000374607 GNB3P16520 340 aa12.48□□□□□ -0.41
PFDN6-202ENST00000374607 UBE2E1P51965 193 aa12.48□□□□□ -0.41
PFDN6-202ENST00000374607 KLF17Q5JT82 389 aaPredicted RBP12.48□□□□□ -0.41
PFDN6-202ENST00000374607 RUSC1-AS1Q66K80 236 aa12.48□□□□□ -0.41
PFDN6-202ENST00000374607 TCF23Q7RTU1 214 aa12.48□□□□□ -0.41
PFDN6-202ENST00000374607 PNKDQ8N490 385 aa12.48□□□□□ -0.41
PFDN6-202ENST00000374607 SAMD12Q8N8I0 201 aa12.48□□□□□ -0.41
PFDN6-202ENST00000374607 OR5H6Q8NGV6 325 aa12.48□□□□□ -0.41
PFDN6-202ENST00000374607 RFESDQ8TAC1 157 aa12.48□□□□□ -0.41
PFDN6-202ENST00000374607 ZNF418Q8TF45 676 aaPredicted RBP12.48□□□□□ -0.41
PFDN6-202ENST00000374607 ACOT12Q8WYK0 555 aa12.48□□□□□ -0.41
PFDN6-202ENST00000374607 ISOC1Q96CN7 298 aa12.48□□□□□ -0.41
PFDN6-202ENST00000374607 S100A16Q96FQ6 103 aaKnown RBP12.48□□□□□ -0.41
PFDN6-202ENST00000374607 SUCNR1Q9BXA5 334 aa12.48□□□□□ -0.41
PFDN6-202ENST00000374607 IDI2-AS1Q9NZ38 188 aa12.48□□□□□ -0.41
PFDN6-202ENST00000374607 AK3Q9UIJ7 227 aa12.48□□□□□ -0.41
PFDN6-202ENST00000374607 SMIM31A0A1B0GVY4 71 aa12.47□□□□□ -0.41
PFDN6-202ENST00000374607 MEIOCA2RUB1 952 aa12.47□□□□□ -0.41
PFDN6-202ENST00000374607 ARG1P05089 322 aa12.47□□□□□ -0.41
PFDN6-202ENST00000374607 ZNF182P17025 639 aaPredicted RBP12.47□□□□□ -0.41
PFDN6-202ENST00000374607 DLX6P56179 175 aa12.47□□□□□ -0.41
PFDN6-202ENST00000374607 SPCS2Q15005 226 aa12.47□□□□□ -0.41
PFDN6-202ENST00000374607 MOGAT2Q3SYC2 334 aa12.47□□□□□ -0.41
PFDN6-202ENST00000374607 UBE2NLQ5JXB2 153 aa12.47□□□□□ -0.41
PFDN6-202ENST00000374607 HEPN1Q6WQI6 88 aa12.47□□□□□ -0.41
PFDN6-202ENST00000374607 ZDHHC16Q969W1 377 aa12.47□□□□□ -0.41
PFDN6-202ENST00000374607 TMEM133Q9H2Q1 129 aa12.47□□□□□ -0.41
PFDN6-202ENST00000374607 UNKLQ9H9P5 680 aaKnown RBP12.47□□□□□ -0.41
PFDN6-202ENST00000374607 ZMAT3Q9HA38 289 aaKnown RBP12.47□□□□□ -0.41
PFDN6-202ENST00000374607 C12orf4Q9NQ89 552 aa12.47□□□□□ -0.41
PFDN6-202ENST00000374607 ZNF69Q9UC07 566 aa12.47□□□□□ -0.41
PFDN6-202ENST00000374607 FAM172BPA6NC97 362 aa12.46□□□□□ -0.41
PFDN6-202ENST00000374607 SERPINE3A8MV23 424 aa12.46□□□□□ -0.41
PFDN6-202ENST00000374607 FAM25AB3EWG3 89 aa12.46□□□□□ -0.41
PFDN6-202ENST00000374607 FAM25CB3EWG5 89 aa12.46□□□□□ -0.41
PFDN6-202ENST00000374607 FAM25GB3EWG6 89 aa12.46□□□□□ -0.41
PFDN6-202ENST00000374607 RNASEK-C17orf49H0YIS7 233 aa12.46□□□□□ -0.41
PFDN6-202ENST00000374607 NPFFO15130 113 aa12.46□□□□□ -0.41
PFDN6-202ENST00000374607 ORC5O43913 435 aa12.46□□□□□ -0.41
PFDN6-202ENST00000374607 HIST1H1DP16402 221 aaKnown RBP12.46□□□□□ -0.41
PFDN6-202ENST00000374607 SSTR5P35346 364 aa12.46□□□□□ -0.41
PFDN6-202ENST00000374607 TMEM50BP56557 158 aa12.46□□□□□ -0.41
PFDN6-202ENST00000374607 C17orf58Q2M2W7 97 aa12.46□□□□□ -0.41
PFDN6-202ENST00000374607 KRTAP21-3Q3LHN1 58 aa12.46□□□□□ -0.41
PFDN6-202ENST00000374607 CDNFQ49AH0 187 aa12.46□□□□□ -0.41
PFDN6-202ENST00000374607 PLAC9Q5JTB6 97 aa12.46□□□□□ -0.41
PFDN6-202ENST00000374607 MOB1BQ7L9L4 216 aa12.46□□□□□ -0.41
PFDN6-202ENST00000374607 MRPL30Q8TCC3 161 aaKnown RBP12.46□□□□□ -0.41
PFDN6-202ENST00000374607 SLC6A7Q99884 636 aa12.46□□□□□ -0.41
PFDN6-202ENST00000374607 CLEC7AQ9BXN2 247 aa12.46□□□□□ -0.41
PFDN6-202ENST00000374607 RSL24D1Q9UHA3 163 aaKnown RBP12.46□□□□□ -0.41
PFDN6-202ENST00000374607 MGAT4AQ9UM21 535 aa12.46□□□□□ -0.41
PFDN6-202ENST00000374607 CEPT1Q9Y6K0 416 aa12.46□□□□□ -0.41
PFDN6-202ENST00000374607 TRAV18A0A075B6X5 111 aa12.45□□□□□ -0.42
PFDN6-202ENST00000374607 H3BMQ9 156 aa12.45□□□□□ -0.42
PFDN6-202ENST00000374607 RAB27BO00194 218 aa12.45□□□□□ -0.42
PFDN6-202ENST00000374607 SDCBPO00560 298 aaPredicted RBP12.45□□□□□ -0.42
PFDN6-202ENST00000374607 RGS5O15539 181 aa12.45□□□□□ -0.42
PFDN6-202ENST00000374607 FSHBP01225 129 aa12.45□□□□□ -0.42
PFDN6-202ENST00000374607 RCC1P18754 421 aaPredicted RBP12.45□□□□□ -0.42
PFDN6-202ENST00000374607 MNDAP41218 407 aa12.45□□□□□ -0.42
PFDN6-202ENST00000374607 PRRX1P54821 245 aa12.45□□□□□ -0.42
PFDN6-202ENST00000374607 GNG2P59768 71 aa12.45□□□□□ -0.42
PFDN6-202ENST00000374607 ABHD12Q8N2K0 398 aa12.45□□□□□ -0.42
PFDN6-202ENST00000374607 C11orf42Q8N5U0 333 aa12.45□□□□□ -0.42
PFDN6-202ENST00000374607 OR10A7Q8NGE5 316 aa12.45□□□□□ -0.42
PFDN6-202ENST00000374607 UBALD1Q8TB05 177 aa12.45□□□□□ -0.42
PFDN6-202ENST00000374607 ZNF596Q8TC21 504 aa12.45□□□□□ -0.42
PFDN6-202ENST00000374607 TAF9BQ9HBM6 251 aa12.45□□□□□ -0.42
PFDN6-202ENST00000374607 GNG12Q9UBI6 72 aa12.45□□□□□ -0.42
PFDN6-202ENST00000374607 A0A0A6YYH2 397 aa12.44□□□□□ -0.42
PFDN6-202ENST00000374607 IGHV2-26A0A0B4J1V2 119 aa12.44□□□□□ -0.42
PFDN6-202ENST00000374607 A6NJ64 397 aa12.44□□□□□ -0.42
PFDN6-202ENST00000374607 FOXI3A8MTJ6 420 aaPredicted RBP12.44□□□□□ -0.42
PFDN6-202ENST00000374607 MMP23AO75900 390 aa12.44□□□□□ -0.42
PFDN6-202ENST00000374607 GSTP1P09211 210 aaKnown RBP12.44□□□□□ -0.42
PFDN6-202ENST00000374607 OLFML2AQ68BL7 652 aa12.44□□□□□ -0.42
PFDN6-202ENST00000374607 RTN4RL2Q86UN3 420 aa12.44□□□□□ -0.42
PFDN6-202ENST00000374607 IZUMO1Q8IYV9 350 aa12.44□□□□□ -0.42
PFDN6-202ENST00000374607 BCL6BQ8N143 479 aaPredicted RBP12.44□□□□□ -0.42
PFDN6-202ENST00000374607 IL1F10Q8WWZ1 152 aa12.44□□□□□ -0.42
PFDN6-202ENST00000374607 TNFRSF14Q92956 283 aa12.44□□□□□ -0.42
PFDN6-202ENST00000374607 GALMQ96C23 342 aa12.44□□□□□ -0.42
PFDN6-202ENST00000374607 KIRREL1Q96J84 757 aa12.44□□□□□ -0.42
PFDN6-202ENST00000374607 JMJD8Q96S16 334 aa12.44□□□□□ -0.42
PFDN6-202ENST00000374607 HDHD3Q9BSH5 251 aaPredicted RBP12.44□□□□□ -0.42
PFDN6-202ENST00000374607 WNK2Q9Y3S1 2297 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms