RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 CCKARP32238 428 aa14.93□□□□□ -0.02
LDLRAP1-201ENST00000374338 CDKN1BP46527 198 aa14.93□□□□□ -0.02
LDLRAP1-201ENST00000374338 KCNMB1Q16558 191 aa14.93□□□□□ -0.02
LDLRAP1-201ENST00000374338 SLC25A47Q6Q0C1 308 aa14.93□□□□□ -0.02
LDLRAP1-201ENST00000374338 TIPARPQ7Z3E1 657 aaKnown RBP14.93□□□□□ -0.02
LDLRAP1-201ENST00000374338 LYZL2Q7Z4W2 148 aa14.93□□□□□ -0.02
LDLRAP1-201ENST00000374338 TMEM105Q8N8V8 129 aa14.93□□□□□ -0.02
LDLRAP1-201ENST00000374338 OXGR1Q96P68 337 aa14.93□□□□□ -0.02
LDLRAP1-201ENST00000374338 PLEK2Q9NYT0 353 aa14.93□□□□□ -0.02
LDLRAP1-201ENST00000374338 A0A0J9YW62 118 aa14.93□□□□□ -0.02
LDLRAP1-201ENST00000374338 CSNK1A1P48729 337 aa14.93□□□□□ -0.02
LDLRAP1-201ENST00000374338 TNFSF10P50591 281 aa14.93□□□□□ -0.02
LDLRAP1-201ENST00000374338 ZFP36L1Q07352 338 aaKnown RBP14.93□□□□□ -0.02
LDLRAP1-201ENST00000374338 PMS2CLQ68D20 193 aa14.93□□□□□ -0.02
LDLRAP1-201ENST00000374338 C11orf42Q8N5U0 333 aa14.93□□□□□ -0.02
LDLRAP1-201ENST00000374338 SUMF1Q8NBK3 374 aa14.93□□□□□ -0.02
LDLRAP1-201ENST00000374338 OR51T1Q8NGJ9 327 aa14.93□□□□□ -0.02
LDLRAP1-201ENST00000374338 C1orf147Q96MC9 270 aaPredicted RBP14.93□□□□□ -0.02
LDLRAP1-201ENST00000374338 ZNF2Q9BSG1 426 aaPredicted RBP14.93□□□□□ -0.02
LDLRAP1-201ENST00000374338 OR2J1Q9GZK6 312 aa14.93□□□□□ -0.02
LDLRAP1-201ENST00000374338 SMG1Q96Q15 3661 aaKnown RBP14.92□□□□□ -0.02
LDLRAP1-201ENST00000374338 YLPM1P49750 1951 aaKnown RBP14.92□□□□□ -0.02
LDLRAP1-201ENST00000374338 MED13Q9UHV7 2174 aa14.92□□□□□ -0.02
LDLRAP1-201ENST00000374338 IGHV1-45A0A0A0MS14 117 aa14.92□□□□□ -0.02
LDLRAP1-201ENST00000374338 NPIPA2E9PIF3 369 aa14.92□□□□□ -0.02
LDLRAP1-201ENST00000374338 NPIPA3F8WFD2 350 aa14.92□□□□□ -0.02
LDLRAP1-201ENST00000374338 SPRY1O43609 319 aaPredicted RBP14.92□□□□□ -0.02
LDLRAP1-201ENST00000374338 LCATP04180 440 aa14.92□□□□□ -0.02
LDLRAP1-201ENST00000374338 CLDND2Q8NHS1 167 aa14.92□□□□□ -0.02
LDLRAP1-201ENST00000374338 ACY3Q96HD9 319 aa14.92□□□□□ -0.02
LDLRAP1-201ENST00000374338 ZIC3O60481 467 aa14.92□□□□□ -0.02
LDLRAP1-201ENST00000374338 NXPH3O95157 252 aa14.92□□□□□ -0.02
LDLRAP1-201ENST00000374338 CD55P08174 381 aa14.92□□□□□ -0.02
LDLRAP1-201ENST00000374338 COX6A1P12074 109 aa14.92□□□□□ -0.02
LDLRAP1-201ENST00000374338 FCGR2AP12318 317 aa14.92□□□□□ -0.02
LDLRAP1-201ENST00000374338 MMP9P14780 707 aa14.92□□□□□ -0.02
LDLRAP1-201ENST00000374338 ATP6V0CP27449 155 aa14.92□□□□□ -0.02
LDLRAP1-201ENST00000374338 RPL23AP62750 156 aaKnown RBP14.92□□□□□ -0.02
LDLRAP1-201ENST00000374338 WFIKKN1Q96NZ8 548 aa14.92□□□□□ -0.02
LDLRAP1-201ENST00000374338 ANGPTL4Q9BY76 406 aa14.92□□□□□ -0.02
LDLRAP1-201ENST00000374338 LIME1Q9H400 295 aa14.92□□□□□ -0.02
LDLRAP1-201ENST00000374338 C19orf25Q9UFG5 118 aaPredicted RBP14.92□□□□□ -0.02
LDLRAP1-201ENST00000374338 NAGKQ9UJ70 344 aa14.92□□□□□ -0.02
LDLRAP1-201ENST00000374338 RRADP55042 308 aa14.91□□□□□ -0.02
LDLRAP1-201ENST00000374338 FXYD4P59646 89 aa14.91□□□□□ -0.02
LDLRAP1-201ENST00000374338 RSPO1Q2MKA7 263 aaPredicted RBP14.91□□□□□ -0.02
LDLRAP1-201ENST00000374338 CHRFAM7AQ494W8 412 aa14.91□□□□□ -0.02
LDLRAP1-201ENST00000374338 PHLDA2Q53GA4 152 aa14.91□□□□□ -0.02
LDLRAP1-201ENST00000374338 WDR25Q64LD2 544 aaPredicted RBP14.91□□□□□ -0.02
LDLRAP1-201ENST00000374338 FAM90A2PQ658T7 463 aa14.91□□□□□ -0.02
LDLRAP1-201ENST00000374338 ZNF100Q8IYN0 542 aa14.91□□□□□ -0.02
LDLRAP1-201ENST00000374338 C14orf166Q9Y224 244 aaKnown RBP14.91□□□□□ -0.02
LDLRAP1-201ENST00000374338 PIGLQ9Y2B2 252 aa14.91□□□□□ -0.02
LDLRAP1-201ENST00000374338 DOCK10Q96BY6 2186 aa14.91□□□□□ -0.02
LDLRAP1-201ENST00000374338 SVILO95425 2214 aa14.91□□□□□ -0.02
LDLRAP1-201ENST00000374338 NCKAP5O14513 1909 aa14.91□□□□□ -0.02
LDLRAP1-201ENST00000374338 RP1L1Q8IWN7 2480 aaPredicted RBP14.91□□□□□ -0.02
LDLRAP1-201ENST00000374338 A0A1W2PNV4 684 aa14.91□□□□□ -0.02
LDLRAP1-201ENST00000374338 FAM230AA0A1W2PPH8 454 aa14.91□□□□□ -0.02
LDLRAP1-201ENST00000374338 AQP7P3A6NL99 342 aa14.91□□□□□ -0.02
LDLRAP1-201ENST00000374338 B4GALT1P15291 398 aa14.91□□□□□ -0.02
LDLRAP1-201ENST00000374338 HNF1AP20823 631 aa14.91□□□□□ -0.02
LDLRAP1-201ENST00000374338 BLVRBP30043 206 aaPredicted RBP14.91□□□□□ -0.02
LDLRAP1-201ENST00000374338 GUCA1AP43080 201 aaPredicted RBP14.91□□□□□ -0.02
LDLRAP1-201ENST00000374338 VAMP2P63027 116 aa14.91□□□□□ -0.02
LDLRAP1-201ENST00000374338 SRYQ05066 204 aa14.91□□□□□ -0.02
LDLRAP1-201ENST00000374338 CLEC12BQ2HXU8 276 aa14.91□□□□□ -0.02
LDLRAP1-201ENST00000374338 SLC23A3Q6PIS1 610 aa14.91□□□□□ -0.02
LDLRAP1-201ENST00000374338 DEGS2Q6QHC5 323 aa14.91□□□□□ -0.02
LDLRAP1-201ENST00000374338 SSX7Q7RTT5 188 aa14.91□□□□□ -0.02
LDLRAP1-201ENST00000374338 C6orf201Q7Z4U5 140 aa14.91□□□□□ -0.02
LDLRAP1-201ENST00000374338 NSG1A0A0A6YYJ2 146 aa14.9□□□□□ -0.02
LDLRAP1-201ENST00000374338 PPP5D1E7EU14 171 aa14.9□□□□□ -0.02
LDLRAP1-201ENST00000374338 TMEM11P17152 192 aa14.9□□□□□ -0.02
LDLRAP1-201ENST00000374338 OR10J1P30954 320 aa14.9□□□□□ -0.02
LDLRAP1-201ENST00000374338 WNT5AP41221 380 aa14.9□□□□□ -0.02
LDLRAP1-201ENST00000374338 SUMO3P55854 103 aaPredicted RBP14.9□□□□□ -0.02
LDLRAP1-201ENST00000374338 KISS1Q15726 138 aa14.9□□□□□ -0.02
LDLRAP1-201ENST00000374338 RPS19BP1Q86WX3 136 aaKnown RBP14.9□□□□□ -0.02
LDLRAP1-201ENST00000374338 SULF2Q8IWU5 870 aa14.9□□□□□ -0.02
LDLRAP1-201ENST00000374338 EXTL1Q92935 676 aa14.9□□□□□ -0.02
LDLRAP1-201ENST00000374338 NUDT16L1Q9BRJ7 211 aaKnown RBP14.9□□□□□ -0.02
LDLRAP1-201ENST00000374338 GSTP1P09211 210 aaKnown RBP14.9□□□□□ -0.02
LDLRAP1-201ENST00000374338 OPRM1P35372 400 aa14.9□□□□□ -0.02
LDLRAP1-201ENST00000374338 RAB11AP62491 216 aa14.9□□□□□ -0.02
LDLRAP1-201ENST00000374338 PNRC1Q12796 327 aaPredicted RBP14.9□□□□□ -0.02
LDLRAP1-201ENST00000374338 NUFIP2Q7Z417 695 aaKnown RBP14.9□□□□□ -0.02
LDLRAP1-201ENST00000374338 TMEM37Q8WXS4 190 aa14.9□□□□□ -0.02
LDLRAP1-201ENST00000374338 FOXJ2Q9P0K8 574 aa14.9□□□□□ -0.02
LDLRAP1-201ENST00000374338 R4GN57 208 aa14.9□□□□□ -0.02
LDLRAP1-201ENST00000374338 DIDO1Q9BTC0 2240 aaKnown RBP14.9□□□□□ -0.02
LDLRAP1-201ENST00000374338 SPTBN2O15020 2390 aa14.9□□□□□ -0.02
LDLRAP1-201ENST00000374338 A8MXE2 369 aa14.89□□□□□ -0.03
LDLRAP1-201ENST00000374338 B4E171 279 aa14.89□□□□□ -0.03
LDLRAP1-201ENST00000374338 DKK1O94907 266 aa14.89□□□□□ -0.03
LDLRAP1-201ENST00000374338 NXPH2O95156 264 aa14.89□□□□□ -0.03
LDLRAP1-201ENST00000374338 CEACAM8P31997 349 aaPredicted RBP14.89□□□□□ -0.03
LDLRAP1-201ENST00000374338 RUNX1Q01196 453 aa14.89□□□□□ -0.03
LDLRAP1-201ENST00000374338 WIPI1Q5MNZ9 446 aaPredicted RBP14.89□□□□□ -0.03
LDLRAP1-201ENST00000374338 MGAQ8IWI9 3026 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms