RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 PRF1P14222 555 aa6.73□□□□□ -1.33
HERC4-202ENST00000373700 RBM11P57052 281 aaKnown RBP6.73□□□□□ -1.33
HERC4-202ENST00000373700 FAM3AP98173 230 aa6.73□□□□□ -1.33
HERC4-202ENST00000373700 CXorf66Q5JRM2 361 aaPredicted RBP6.73□□□□□ -1.33
HERC4-202ENST00000373700 FBXW9Q5XUX1 488 aa6.73□□□□□ -1.33
HERC4-202ENST00000373700 C5orf24Q7Z6I8 188 aa6.73□□□□□ -1.33
HERC4-202ENST00000373700 SCCPDHQ8NBX0 429 aa6.73□□□□□ -1.33
HERC4-202ENST00000373700 FGFBP3Q8TAT2 258 aa6.73□□□□□ -1.33
HERC4-202ENST00000373700 MRGPRFQ96AM1 343 aa6.73□□□□□ -1.33
HERC4-202ENST00000373700 MMP26Q9NRE1 261 aa6.73□□□□□ -1.33
HERC4-202ENST00000373700 IL36RNQ9UBH0 155 aa6.73□□□□□ -1.33
HERC4-202ENST00000373700 CSPG4Q6UVK1 2322 aa6.73□□□□□ -1.33
HERC4-202ENST00000373700 IGKV1D-8A0A087WSZ0 117 aa6.73□□□□□ -1.33
HERC4-202ENST00000373700 TRAV14DV4A0A0A6YYC5 116 aa6.73□□□□□ -1.33
HERC4-202ENST00000373700 FAM87AP0C7U9 286 aa6.73□□□□□ -1.33
HERC4-202ENST00000373700 ZNF17P17021 662 aa6.73□□□□□ -1.33
HERC4-202ENST00000373700 TNFSF4P23510 183 aa6.73□□□□□ -1.33
HERC4-202ENST00000373700 GPR12P47775 334 aa6.73□□□□□ -1.33
HERC4-202ENST00000373700 HOXA1P49639 335 aaPredicted RBP6.73□□□□□ -1.33
HERC4-202ENST00000373700 SLC25A40Q8TBP6 338 aa6.73□□□□□ -1.33
HERC4-202ENST00000373700 SSX3Q99909 188 aa6.73□□□□□ -1.33
HERC4-202ENST00000373700 SCNM1Q9BWG6 230 aa6.73□□□□□ -1.33
HERC4-202ENST00000373700 ZNF107Q9UII5 783 aaPredicted RBP6.73□□□□□ -1.33
HERC4-202ENST00000373700 LRRC3CA6NJW4 275 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 H7C1Q1 480 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 LINC01387J3KSC0 135 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 HBE1P02100 147 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 LPAR6P43657 344 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 DYNLT3P51808 116 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 UBE2G2P60604 165 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 KIAA0141Q14154 515 aaPredicted RBP6.72□□□□□ -1.33
HERC4-202ENST00000373700 LY6G6FQ5SQ64 297 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 ATRAIDQ6UW56 229 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 OVCH2Q7RTZ1 564 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 WDFY1Q8IWB7 410 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 MRPS24Q96EL2 167 aaKnown RBP6.72□□□□□ -1.33
HERC4-202ENST00000373700 PHYHIPLQ96FC7 376 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 OR2D2Q9H210 308 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 TAAR3PQ9P1P4 343 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 A0A0A6YYD4 124 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 PIGBOS1A0A0B4J2F0 54 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 LRP5LA4QPB2 252 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 MPGP29372 298 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 ERVS71-1P61550 626 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 AESQ08117 197 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 Q3ZCU0 254 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 VWA1Q6PCB0 445 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 HIST2H3AQ71DI3 136 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 FADS6Q8N9I5 356 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 OR52M1Q8NGK5 317 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 LYZL4Q96KX0 146 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 TLNRD1Q9H1K6 362 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 HEXA-AS1Q9H8Q6 139 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 SERTAD4Q9NUC0 356 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 ZNF581Q9P0T4 197 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 NCOA6Q14686 2063 aaPredicted RBP6.72□□□□□ -1.33
HERC4-202ENST00000373700 ZNF727A8MUV8 499 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 ACTL6AO96019 429 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 MBPP02686 304 aaPredicted RBP6.72□□□□□ -1.33
HERC4-202ENST00000373700 ZNF787Q6DD87 383 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 PUSL1Q8N0Z8 303 aaKnown RBP6.72□□□□□ -1.33
HERC4-202ENST00000373700 ZNF610Q8N9Z0 462 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 GNPNAT1Q96EK6 184 aaPredicted RBP6.72□□□□□ -1.33
HERC4-202ENST00000373700 Q96M66 194 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 PFDN5Q99471 154 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 RSRP1Q9BUV0 290 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 ARV1Q9H2C2 271 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 NIT2Q9NQR4 276 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 GAB2Q9UQC2 676 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 PRELID3BQ9Y3B1 194 aa6.72□□□□□ -1.33
HERC4-202ENST00000373700 M0R1X1 148 aa6.71□□□□□ -1.33
HERC4-202ENST00000373700 PSG2P11465 335 aa6.71□□□□□ -1.33
HERC4-202ENST00000373700 SLC25A4P12235 298 aa6.71□□□□□ -1.33
HERC4-202ENST00000373700 MUC1P15941 1255 aaPredicted RBP6.71□□□□□ -1.33
HERC4-202ENST00000373700 RAB31Q13636 194 aa6.71□□□□□ -1.33
HERC4-202ENST00000373700 PLGLAQ15195 96 aa6.71□□□□□ -1.33
HERC4-202ENST00000373700 SURF2Q15527 256 aaPredicted RBP6.71□□□□□ -1.33
HERC4-202ENST00000373700 BIVMQ86UB2 503 aa6.71□□□□□ -1.33
HERC4-202ENST00000373700 OR10P1Q8NGE3 313 aa6.71□□□□□ -1.33
HERC4-202ENST00000373700 RIMS4Q9H426 269 aaPredicted RBP6.71□□□□□ -1.33
HERC4-202ENST00000373700 MED9Q9NWA0 146 aa6.71□□□□□ -1.33
HERC4-202ENST00000373700 SEMA5BQ9P283 1151 aa6.71□□□□□ -1.33
HERC4-202ENST00000373700 MFSD2BA6NFX1 497 aa6.71□□□□□ -1.34
HERC4-202ENST00000373700 ZNF705GA8MUZ8 300 aaPredicted RBP6.71□□□□□ -1.34
HERC4-202ENST00000373700 TRDCB7Z8K6 153 aa6.71□□□□□ -1.34
HERC4-202ENST00000373700 AQP7O14520 342 aa6.71□□□□□ -1.34
HERC4-202ENST00000373700 FCGR3BO75015 233 aa6.71□□□□□ -1.34
HERC4-202ENST00000373700 NQO2P16083 231 aa6.71□□□□□ -1.34
HERC4-202ENST00000373700 GNG10P50151 68 aa6.71□□□□□ -1.34
HERC4-202ENST00000373700 TNFSF10P50591 281 aa6.71□□□□□ -1.34
HERC4-202ENST00000373700 SNRPEP62304 92 aaKnown RBP6.71□□□□□ -1.34
HERC4-202ENST00000373700 ASPHD2Q6ICH7 369 aa6.71□□□□□ -1.34
HERC4-202ENST00000373700 LRRC29Q8WV35 223 aa6.71□□□□□ -1.34
HERC4-202ENST00000373700 LIN7CQ9NUP9 197 aaKnown RBP6.71□□□□□ -1.34
HERC4-202ENST00000373700 RCC2Q9P258 522 aaKnown RBP6.71□□□□□ -1.34
HERC4-202ENST00000373700 RPH3ALQ9UNE2 315 aa6.71□□□□□ -1.34
HERC4-202ENST00000373700 ANKHD1Q8IWZ3 2542 aaKnown RBP6.71□□□□□ -1.34
HERC4-202ENST00000373700 A0A1W2PPE3 182 aa6.71□□□□□ -1.34
HERC4-202ENST00000373700 RNF222A6NCQ9 220 aa6.71□□□□□ -1.34
HERC4-202ENST00000373700 NPIPB13A6NJU9 1138 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms