RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 NPIPB9F8W1W9 429 aa9.27□□□□□ -0.93
PGK1-201ENST00000373316 NANOS3P60323 173 aaKnown RBP9.27□□□□□ -0.93
PGK1-201ENST00000373316 LTC4SQ16873 150 aa9.27□□□□□ -0.93
PGK1-201ENST00000373316 SLC25A53Q5H9E4 307 aa9.27□□□□□ -0.93
PGK1-201ENST00000373316 SCCPDHQ8NBX0 429 aa9.27□□□□□ -0.93
PGK1-201ENST00000373316 PIPOXQ9P0Z9 390 aa9.27□□□□□ -0.93
PGK1-201ENST00000373316 CACNG5Q9UF02 275 aa9.27□□□□□ -0.93
PGK1-201ENST00000373316 KLK13Q9UKR3 277 aa9.27□□□□□ -0.93
PGK1-201ENST00000373316 ARID1BQ8NFD5 2236 aaPredicted RBP9.27□□□□□ -0.93
PGK1-201ENST00000373316 CTRB1P17538 263 aa9.27□□□□□ -0.93
PGK1-201ENST00000373316 STARD6P59095 220 aa9.27□□□□□ -0.93
PGK1-201ENST00000373316 CTRB2Q6GPI1 263 aa9.27□□□□□ -0.93
PGK1-201ENST00000373316 SLC35E3Q7Z769 313 aa9.27□□□□□ -0.93
PGK1-201ENST00000373316 DNASE2BQ8WZ79 361 aa9.27□□□□□ -0.93
PGK1-201ENST00000373316 TMEM54Q969K7 222 aa9.27□□□□□ -0.93
PGK1-201ENST00000373316 LSM10Q969L4 123 aaKnown RBP9.27□□□□□ -0.93
PGK1-201ENST00000373316 IL36GQ9NZH8 169 aa9.27□□□□□ -0.93
PGK1-201ENST00000373316 VSIG4Q9Y279 399 aa9.27□□□□□ -0.93
PGK1-201ENST00000373316 FRYQ5TBA9 3013 aa9.26□□□□□ -0.93
PGK1-201ENST00000373316 M0R1X1 148 aa9.26□□□□□ -0.93
PGK1-201ENST00000373316 CLN5O75503 358 aa9.26□□□□□ -0.93
PGK1-201ENST00000373316 GABRA4P48169 554 aa9.26□□□□□ -0.93
PGK1-201ENST00000373316 C1orf210Q8IVY1 113 aa9.26□□□□□ -0.93
PGK1-201ENST00000373316 MOB3AQ96BX8 217 aa9.26□□□□□ -0.93
PGK1-201ENST00000373316 SFXN3Q9BWM7 321 aa9.26□□□□□ -0.93
PGK1-201ENST00000373316 ANKRD10Q9NXR5 420 aa9.26□□□□□ -0.93
PGK1-201ENST00000373316 SIRT4Q9Y6E7 314 aaPredicted RBP9.26□□□□□ -0.93
PGK1-201ENST00000373316 SOCS1O15524 211 aa9.26□□□□□ -0.93
PGK1-201ENST00000373316 PTBP3O95758 552 aaKnown RBP9.26□□□□□ -0.93
PGK1-201ENST00000373316 TMEM183BQ1AE95 376 aa9.26□□□□□ -0.93
PGK1-201ENST00000373316 BSXQ3C1V8 233 aa9.26□□□□□ -0.93
PGK1-201ENST00000373316 VHLLQ6RSH7 139 aa9.26□□□□□ -0.93
PGK1-201ENST00000373316 ZAR1Q86SH2 424 aa9.26□□□□□ -0.93
PGK1-201ENST00000373316 SLC25A40Q8TBP6 338 aa9.26□□□□□ -0.93
PGK1-201ENST00000373316 SLC25A38Q96DW6 304 aa9.26□□□□□ -0.93
PGK1-201ENST00000373316 C19orf24Q9BVV8 132 aa9.26□□□□□ -0.93
PGK1-201ENST00000373316 TMEM231Q9H6L2 316 aa9.26□□□□□ -0.93
PGK1-201ENST00000373316 SEBOXQ9HB31 216 aaPredicted RBP9.26□□□□□ -0.93
PGK1-201ENST00000373316 FAM206AQ9NX38 181 aa9.26□□□□□ -0.93
PGK1-201ENST00000373316 TIMM9Q9Y5J7 89 aa9.26□□□□□ -0.93
PGK1-201ENST00000373316 OR7C2O60412 319 aa9.26□□□□□ -0.93
PGK1-201ENST00000373316 AGFG1P52594 562 aaKnown RBP9.26□□□□□ -0.93
PGK1-201ENST00000373316 EIF4E3Q8N5X7 224 aaKnown RBP9.26□□□□□ -0.93
PGK1-201ENST00000373316 RAB24Q969Q5 203 aa9.26□□□□□ -0.93
PGK1-201ENST00000373316 LINC00052Q96N35 136 aa9.26□□□□□ -0.93
PGK1-201ENST00000373316 C20orf24Q9BUV8 137 aa9.26□□□□□ -0.93
PGK1-201ENST00000373316 LPAR5Q9H1C0 372 aa9.26□□□□□ -0.93
PGK1-201ENST00000373316 HES4Q9HCC6 221 aa9.26□□□□□ -0.93
PGK1-201ENST00000373316 CRYM-AS1A6NIL9 109 aa9.26□□□□□ -0.93
PGK1-201ENST00000373316 CXorf1O96002 111 aa9.26□□□□□ -0.93
PGK1-201ENST00000373316 FCGR3AP08637 254 aa9.26□□□□□ -0.93
PGK1-201ENST00000373316 LINC01590Q5TEZ4 76 aa9.26□□□□□ -0.93
PGK1-201ENST00000373316 FBXW9Q5XUX1 488 aa9.26□□□□□ -0.93
PGK1-201ENST00000373316 ETV3LQ6ZN32 361 aa9.26□□□□□ -0.93
PGK1-201ENST00000373316 CMBLQ96DG6 245 aa9.26□□□□□ -0.93
PGK1-201ENST00000373316 RNF122Q9H9V4 155 aa9.26□□□□□ -0.93
PGK1-201ENST00000373316 PITPNC1Q9UKF7 332 aa9.26□□□□□ -0.93
PGK1-201ENST00000373316 CACNA1HO95180 2353 aa9.25□□□□□ -0.93
PGK1-201ENST00000373316 TOX4O94842 621 aa9.25□□□□□ -0.93
PGK1-201ENST00000373316 HOXA6P31267 233 aa9.25□□□□□ -0.93
PGK1-201ENST00000373316 RND3P61587 244 aa9.25□□□□□ -0.93
PGK1-201ENST00000373316 FABP9Q0Z7S8 132 aa9.25□□□□□ -0.93
PGK1-201ENST00000373316 TRMT61AQ96FX7 289 aaKnown RBP9.25□□□□□ -0.93
PGK1-201ENST00000373316 AAMDCQ9H7C9 122 aa9.25□□□□□ -0.93
PGK1-201ENST00000373316 FAM24AA6NFZ4 105 aa9.25□□□□□ -0.93
PGK1-201ENST00000373316 TMEM14DPA8MWL7 114 aa9.25□□□□□ -0.93
PGK1-201ENST00000373316 HAND1O96004 215 aa9.25□□□□□ -0.93
PGK1-201ENST00000373316 MT-ND6P03923 174 aa9.25□□□□□ -0.93
PGK1-201ENST00000373316 SIGLEC14Q08ET2 396 aa9.25□□□□□ -0.93
PGK1-201ENST00000373316 NHLRC3Q5JS37 347 aa9.25□□□□□ -0.93
PGK1-201ENST00000373316 CYB5R2Q6BCY4 276 aa9.25□□□□□ -0.93
PGK1-201ENST00000373316 TMEM52Q8NDY8 209 aa9.25□□□□□ -0.93
PGK1-201ENST00000373316 OR4F17Q8NGA8 305 aa9.25□□□□□ -0.93
PGK1-201ENST00000373316 SOSTQ9BQB4 213 aa9.25□□□□□ -0.93
PGK1-201ENST00000373316 TM2D1Q9BX74 207 aa9.25□□□□□ -0.93
PGK1-201ENST00000373316 ESRP2Q9H6T0 727 aaKnown RBP9.25□□□□□ -0.93
PGK1-201ENST00000373316 IGHV1-45A0A0A0MS14 117 aa9.25□□□□□ -0.93
PGK1-201ENST00000373316 NMBP08949 121 aa9.25□□□□□ -0.93
PGK1-201ENST00000373316 F2RP25116 425 aa9.25□□□□□ -0.93
PGK1-201ENST00000373316 FAM3BP58499 235 aaPredicted RBP9.25□□□□□ -0.93
PGK1-201ENST00000373316 P2RY6Q15077 328 aa9.25□□□□□ -0.93
PGK1-201ENST00000373316 MYPOPQ86VE0 399 aaPredicted RBP9.25□□□□□ -0.93
PGK1-201ENST00000373316 OR2T10Q8NGZ9 312 aa9.25□□□□□ -0.93
PGK1-201ENST00000373316 GPR27Q9NS67 375 aa9.25□□□□□ -0.93
PGK1-201ENST00000373316 URB1O60287 2271 aaKnown RBP9.25□□□□□ -0.93
PGK1-201ENST00000373316 ASCC3Q8N3C0 2202 aaKnown RBP9.25□□□□□ -0.93
PGK1-201ENST00000373316 IGHV3-9P01782 118 aa9.25□□□□□ -0.93
PGK1-201ENST00000373316 ZNF883P0CG24 379 aa9.25□□□□□ -0.93
PGK1-201ENST00000373316 VSIG10L2P0DP72 767 aa9.25□□□□□ -0.93
PGK1-201ENST00000373316 NQO2P16083 231 aa9.25□□□□□ -0.93
PGK1-201ENST00000373316 GNG4P50150 75 aa9.25□□□□□ -0.93
PGK1-201ENST00000373316 DYNLT3P51808 116 aa9.25□□□□□ -0.93
PGK1-201ENST00000373316 BHLHA15Q7RTS1 189 aaPredicted RBP9.25□□□□□ -0.93
PGK1-201ENST00000373316 PERPQ96FX8 193 aa9.25□□□□□ -0.93
PGK1-201ENST00000373316 GNRHR2Q96P88 292 aa9.25□□□□□ -0.93
PGK1-201ENST00000373316 TMEM222Q9H0R3 208 aa9.25□□□□□ -0.93
PGK1-201ENST00000373316 WDR13Q9H1Z4 485 aa9.25□□□□□ -0.93
PGK1-201ENST00000373316 TECTAO75443 2155 aa9.24□□□□□ -0.93
PGK1-201ENST00000373316 IGKV3-11P04433 115 aa9.24□□□□□ -0.93
PGK1-201ENST00000373316 FAM157BP0CG42 384 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms