RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 WISP1O95388 367 aa8.24□□□□□ -1.09
SF3A3-201ENST00000373019 ZNF17P17021 662 aa8.24□□□□□ -1.09
SF3A3-201ENST00000373019 BLVRBP30043 206 aaPredicted RBP8.24□□□□□ -1.09
SF3A3-201ENST00000373019 TSPOP30536 169 aa8.24□□□□□ -1.09
SF3A3-201ENST00000373019 APOBEC3AP31941 199 aaPredicted RBP8.24□□□□□ -1.09
SF3A3-201ENST00000373019 LTBRP36941 435 aa8.24□□□□□ -1.09
SF3A3-201ENST00000373019 MRPS34P82930 218 aaKnown RBP8.24□□□□□ -1.09
SF3A3-201ENST00000373019 ZNF765Q7L2R6 523 aa8.24□□□□□ -1.09
SF3A3-201ENST00000373019 ERASQ7Z444 233 aa8.24□□□□□ -1.09
SF3A3-201ENST00000373019 GATSQ8NAP1 163 aa8.24□□□□□ -1.09
SF3A3-201ENST00000373019 OR51T1Q8NGJ9 327 aa8.24□□□□□ -1.09
SF3A3-201ENST00000373019 SSC4DQ8WTU2 575 aa8.24□□□□□ -1.09
SF3A3-201ENST00000373019 RSG1Q9BU20 258 aa8.24□□□□□ -1.09
SF3A3-201ENST00000373019 PARLQ9H300 379 aa8.24□□□□□ -1.09
SF3A3-201ENST00000373019 CLN8Q9UBY8 286 aa8.24□□□□□ -1.09
SF3A3-201ENST00000373019 OR5B21A6NL26 309 aa8.24□□□□□ -1.09
SF3A3-201ENST00000373019 PNMTP11086 282 aa8.24□□□□□ -1.09
SF3A3-201ENST00000373019 CAPZBP47756 277 aa8.24□□□□□ -1.09
SF3A3-201ENST00000373019 CCR5P51681 352 aa8.24□□□□□ -1.09
SF3A3-201ENST00000373019 NNATQ16517 81 aa8.24□□□□□ -1.09
SF3A3-201ENST00000373019 WBP2NLQ6ICG8 309 aa8.24□□□□□ -1.09
SF3A3-201ENST00000373019 DYRK2Q92630 601 aa8.24□□□□□ -1.09
SF3A3-201ENST00000373019 BCL2L2Q92843 193 aaPredicted RBP8.24□□□□□ -1.09
SF3A3-201ENST00000373019 UHRF2Q96PU4 802 aa8.24□□□□□ -1.09
SF3A3-201ENST00000373019 NXT1Q9UKK6 140 aaKnown RBP8.24□□□□□ -1.09
SF3A3-201ENST00000373019 CACNA1EQ15878 2313 aa8.24□□□□□ -1.09
SF3A3-201ENST00000373019 CCDC163A0A0D9SF12 145 aa8.24□□□□□ -1.09
SF3A3-201ENST00000373019 A0A0U1RQK1 487 aa8.24□□□□□ -1.09
SF3A3-201ENST00000373019 CYR61O00622 381 aa8.24□□□□□ -1.09
SF3A3-201ENST00000373019 TNFRSF10CO14798 259 aa8.24□□□□□ -1.09
SF3A3-201ENST00000373019 GPR75O95800 540 aa8.24□□□□□ -1.09
SF3A3-201ENST00000373019 NKX2-1P43699 371 aaPredicted RBP8.24□□□□□ -1.09
SF3A3-201ENST00000373019 RPS20P60866 119 aaKnown RBP8.24□□□□□ -1.09
SF3A3-201ENST00000373019 FAM78BQ5VT40 261 aa8.24□□□□□ -1.09
SF3A3-201ENST00000373019 ZNF440Q8IYI8 595 aa8.24□□□□□ -1.09
SF3A3-201ENST00000373019 ATP5SQ99766 215 aa8.24□□□□□ -1.09
SF3A3-201ENST00000373019 RPP25Q9BUL9 199 aaKnown RBP8.24□□□□□ -1.09
SF3A3-201ENST00000373019 PATZ1Q9HBE1 687 aaKnown RBP8.24□□□□□ -1.09
SF3A3-201ENST00000373019 VDAC3Q9Y277 283 aa8.24□□□□□ -1.09
SF3A3-201ENST00000373019 PTPRSQ13332 1948 aa8.24□□□□□ -1.09
SF3A3-201ENST00000373019 WDFY4Q6ZS81 3184 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 DOCK11Q5JSL3 2073 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 HS3ST1O14792 307 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 GDF9O60383 454 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 ZNF737O75373 536 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 EFEMP2O95967 443 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 PDGFBP01127 241 aaPredicted RBP8.23□□□□□ -1.09
SF3A3-201ENST00000373019 ZNF728P0DKX0 622 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 BLKP51451 505 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 CLDN18P56856 261 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 RIPPLY3P57055 190 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 MEF2BQ02080 365 aaPredicted RBP8.23□□□□□ -1.09
SF3A3-201ENST00000373019 POU3F1Q03052 451 aaPredicted RBP8.23□□□□□ -1.09
SF3A3-201ENST00000373019 FBXO42Q6P3S6 717 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 C6orf201Q7Z4U5 140 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 MCEMP1Q8IX19 187 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 CADM4Q8NFZ8 388 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 ABHD3Q8WU67 409 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 SLAMF6Q96DU3 332 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 ANXA10Q9UJ72 324 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 MRPS16Q9Y3D3 137 aaKnown RBP8.23□□□□□ -1.09
SF3A3-201ENST00000373019 MYO7BQ6PIF6 2116 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 AQP7P3A6NL99 342 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 POU2F2P09086 479 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 PAX9P55771 341 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 YPEL3P61236 119 aaPredicted RBP8.23□□□□□ -1.09
SF3A3-201ENST00000373019 RPL27P61353 136 aaKnown RBP8.23□□□□□ -1.09
SF3A3-201ENST00000373019 SUMO1P63165 101 aaKnown RBP8.23□□□□□ -1.09
SF3A3-201ENST00000373019 ZP4Q12836 540 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 MSMO1Q15800 293 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 WFDC8Q8IUA0 241 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 RAB42Q8N4Z0 105 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 PSMF1Q92530 271 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 IRF7Q92985 503 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 VSTM2LQ96N03 204 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 PBOV1Q9GZY1 135 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 KLHL13Q9P2N7 655 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 PILRAQ9UKJ1 303 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 SPTBN5Q9NRC6 3674 aaKnown RBP8.23□□□□□ -1.09
SF3A3-201ENST00000373019 IGKV1-9A0A0C4DH69 117 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 IGLC7A0M8Q6 106 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 SERPINE3A8MV23 424 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 DIRC3C9JPN6 131 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 WASP42768 502 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 RRADP55042 308 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 OR4F17Q8NGA8 305 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 NT5CQ8TCD5 201 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 TM4SF19Q96DZ7 209 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 SMIM12Q96EX1 92 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 SLC46A1Q96NT5 459 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 SIGLEC12Q96PQ1 595 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 OR4F4Q96R69 305 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 APOOQ9BUR5 198 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 BET1LQ9NYM9 111 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 MRPL27Q9P0M9 148 aaKnown RBP8.23□□□□□ -1.09
SF3A3-201ENST00000373019 CCL26Q9Y258 94 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 REV3LO60673 3130 aa8.23□□□□□ -1.09
SF3A3-201ENST00000373019 A0A1W2PRS3 328 aa8.22□□□□□ -1.09
SF3A3-201ENST00000373019 PHF1O43189 567 aaPredicted RBP8.22□□□□□ -1.09
SF3A3-201ENST00000373019 B3GALT2O43825 422 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms