RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 MS4A18Q3C1V0 323 aa12.43□□□□□ -0.42
RAPGEF1-202ENST00000372190 BEX4Q9NWD9 120 aaPredicted RBP12.43□□□□□ -0.42
RAPGEF1-202ENST00000372190 TCFL5Q9UL49 500 aa12.43□□□□□ -0.42
RAPGEF1-202ENST00000372190 IGHV5-10-1A0A0J9YXX1 117 aa12.43□□□□□ -0.42
RAPGEF1-202ENST00000372190 P2RY1P47900 373 aa12.43□□□□□ -0.42
RAPGEF1-202ENST00000372190 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.43□□□□□ -0.42
RAPGEF1-202ENST00000372190 MOB4Q9Y3A3 225 aa12.43□□□□□ -0.42
RAPGEF1-202ENST00000372190 C5orf49A4QMS7 147 aa12.43□□□□□ -0.42
RAPGEF1-202ENST00000372190 ICAM5Q9UMF0 924 aa12.43□□□□□ -0.42
RAPGEF1-202ENST00000372190 ADAM20O43506 726 aa12.42□□□□□ -0.42
RAPGEF1-202ENST00000372190 RBP4P02753 201 aa12.42□□□□□ -0.42
RAPGEF1-202ENST00000372190 EMDP50402 254 aa12.42□□□□□ -0.42
RAPGEF1-202ENST00000372190 OR52N5Q8NH56 324 aa12.42□□□□□ -0.42
RAPGEF1-202ENST00000372190 ZNF815PA8K554 130 aa12.42□□□□□ -0.42
RAPGEF1-202ENST00000372190 C1orf185Q5T7R7 199 aa12.42□□□□□ -0.42
RAPGEF1-202ENST00000372190 FNDC7Q5VTL7 733 aa12.42□□□□□ -0.42
RAPGEF1-202ENST00000372190 OR8I2Q8N0Y5 310 aa12.42□□□□□ -0.42
RAPGEF1-202ENST00000372190 SRSF10O75494 262 aaKnown RBP12.42□□□□□ -0.42
RAPGEF1-202ENST00000372190 GOSR1O95249 250 aa12.42□□□□□ -0.42
RAPGEF1-202ENST00000372190 SBK3P0C264 359 aa12.42□□□□□ -0.42
RAPGEF1-202ENST00000372190 EMC4Q5J8M3 183 aa12.42□□□□□ -0.42
RAPGEF1-202ENST00000372190 OR8G5Q8NG78 346 aa12.42□□□□□ -0.42
RAPGEF1-202ENST00000372190 FGF20Q9NP95 211 aaPredicted RBP12.42□□□□□ -0.42
RAPGEF1-202ENST00000372190 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.42□□□□□ -0.42
RAPGEF1-202ENST00000372190 FAM157BP0CG42 384 aa12.42□□□□□ -0.42
RAPGEF1-202ENST00000372190 GAGE2BQ13066 116 aa12.42□□□□□ -0.42
RAPGEF1-202ENST00000372190 GAGE2EQ4V326 116 aa12.42□□□□□ -0.42
RAPGEF1-202ENST00000372190 C19orf54Q5BKX5 351 aa12.42□□□□□ -0.42
RAPGEF1-202ENST00000372190 OR51E1Q8TCB6 317 aa12.42□□□□□ -0.42
RAPGEF1-202ENST00000372190 FGF11Q92914 225 aa12.42□□□□□ -0.42
RAPGEF1-202ENST00000372190 PERPQ96FX8 193 aa12.42□□□□□ -0.42
RAPGEF1-202ENST00000372190 RSPO3Q9BXY4 272 aaPredicted RBP12.42□□□□□ -0.42
RAPGEF1-202ENST00000372190 CLEC5AQ9NY25 188 aa12.42□□□□□ -0.42
RAPGEF1-202ENST00000372190 GAGE2DQ9UEU5 116 aa12.42□□□□□ -0.42
RAPGEF1-202ENST00000372190 STARD10Q9Y365 291 aa12.42□□□□□ -0.42
RAPGEF1-202ENST00000372190 IGLV3-16A0A075B6K0 115 aa12.42□□□□□ -0.42
RAPGEF1-202ENST00000372190 CTSVO60911 334 aa12.42□□□□□ -0.42
RAPGEF1-202ENST00000372190 WNT1P04628 370 aa12.42□□□□□ -0.42
RAPGEF1-202ENST00000372190 PPP1CAP62136 330 aa12.42□□□□□ -0.42
RAPGEF1-202ENST00000372190 PPP1R1AQ13522 171 aa12.42□□□□□ -0.42
RAPGEF1-202ENST00000372190 CDK5R1Q15078 307 aa12.42□□□□□ -0.42
RAPGEF1-202ENST00000372190 KHDC1LQ5JSQ8 128 aa12.42□□□□□ -0.42
RAPGEF1-202ENST00000372190 SLC17A5Q9NRA2 495 aa12.42□□□□□ -0.42
RAPGEF1-202ENST00000372190 HDGFL3Q9Y3E1 203 aa12.42□□□□□ -0.42
RAPGEF1-202ENST00000372190 ETHE1O95571 254 aa12.41□□□□□ -0.42
RAPGEF1-202ENST00000372190 PTOV1Q86YD1 416 aa12.41□□□□□ -0.42
RAPGEF1-202ENST00000372190 ELOVL5Q9NYP7 299 aa12.41□□□□□ -0.42
RAPGEF1-202ENST00000372190 GCSAMLQ5JQS6 135 aa12.41□□□□□ -0.42
RAPGEF1-202ENST00000372190 NHLRC1Q6VVB1 395 aa12.41□□□□□ -0.42
RAPGEF1-202ENST00000372190 NEUROG1Q92886 237 aa12.41□□□□□ -0.42
RAPGEF1-202ENST00000372190 NUMA1Q14980 2115 aa12.41□□□□□ -0.42
RAPGEF1-202ENST00000372190 PRSS2P07478 247 aa12.41□□□□□ -0.42
RAPGEF1-202ENST00000372190 MGPP08493 103 aa12.41□□□□□ -0.42
RAPGEF1-202ENST00000372190 BHLHA15Q7RTS1 189 aaPredicted RBP12.41□□□□□ -0.42
RAPGEF1-202ENST00000372190 TRIP12Q14669 1992 aaPredicted RBP12.41□□□□□ -0.42
RAPGEF1-202ENST00000372190 TMPRSS3P57727 454 aa12.41□□□□□ -0.42
RAPGEF1-202ENST00000372190 SHBQ15464 509 aa12.41□□□□□ -0.42
RAPGEF1-202ENST00000372190 NKG7Q16617 165 aa12.41□□□□□ -0.42
RAPGEF1-202ENST00000372190 HDHD3Q9BSH5 251 aaPredicted RBP12.41□□□□□ -0.42
RAPGEF1-202ENST00000372190 CES1P1Q9UKY3 287 aa12.41□□□□□ -0.42
RAPGEF1-202ENST00000372190 LOC389332A0A1B0GUA5 103 aa12.41□□□□□ -0.42
RAPGEF1-202ENST00000372190 FGF2P09038 288 aa12.41□□□□□ -0.42
RAPGEF1-202ENST00000372190 LIAT1Q6ZQX7 453 aa12.41□□□□□ -0.42
RAPGEF1-202ENST00000372190 RHNO1Q9BSD3 238 aa12.41□□□□□ -0.42
RAPGEF1-202ENST00000372190 SEMG1P04279 462 aa12.4□□□□□ -0.42
RAPGEF1-202ENST00000372190 SLIRPQ9GZT3 109 aaKnown RBP12.4□□□□□ -0.42
RAPGEF1-202ENST00000372190 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.4□□□□□ -0.42
RAPGEF1-202ENST00000372190 GUCA2AQ02747 115 aa12.4□□□□□ -0.42
RAPGEF1-202ENST00000372190 PRICKLE4Q2TBC4 344 aa12.4□□□□□ -0.42
RAPGEF1-202ENST00000372190 HFEQ30201 348 aa12.4□□□□□ -0.42
RAPGEF1-202ENST00000372190 FBLN7Q53RD9 439 aa12.4□□□□□ -0.42
RAPGEF1-202ENST00000372190 SLC35E3Q7Z769 313 aa12.4□□□□□ -0.42
RAPGEF1-202ENST00000372190 RCC2Q9P258 522 aaKnown RBP12.4□□□□□ -0.42
RAPGEF1-202ENST00000372190 TRAV8-4A0A0B4J246 113 aa12.4□□□□□ -0.42
RAPGEF1-202ENST00000372190 MMP9P14780 707 aa12.4□□□□□ -0.42
RAPGEF1-202ENST00000372190 OPRK1P41145 380 aa12.4□□□□□ -0.42
RAPGEF1-202ENST00000372190 SOX8P57073 446 aa12.4□□□□□ -0.42
RAPGEF1-202ENST00000372190 LINC01555Q8NAE3 123 aa12.4□□□□□ -0.42
RAPGEF1-202ENST00000372190 RBKSQ9H477 322 aa12.4□□□□□ -0.42
RAPGEF1-202ENST00000372190 ZNF346Q9UL40 294 aaKnown RBP12.4□□□□□ -0.42
RAPGEF1-202ENST00000372190 ZDHHC8Q9ULC8 765 aa12.4□□□□□ -0.42
RAPGEF1-202ENST00000372190 KBTBD11O94819 623 aa12.4□□□□□ -0.42
RAPGEF1-202ENST00000372190 DYNLT3P51808 116 aa12.4□□□□□ -0.42
RAPGEF1-202ENST00000372190 RGS7BPQ6MZT1 257 aaPredicted RBP12.4□□□□□ -0.42
RAPGEF1-202ENST00000372190 RNF165Q6ZSG1 346 aa12.4□□□□□ -0.42
RAPGEF1-202ENST00000372190 ISG20L2Q9H9L3 353 aaKnown RBP12.4□□□□□ -0.42
RAPGEF1-202ENST00000372190 PGPEP1Q9NXJ5 209 aa12.4□□□□□ -0.42
RAPGEF1-202ENST00000372190 NPIPB8E9PQR5 432 aa12.39□□□□□ -0.43
RAPGEF1-202ENST00000372190 NPIPB9F8W1W9 429 aa12.39□□□□□ -0.43
RAPGEF1-202ENST00000372190 NPIPB7O75200 414 aa12.39□□□□□ -0.43
RAPGEF1-202ENST00000372190 ZNF137PP52743 207 aa12.39□□□□□ -0.43
RAPGEF1-202ENST00000372190 HERPUD1Q15011 391 aa12.39□□□□□ -0.43
RAPGEF1-202ENST00000372190 ISXQ2M1V0 245 aa12.39□□□□□ -0.43
RAPGEF1-202ENST00000372190 WDR25Q64LD2 544 aaPredicted RBP12.39□□□□□ -0.43
RAPGEF1-202ENST00000372190 SGMS2Q8NHU3 365 aa12.39□□□□□ -0.43
RAPGEF1-202ENST00000372190 RDH5Q92781 318 aa12.39□□□□□ -0.43
RAPGEF1-202ENST00000372190 TNFRSF14Q92956 283 aa12.39□□□□□ -0.43
RAPGEF1-202ENST00000372190 NPTNQ9Y639 398 aa12.39□□□□□ -0.43
RAPGEF1-202ENST00000372190 SLC17A2O00624 439 aa12.39□□□□□ -0.43
RAPGEF1-202ENST00000372190 AGFG2O95081 481 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms