RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 MRPL18Q9H0U6 180 aaKnown RBP10.3□□□□□ -0.76
PTPN1-201ENST00000371621 MYOZ1Q9NP98 299 aaPredicted RBP10.3□□□□□ -0.76
PTPN1-201ENST00000371621 TRAPPC2LQ9UL33 140 aa10.3□□□□□ -0.76
PTPN1-201ENST00000371621 H0YIG0 161 aa10.3□□□□□ -0.76
PTPN1-201ENST00000371621 CTSVO60911 334 aa10.3□□□□□ -0.76
PTPN1-201ENST00000371621 HOXA6P31267 233 aa10.3□□□□□ -0.76
PTPN1-201ENST00000371621 HHEXQ03014 270 aa10.3□□□□□ -0.76
PTPN1-201ENST00000371621 GGTLC2Q14390 218 aa10.3□□□□□ -0.76
PTPN1-201ENST00000371621 TMEM251Q8N6I4 163 aa10.3□□□□□ -0.76
PTPN1-201ENST00000371621 OR10V1Q8NGI7 309 aa10.3□□□□□ -0.76
PTPN1-201ENST00000371621 CES1P1Q9UKY3 287 aa10.3□□□□□ -0.76
PTPN1-201ENST00000371621 SPTBN2O15020 2390 aa10.3□□□□□ -0.76
PTPN1-201ENST00000371621 LOC101059948A0A1B0GTJ6 334 aa10.3□□□□□ -0.76
PTPN1-201ENST00000371621 C4orf51C9J302 202 aa10.3□□□□□ -0.76
PTPN1-201ENST00000371621 MPPED1O15442 326 aa10.3□□□□□ -0.76
PTPN1-201ENST00000371621 MELTFP08582 738 aa10.3□□□□□ -0.76
PTPN1-201ENST00000371621 BLKP51451 505 aa10.3□□□□□ -0.76
PTPN1-201ENST00000371621 ZNF77Q15935 545 aa10.3□□□□□ -0.76
PTPN1-201ENST00000371621 WFDC8Q8IUA0 241 aa10.3□□□□□ -0.76
PTPN1-201ENST00000371621 SDF2L1Q9HCN8 221 aa10.3□□□□□ -0.76
PTPN1-201ENST00000371621 FGF22Q9HCT0 170 aa10.3□□□□□ -0.76
PTPN1-201ENST00000371621 TBL2Q9Y4P3 447 aaKnown RBP10.3□□□□□ -0.76
PTPN1-201ENST00000371621 DOCK10Q96BY6 2186 aa10.29□□□□□ -0.76
PTPN1-201ENST00000371621 PGPEP1LA6NFU8 196 aa10.29□□□□□ -0.76
PTPN1-201ENST00000371621 SEMA4FO95754 770 aa10.29□□□□□ -0.76
PTPN1-201ENST00000371621 TNFP01375 233 aa10.29□□□□□ -0.76
PTPN1-201ENST00000371621 HLA-GP17693 338 aa10.29□□□□□ -0.76
PTPN1-201ENST00000371621 ZNF506Q5JVG8 444 aa10.29□□□□□ -0.76
PTPN1-201ENST00000371621 OR52L2PQ8NGH6 319 aa10.29□□□□□ -0.76
PTPN1-201ENST00000371621 PLPPR2Q96GM1 343 aa10.29□□□□□ -0.76
PTPN1-201ENST00000371621 DOCK6Q96HP0 2047 aa10.29□□□□□ -0.76
PTPN1-201ENST00000371621 IGSF23A1L1A6 192 aa10.29□□□□□ -0.76
PTPN1-201ENST00000371621 HSPB2A8KAH6 182 aa10.29□□□□□ -0.76
PTPN1-201ENST00000371621 BCAT2O15382 392 aaPredicted RBP10.29□□□□□ -0.76
PTPN1-201ENST00000371621 HAND1O96004 215 aa10.29□□□□□ -0.76
PTPN1-201ENST00000371621 UMODP07911 640 aa10.29□□□□□ -0.76
PTPN1-201ENST00000371621 HOXB2P14652 356 aa10.29□□□□□ -0.76
PTPN1-201ENST00000371621 HSPB2Q16082 182 aa10.29□□□□□ -0.76
PTPN1-201ENST00000371621 AMMECR1LQ6DCA0 310 aa10.29□□□□□ -0.76
PTPN1-201ENST00000371621 VN1R4Q7Z5H5 301 aa10.29□□□□□ -0.76
PTPN1-201ENST00000371621 DEFB119Q8N690 84 aa10.29□□□□□ -0.76
PTPN1-201ENST00000371621 MRGPRX3Q96LB0 322 aa10.29□□□□□ -0.76
PTPN1-201ENST00000371621 POLEQ07864 2286 aa10.29□□□□□ -0.76
PTPN1-201ENST00000371621 A0A1W2PRS3 328 aa10.29□□□□□ -0.76
PTPN1-201ENST00000371621 H0Y8X5 98 aa10.29□□□□□ -0.76
PTPN1-201ENST00000371621 NKX2-2O95096 273 aa10.29□□□□□ -0.76
PTPN1-201ENST00000371621 PSG1P11464 419 aa10.29□□□□□ -0.76
PTPN1-201ENST00000371621 RELBQ01201 579 aa10.29□□□□□ -0.76
PTPN1-201ENST00000371621 UBE2V1Q13404 147 aa10.29□□□□□ -0.76
PTPN1-201ENST00000371621 GAPTQ8N292 157 aa10.29□□□□□ -0.76
PTPN1-201ENST00000371621 CLDND2Q8NHS1 167 aa10.29□□□□□ -0.76
PTPN1-201ENST00000371621 GSX1Q9H4S2 264 aaPredicted RBP10.29□□□□□ -0.76
PTPN1-201ENST00000371621 INTS1Q8N201 2190 aaKnown RBP10.28□□□□□ -0.76
PTPN1-201ENST00000371621 GOSR1O95249 250 aa10.28□□□□□ -0.76
PTPN1-201ENST00000371621 CD1AP06126 327 aa10.28□□□□□ -0.76
PTPN1-201ENST00000371621 RSPO4Q2I0M5 234 aaPredicted RBP10.28□□□□□ -0.76
PTPN1-201ENST00000371621 OR8I2Q8N0Y5 310 aa10.28□□□□□ -0.76
PTPN1-201ENST00000371621 RCC1LQ96I51 464 aaKnown RBP10.28□□□□□ -0.76
PTPN1-201ENST00000371621 TIMM29Q9BSF4 260 aa10.28□□□□□ -0.76
PTPN1-201ENST00000371621 ULBP2Q9BZM5 246 aa10.28□□□□□ -0.76
PTPN1-201ENST00000371621 OR2D2Q9H210 308 aa10.28□□□□□ -0.76
PTPN1-201ENST00000371621 IGHV3-20A0A0C4DH32 117 aa10.28□□□□□ -0.76
PTPN1-201ENST00000371621 A0A0J9YY10 115 aa10.28□□□□□ -0.76
PTPN1-201ENST00000371621 PRSS38A1L453 326 aa10.28□□□□□ -0.76
PTPN1-201ENST00000371621 TRAPPC2LH3BP13 241 aa10.28□□□□□ -0.76
PTPN1-201ENST00000371621 TOX3O15405 576 aaPredicted RBP10.28□□□□□ -0.76
PTPN1-201ENST00000371621 TCN2P20062 427 aa10.28□□□□□ -0.76
PTPN1-201ENST00000371621 ZNF816Q0VGE8 651 aaPredicted RBP10.28□□□□□ -0.76
PTPN1-201ENST00000371621 SAMD13Q5VXD3 122 aa10.28□□□□□ -0.76
PTPN1-201ENST00000371621 LIPHQ8WWY8 451 aa10.28□□□□□ -0.76
PTPN1-201ENST00000371621 ALKBH4Q9NXW9 302 aa10.28□□□□□ -0.76
PTPN1-201ENST00000371621 SCGB2A1O75556 95 aa10.28□□□□□ -0.76
PTPN1-201ENST00000371621 DCAF7P61962 342 aa10.28□□□□□ -0.76
PTPN1-201ENST00000371621 TMEM52Q8NDY8 209 aa10.28□□□□□ -0.76
PTPN1-201ENST00000371621 Q8NFD4 153 aa10.28□□□□□ -0.76
PTPN1-201ENST00000371621 OR2T6Q8NHC8 308 aa10.28□□□□□ -0.76
PTPN1-201ENST00000371621 BMFQ96LC9 184 aa10.28□□□□□ -0.76
PTPN1-201ENST00000371621 TUBD1Q9UJT1 453 aa10.28□□□□□ -0.76
PTPN1-201ENST00000371621 ODAMA1E959 279 aa10.27□□□□□ -0.76
PTPN1-201ENST00000371621 ZNF891A8MT65 544 aaPredicted RBP10.27□□□□□ -0.76
PTPN1-201ENST00000371621 TNFSF13O75888 250 aa10.27□□□□□ -0.76
PTPN1-201ENST00000371621 MT-ATP6P00846 226 aa10.27□□□□□ -0.76
PTPN1-201ENST00000371621 VDAC1P21796 283 aa10.27□□□□□ -0.76
PTPN1-201ENST00000371621 PI4KAP42356 2102 aa10.27□□□□□ -0.76
PTPN1-201ENST00000371621 PPOXP50336 477 aa10.27□□□□□ -0.76
PTPN1-201ENST00000371621 TMEM50BP56557 158 aa10.27□□□□□ -0.76
PTPN1-201ENST00000371621 INSM1Q01101 510 aaPredicted RBP10.27□□□□□ -0.76
PTPN1-201ENST00000371621 SHHQ15465 462 aa10.27□□□□□ -0.76
PTPN1-201ENST00000371621 PRICKLE4Q2TBC4 344 aa10.27□□□□□ -0.76
PTPN1-201ENST00000371621 SNAI3Q3KNW1 292 aa10.27□□□□□ -0.76
PTPN1-201ENST00000371621 SSX8Q7RTT4 187 aa10.27□□□□□ -0.76
PTPN1-201ENST00000371621 KMT5CQ86Y97 462 aa10.27□□□□□ -0.76
PTPN1-201ENST00000371621 GCNT2Q8N0V5 402 aa10.27□□□□□ -0.76
PTPN1-201ENST00000371621 LRRC75AQ8NAA5 344 aa10.27□□□□□ -0.76
PTPN1-201ENST00000371621 ABHD3Q8WU67 409 aa10.27□□□□□ -0.76
PTPN1-201ENST00000371621 DAZAP1Q96EP5 407 aaKnown RBP10.27□□□□□ -0.76
PTPN1-201ENST00000371621 CCL28Q9NRJ3 127 aa10.27□□□□□ -0.76
PTPN1-201ENST00000371621 ARID2Q68CP9 1835 aa10.27□□□□□ -0.77
PTPN1-201ENST00000371621 A0A1B0GV72 72 aa10.27□□□□□ -0.77
PTPN1-201ENST00000371621 SHISA7A6NL88 538 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms