RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 ADIRFQ15847 76 aa9.99□□□□□ -0.81
SMARCA1-201ENST00000371121 IQCJQ1A5X6 159 aa9.99□□□□□ -0.81
SMARCA1-201ENST00000371121 TEX43Q6ZNM6 134 aa9.99□□□□□ -0.81
SMARCA1-201ENST00000371121 PRSS58Q8IYP2 241 aa9.99□□□□□ -0.81
SMARCA1-201ENST00000371121 BATF2Q8N1L9 274 aa9.99□□□□□ -0.81
SMARCA1-201ENST00000371121 OR1N1Q8NGS0 311 aa9.99□□□□□ -0.81
SMARCA1-201ENST00000371121 SNIP1Q8TAD8 396 aaKnown RBP9.99□□□□□ -0.81
SMARCA1-201ENST00000371121 DTD1Q8TEA8 209 aa9.99□□□□□ -0.81
SMARCA1-201ENST00000371121 PRSS50Q9UI38 385 aa9.99□□□□□ -0.81
SMARCA1-201ENST00000371121 CBY1Q9Y3M2 126 aa9.99□□□□□ -0.81
SMARCA1-201ENST00000371121 A0A1W2PNR3 127 aa9.99□□□□□ -0.81
SMARCA1-201ENST00000371121 IGKV1-39P01597 117 aa9.99□□□□□ -0.81
SMARCA1-201ENST00000371121 IGKV1D-39P04432 117 aa9.99□□□□□ -0.81
SMARCA1-201ENST00000371121 GAPTQ8N292 157 aa9.99□□□□□ -0.81
SMARCA1-201ENST00000371121 ARL6IP6Q8N6S5 226 aa9.99□□□□□ -0.81
SMARCA1-201ENST00000371121 RNF138Q8WVD3 245 aa9.99□□□□□ -0.81
SMARCA1-201ENST00000371121 SDSLQ96GA7 329 aa9.99□□□□□ -0.81
SMARCA1-201ENST00000371121 WNT5BQ9H1J7 359 aa9.99□□□□□ -0.81
SMARCA1-201ENST00000371121 ZNF407Q9C0G0 2248 aa9.99□□□□□ -0.81
SMARCA1-201ENST00000371121 IGHV3-20A0A0C4DH32 117 aa9.99□□□□□ -0.81
SMARCA1-201ENST00000371121 IGLV2-14P01704 120 aa9.99□□□□□ -0.81
SMARCA1-201ENST00000371121 CST2P09228 141 aa9.99□□□□□ -0.81
SMARCA1-201ENST00000371121 TNFSF10P50591 281 aa9.99□□□□□ -0.81
SMARCA1-201ENST00000371121 FAM3BP58499 235 aaPredicted RBP9.99□□□□□ -0.81
SMARCA1-201ENST00000371121 HIST1H3AP68431 136 aa9.99□□□□□ -0.81
SMARCA1-201ENST00000371121 ALKBH4Q9NXW9 302 aa9.99□□□□□ -0.81
SMARCA1-201ENST00000371121 MUC3AQ02505 3323 aa9.98□□□□□ -0.81
SMARCA1-201ENST00000371121 DCHS1Q96JQ0 3298 aa9.98□□□□□ -0.81
SMARCA1-201ENST00000371121 A0A1W2PPQ1 181 aa9.98□□□□□ -0.81
SMARCA1-201ENST00000371121 KBTBD11O94819 623 aa9.98□□□□□ -0.81
SMARCA1-201ENST00000371121 HRASP01112 189 aa9.98□□□□□ -0.81
SMARCA1-201ENST00000371121 TUBG1P23258 451 aa9.98□□□□□ -0.81
SMARCA1-201ENST00000371121 PRDX4Q13162 271 aa9.98□□□□□ -0.81
SMARCA1-201ENST00000371121 ZNF525Q8N782 197 aa9.98□□□□□ -0.81
SMARCA1-201ENST00000371121 MRGPRX1Q96LB2 322 aa9.98□□□□□ -0.81
SMARCA1-201ENST00000371121 NAT8Q9UHE5 227 aa9.98□□□□□ -0.81
SMARCA1-201ENST00000371121 WDFY4Q6ZS81 3184 aa9.98□□□□□ -0.81
SMARCA1-201ENST00000371121 CCDC85CA6NKD9 419 aa9.98□□□□□ -0.81
SMARCA1-201ENST00000371121 F2Z2F3 143 aa9.98□□□□□ -0.81
SMARCA1-201ENST00000371121 F5H5K5 113 aa9.98□□□□□ -0.81
SMARCA1-201ENST00000371121 DEFA4P12838 97 aa9.98□□□□□ -0.81
SMARCA1-201ENST00000371121 UCP1P25874 307 aa9.98□□□□□ -0.81
SMARCA1-201ENST00000371121 IL3RAP26951 378 aa9.98□□□□□ -0.81
SMARCA1-201ENST00000371121 SOX8P57073 446 aa9.98□□□□□ -0.81
SMARCA1-201ENST00000371121 CLRN1P58418 232 aa9.98□□□□□ -0.81
SMARCA1-201ENST00000371121 FOXL2NBQ6ZUU3 175 aa9.98□□□□□ -0.81
SMARCA1-201ENST00000371121 MRPL41Q8IXM3 137 aaKnown RBP9.98□□□□□ -0.81
SMARCA1-201ENST00000371121 PP6455Q8WZ26 134 aa9.98□□□□□ -0.81
SMARCA1-201ENST00000371121 PARLQ9H300 379 aa9.98□□□□□ -0.81
SMARCA1-201ENST00000371121 ASCL3Q9NQ33 180 aa9.98□□□□□ -0.81
SMARCA1-201ENST00000371121 DOCK11Q5JSL3 2073 aa9.98□□□□□ -0.81
SMARCA1-201ENST00000371121 CEBPZOSA8MTT3 80 aa9.98□□□□□ -0.81
SMARCA1-201ENST00000371121 HBE1P02100 147 aa9.98□□□□□ -0.81
SMARCA1-201ENST00000371121 COL8A2P25067 703 aa9.98□□□□□ -0.81
SMARCA1-201ENST00000371121 FAM189A2Q15884 450 aa9.98□□□□□ -0.81
SMARCA1-201ENST00000371121 ZNF468Q5VIY5 522 aaPredicted RBP9.98□□□□□ -0.81
SMARCA1-201ENST00000371121 TCF23Q7RTU1 214 aa9.98□□□□□ -0.81
SMARCA1-201ENST00000371121 OR5P3Q8WZ94 311 aa9.98□□□□□ -0.81
SMARCA1-201ENST00000371121 TMEM18Q96B42 140 aa9.98□□□□□ -0.81
SMARCA1-201ENST00000371121 RBM24Q9BX46 236 aaKnown RBP9.98□□□□□ -0.81
SMARCA1-201ENST00000371121 F5P12259 2224 aa9.98□□□□□ -0.81
SMARCA1-201ENST00000371121 SLC22A20A6NK97 555 aa9.97□□□□□ -0.81
SMARCA1-201ENST00000371121 IGHV4-34P06331 123 aa9.97□□□□□ -0.81
SMARCA1-201ENST00000371121 FRMD6-AS1P0C7T7 363 aa9.97□□□□□ -0.81
SMARCA1-201ENST00000371121 IL24Q13007 206 aa9.97□□□□□ -0.81
SMARCA1-201ENST00000371121 SSPNQ14714 243 aa9.97□□□□□ -0.81
SMARCA1-201ENST00000371121 PLPPR5Q32ZL2 321 aa9.97□□□□□ -0.81
SMARCA1-201ENST00000371121 BSXQ3C1V8 233 aa9.97□□□□□ -0.81
SMARCA1-201ENST00000371121 CAPNS2Q96L46 248 aa9.97□□□□□ -0.81
SMARCA1-201ENST00000371121 TBX15Q96SF7 602 aa9.97□□□□□ -0.81
SMARCA1-201ENST00000371121 C20orf144Q9BQM9 153 aa9.97□□□□□ -0.81
SMARCA1-201ENST00000371121 PTRH2Q9Y3E5 179 aaKnown RBP9.97□□□□□ -0.81
SMARCA1-201ENST00000371121 KIR2DS5A0A0G2JLQ3 304 aa9.97□□□□□ -0.81
SMARCA1-201ENST00000371121 A0A0G2JNG1 304 aa9.97□□□□□ -0.81
SMARCA1-201ENST00000371121 A0A1W2PR80 420 aa9.97□□□□□ -0.81
SMARCA1-201ENST00000371121 KIR2DS3K7RE56 304 aa9.97□□□□□ -0.81
SMARCA1-201ENST00000371121 HMGB3O15347 200 aaKnown RBP9.97□□□□□ -0.81
SMARCA1-201ENST00000371121 MLNRO43193 412 aa9.97□□□□□ -0.81
SMARCA1-201ENST00000371121 HSPA12AO43301 675 aa9.97□□□□□ -0.81
SMARCA1-201ENST00000371121 SCGB1D1O95968 90 aa9.97□□□□□ -0.81
SMARCA1-201ENST00000371121 SCTP09683 121 aa9.97□□□□□ -0.81
SMARCA1-201ENST00000371121 CNN1P51911 297 aaKnown RBP9.97□□□□□ -0.81
SMARCA1-201ENST00000371121 PTTG1IPP53801 180 aa9.97□□□□□ -0.81
SMARCA1-201ENST00000371121 KIR2DS5Q14953 304 aa9.97□□□□□ -0.81
SMARCA1-201ENST00000371121 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.97□□□□□ -0.81
SMARCA1-201ENST00000371121 ZNF114Q8NC26 417 aa9.97□□□□□ -0.81
SMARCA1-201ENST00000371121 ZCCHC14Q8WYQ9 949 aaKnown RBP9.97□□□□□ -0.81
SMARCA1-201ENST00000371121 ST8SIA1Q92185 356 aa9.97□□□□□ -0.81
SMARCA1-201ENST00000371121 PGAM5Q96HS1 289 aa9.97□□□□□ -0.81
SMARCA1-201ENST00000371121 SMIM7Q9BQ49 75 aa9.97□□□□□ -0.81
SMARCA1-201ENST00000371121 PLSCR2Q9NRY7 297 aa9.97□□□□□ -0.81
SMARCA1-201ENST00000371121 GPR27Q9NS67 375 aa9.97□□□□□ -0.81
SMARCA1-201ENST00000371121 PXMP4Q9Y6I8 212 aa9.97□□□□□ -0.81
SMARCA1-201ENST00000371121 C1QTNF9BB2RNN3 333 aa9.96□□□□□ -0.81
SMARCA1-201ENST00000371121 PPP5D1E7EU14 171 aa9.96□□□□□ -0.81
SMARCA1-201ENST00000371121 C3orf80F5H4A9 247 aa9.96□□□□□ -0.81
SMARCA1-201ENST00000371121 UMODP07911 640 aa9.96□□□□□ -0.81
SMARCA1-201ENST00000371121 CCKARP32238 428 aa9.96□□□□□ -0.81
SMARCA1-201ENST00000371121 CAPZBP47756 277 aa9.96□□□□□ -0.81
SMARCA1-201ENST00000371121 MRPS34P82930 218 aaKnown RBP9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms