RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 HRKO00198 91 aa11.15□□□□□ -0.63
GPC4-201ENST00000370828 UPK3AO75631 287 aa11.15□□□□□ -0.63
GPC4-201ENST00000370828 SPINK2P20155 84 aa11.15□□□□□ -0.63
GPC4-201ENST00000370828 CEACAM6P40199 344 aa11.15□□□□□ -0.63
GPC4-201ENST00000370828 INSM1Q01101 510 aaPredicted RBP11.15□□□□□ -0.63
GPC4-201ENST00000370828 EIF4EBP2Q13542 120 aaPredicted RBP11.15□□□□□ -0.63
GPC4-201ENST00000370828 FAM53BQ14153 422 aa11.15□□□□□ -0.63
GPC4-201ENST00000370828 TMEM183AQ8IXX5 376 aa11.15□□□□□ -0.63
GPC4-201ENST00000370828 FGF14Q92915 247 aa11.15□□□□□ -0.63
GPC4-201ENST00000370828 TAAR6Q96RI8 345 aa11.15□□□□□ -0.63
GPC4-201ENST00000370828 C5orf66Q9H5L9 145 aa11.15□□□□□ -0.63
GPC4-201ENST00000370828 HES4Q9HCC6 221 aa11.15□□□□□ -0.63
GPC4-201ENST00000370828 H0YIG0 161 aa11.14□□□□□ -0.63
GPC4-201ENST00000370828 CXCL13O43927 109 aa11.14□□□□□ -0.63
GPC4-201ENST00000370828 ASCL4Q6XD76 172 aa11.14□□□□□ -0.63
GPC4-201ENST00000370828 LSRQ86X29 649 aaPredicted RBP11.14□□□□□ -0.63
GPC4-201ENST00000370828 OR10V1Q8NGI7 309 aa11.14□□□□□ -0.63
GPC4-201ENST00000370828 IFITM10A6NMD0 228 aa11.14□□□□□ -0.63
GPC4-201ENST00000370828 BRS3P32247 399 aa11.14□□□□□ -0.63
GPC4-201ENST00000370828 G6PCP35575 357 aa11.14□□□□□ -0.63
GPC4-201ENST00000370828 OR10G3Q8NGC4 313 aa11.14□□□□□ -0.63
GPC4-201ENST00000370828 OR1F12Q8NHA8 337 aa11.14□□□□□ -0.63
GPC4-201ENST00000370828 CDC42EP3Q9UKI2 254 aa11.14□□□□□ -0.63
GPC4-201ENST00000370828 TMEM50BP56557 158 aa11.14□□□□□ -0.63
GPC4-201ENST00000370828 PRSS3P2Q8NHM4 247 aa11.14□□□□□ -0.63
GPC4-201ENST00000370828 PTPMT1Q8WUK0 201 aaPredicted RBP11.14□□□□□ -0.63
GPC4-201ENST00000370828 PTX4Q96A99 478 aa11.14□□□□□ -0.63
GPC4-201ENST00000370828 GALMQ96C23 342 aa11.14□□□□□ -0.63
GPC4-201ENST00000370828 MRPL13Q9BYD1 178 aaKnown RBP11.14□□□□□ -0.63
GPC4-201ENST00000370828 FAM186AA6NE01 2351 aa11.14□□□□□ -0.63
GPC4-201ENST00000370828 TMEM265A0A087WTH1 108 aa11.14□□□□□ -0.63
GPC4-201ENST00000370828 LMX1BO60663 402 aa11.14□□□□□ -0.63
GPC4-201ENST00000370828 DUSP3P51452 185 aaPredicted RBP11.14□□□□□ -0.63
GPC4-201ENST00000370828 RBM11P57052 281 aaKnown RBP11.14□□□□□ -0.63
GPC4-201ENST00000370828 C16orf47Q6ZP98 133 aaPredicted RBP11.14□□□□□ -0.63
GPC4-201ENST00000370828 TEX29Q8N6K0 151 aa11.14□□□□□ -0.63
GPC4-201ENST00000370828 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.14□□□□□ -0.63
GPC4-201ENST00000370828 S1PR3Q99500 378 aa11.14□□□□□ -0.63
GPC4-201ENST00000370828 GINS3Q9BRX5 216 aa11.14□□□□□ -0.63
GPC4-201ENST00000370828 GRIFINA4D1Z8 144 aa11.13□□□□□ -0.63
GPC4-201ENST00000370828 COX7A2P2O60397 106 aa11.13□□□□□ -0.63
GPC4-201ENST00000370828 GOSR1O95249 250 aa11.13□□□□□ -0.63
GPC4-201ENST00000370828 FKBP2P26885 142 aaKnown RBP11.13□□□□□ -0.63
GPC4-201ENST00000370828 CEACAM16Q2WEN9 425 aa11.13□□□□□ -0.63
GPC4-201ENST00000370828 TRAT1Q6PIZ9 186 aa11.13□□□□□ -0.63
GPC4-201ENST00000370828 MOB3AQ96BX8 217 aa11.13□□□□□ -0.63
GPC4-201ENST00000370828 TECRQ9NZ01 308 aaKnown RBP11.13□□□□□ -0.63
GPC4-201ENST00000370828 CACNA1DQ01668 2161 aa11.13□□□□□ -0.63
GPC4-201ENST00000370828 FOCADQ5VW36 1801 aa11.13□□□□□ -0.63
GPC4-201ENST00000370828 HPRT1P00492 218 aa11.13□□□□□ -0.63
GPC4-201ENST00000370828 RPS23P62266 143 aaKnown RBP11.13□□□□□ -0.63
GPC4-201ENST00000370828 SVIPQ8NHG7 77 aa11.13□□□□□ -0.63
GPC4-201ENST00000370828 SNRPCP09234 159 aaKnown RBP11.13□□□□□ -0.63
GPC4-201ENST00000370828 PATE4P0C8F1 98 aa11.13□□□□□ -0.63
GPC4-201ENST00000370828 ZNF774Q6NX45 483 aa11.13□□□□□ -0.63
GPC4-201ENST00000370828 TMEM186Q96B77 213 aa11.13□□□□□ -0.63
GPC4-201ENST00000370828 TNRC6CQ9HCJ0 1690 aaKnown RBP11.13□□□□□ -0.63
GPC4-201ENST00000370828 DICER1Q9UPY3 1922 aaKnown RBP11.13□□□□□ -0.63
GPC4-201ENST00000370828 TNFSF11O14788 317 aa11.13□□□□□ -0.63
GPC4-201ENST00000370828 HTR1DP28221 377 aa11.13□□□□□ -0.63
GPC4-201ENST00000370828 OR2I1PQ8NGU4 316 aa11.13□□□□□ -0.63
GPC4-201ENST00000370828 RFESDQ8TAC1 157 aa11.13□□□□□ -0.63
GPC4-201ENST00000370828 RNF133Q8WVZ7 376 aa11.13□□□□□ -0.63
GPC4-201ENST00000370828 MRGPRFQ96AM1 343 aa11.13□□□□□ -0.63
GPC4-201ENST00000370828 MRGPRX3Q96LB0 322 aa11.13□□□□□ -0.63
GPC4-201ENST00000370828 STRADBQ9C0K7 418 aa11.13□□□□□ -0.63
GPC4-201ENST00000370828 SLC2A8Q9NY64 477 aa11.13□□□□□ -0.63
GPC4-201ENST00000370828 TRPM3Q9HCF6 1732 aaPredicted RBP11.13□□□□□ -0.63
GPC4-201ENST00000370828 CTXND1A0A1B0GTU2 59 aa11.12□□□□□ -0.63
GPC4-201ENST00000370828 A0A1W2PPV9 198 aa11.12□□□□□ -0.63
GPC4-201ENST00000370828 RAMP1O60894 148 aa11.12□□□□□ -0.63
GPC4-201ENST00000370828 TBX6O95947 436 aaPredicted RBP11.12□□□□□ -0.63
GPC4-201ENST00000370828 CA2P00918 260 aa11.12□□□□□ -0.63
GPC4-201ENST00000370828 ZNF708P17019 499 aa11.12□□□□□ -0.63
GPC4-201ENST00000370828 TNFRSF4P43489 277 aa11.12□□□□□ -0.63
GPC4-201ENST00000370828 LYSMD4Q5XG99 296 aa11.12□□□□□ -0.63
GPC4-201ENST00000370828 ZNF296Q8WUU4 475 aaPredicted RBP11.12□□□□□ -0.63
GPC4-201ENST00000370828 KISS1RQ969F8 398 aaPredicted RBP11.12□□□□□ -0.63
GPC4-201ENST00000370828 NEUROG3Q9Y4Z2 214 aa11.12□□□□□ -0.63
GPC4-201ENST00000370828 EPHA8P29322 1005 aaPredicted RBP11.12□□□□□ -0.63
GPC4-201ENST00000370828 UQCRFS1P47985 274 aa11.12□□□□□ -0.63
GPC4-201ENST00000370828 RHOBP62745 196 aa11.12□□□□□ -0.63
GPC4-201ENST00000370828 MEF2BQ02080 365 aaPredicted RBP11.12□□□□□ -0.63
GPC4-201ENST00000370828 SPATA46Q5T0L3 261 aa11.12□□□□□ -0.63
GPC4-201ENST00000370828 ATOH7Q8N100 152 aa11.12□□□□□ -0.63
GPC4-201ENST00000370828 SPPL3Q8TCT6 385 aa11.12□□□□□ -0.63
GPC4-201ENST00000370828 SERGEFQ9UGK8 458 aa11.12□□□□□ -0.63
GPC4-201ENST00000370828 CD207Q9UJ71 328 aa11.12□□□□□ -0.63
GPC4-201ENST00000370828 CES1P1Q9UKY3 287 aa11.12□□□□□ -0.63
GPC4-201ENST00000370828 COL4A1P02462 1669 aa11.12□□□□□ -0.63
GPC4-201ENST00000370828 LY75O60449 1722 aa11.12□□□□□ -0.63
GPC4-201ENST00000370828 NRAPQ86VF7 1730 aa11.12□□□□□ -0.63
GPC4-201ENST00000370828 TRBV5-7A0A0A0MS05 114 aa11.12□□□□□ -0.63
GPC4-201ENST00000370828 FAM157BP0CG42 384 aa11.12□□□□□ -0.63
GPC4-201ENST00000370828 CXorf66Q5JRM2 361 aaPredicted RBP11.12□□□□□ -0.63
GPC4-201ENST00000370828 RPS19BP1Q86WX3 136 aaKnown RBP11.12□□□□□ -0.63
GPC4-201ENST00000370828 ST6GALNAC3Q8NDV1 305 aa11.12□□□□□ -0.63
GPC4-201ENST00000370828 VSTM2LQ96N03 204 aa11.12□□□□□ -0.63
GPC4-201ENST00000370828 SLC7A10Q9NS82 523 aa11.12□□□□□ -0.63
GPC4-201ENST00000370828 HDGFL3Q9Y3E1 203 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms