RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 GPX5O75715 221 aa12.84□□□□□ -0.35
VMA21-202ENST00000370361 OR7C1O76099 320 aaPredicted RBP12.84□□□□□ -0.35
VMA21-202ENST00000370361 HTR3BO95264 441 aa12.84□□□□□ -0.35
VMA21-202ENST00000370361 LALBAP00709 142 aa12.84□□□□□ -0.35
VMA21-202ENST00000370361 GTF2F2P13984 249 aa12.84□□□□□ -0.35
VMA21-202ENST00000370361 IL3RAP26951 378 aa12.84□□□□□ -0.35
VMA21-202ENST00000370361 TAS2R43P59537 309 aa12.84□□□□□ -0.35
VMA21-202ENST00000370361 ZNF816Q0VGE8 651 aaPredicted RBP12.84□□□□□ -0.35
VMA21-202ENST00000370361 ST3GAL4Q11206 333 aa12.84□□□□□ -0.35
VMA21-202ENST00000370361 RIPK1Q13546 671 aa12.84□□□□□ -0.35
VMA21-202ENST00000370361 PIGYQ3MUY2 71 aa12.84□□□□□ -0.35
VMA21-202ENST00000370361 YIF1BQ5BJH7 314 aa12.84□□□□□ -0.35
VMA21-202ENST00000370361 CDH26Q8IXH8 852 aa12.84□□□□□ -0.35
VMA21-202ENST00000370361 STX19Q8N4C7 294 aa12.84□□□□□ -0.35
VMA21-202ENST00000370361 SUMF2Q8NBJ7 301 aa12.84□□□□□ -0.35
VMA21-202ENST00000370361 MRGPRDQ8TDS7 321 aa12.84□□□□□ -0.35
VMA21-202ENST00000370361 NRG4Q8WWG1 115 aa12.84□□□□□ -0.35
VMA21-202ENST00000370361 PSORS1C1Q9UIG5 152 aa12.84□□□□□ -0.35
VMA21-202ENST00000370361 SIRT4Q9Y6E7 314 aaPredicted RBP12.84□□□□□ -0.35
VMA21-202ENST00000370361 A0A1W2PPI3 338 aa12.83□□□□□ -0.36
VMA21-202ENST00000370361 A0A1W2PRX2 142 aa12.83□□□□□ -0.36
VMA21-202ENST00000370361 PSMB11A5LHX3 300 aa12.83□□□□□ -0.36
VMA21-202ENST00000370361 ERICH4A6NGS2 130 aa12.83□□□□□ -0.36
VMA21-202ENST00000370361 CCRL2O00421 344 aa12.83□□□□□ -0.36
VMA21-202ENST00000370361 TXNL1O43396 289 aa12.83□□□□□ -0.36
VMA21-202ENST00000370361 ORC5O43913 435 aa12.83□□□□□ -0.36
VMA21-202ENST00000370361 GAPDHP04406 335 aaKnown RBP12.83□□□□□ -0.36
VMA21-202ENST00000370361 SNRNP70P08621 437 aaKnown RBP12.83□□□□□ -0.36
VMA21-202ENST00000370361 TMEM11P17152 192 aa12.83□□□□□ -0.36
VMA21-202ENST00000370361 SLC35B1P78383 322 aa12.83□□□□□ -0.36
VMA21-202ENST00000370361 HES1Q14469 280 aa12.83□□□□□ -0.36
VMA21-202ENST00000370361 Q499Y3 187 aa12.83□□□□□ -0.36
VMA21-202ENST00000370361 TCTEX1D4Q5JR98 221 aa12.83□□□□□ -0.36
VMA21-202ENST00000370361 HIST2H2BDQ6DRA6 164 aa12.83□□□□□ -0.36
VMA21-202ENST00000370361 LINC00311Q8N616 119 aa12.83□□□□□ -0.36
VMA21-202ENST00000370361 OR56B4Q8NH76 319 aa12.83□□□□□ -0.36
VMA21-202ENST00000370361 GON7Q9BXV9 100 aa12.83□□□□□ -0.36
VMA21-202ENST00000370361 ZFP57Q9NU63 452 aa12.83□□□□□ -0.36
VMA21-202ENST00000370361 AURKAIP1Q9NWT8 199 aaPredicted RBP12.83□□□□□ -0.36
VMA21-202ENST00000370361 ZMAT5Q9UDW3 170 aaKnown RBP12.83□□□□□ -0.36
VMA21-202ENST00000370361 FSTP19883 344 aa12.82□□□□□ -0.36
VMA21-202ENST00000370361 SSTR5P35346 364 aa12.82□□□□□ -0.36
VMA21-202ENST00000370361 DCTN2Q13561 401 aaKnown RBP12.82□□□□□ -0.36
VMA21-202ENST00000370361 EBI3Q14213 229 aa12.82□□□□□ -0.36
VMA21-202ENST00000370361 KHDC1LQ5JSQ8 128 aa12.82□□□□□ -0.36
VMA21-202ENST00000370361 C9orf152Q5JTZ5 239 aa12.82□□□□□ -0.36
VMA21-202ENST00000370361 FOXB2Q5VYV0 432 aa12.82□□□□□ -0.36
VMA21-202ENST00000370361 TRAT1Q6PIZ9 186 aa12.82□□□□□ -0.36
VMA21-202ENST00000370361 FOXRED2Q8IWF2 684 aa12.82□□□□□ -0.36
VMA21-202ENST00000370361 IZUMO1Q8IYV9 350 aa12.82□□□□□ -0.36
VMA21-202ENST00000370361 DRAM1Q8N682 238 aa12.82□□□□□ -0.36
VMA21-202ENST00000370361 C5orf56Q8N8D9 126 aa12.82□□□□□ -0.36
VMA21-202ENST00000370361 OR10K1Q8NGX5 313 aa12.82□□□□□ -0.36
VMA21-202ENST00000370361 PLPPR1Q8TBJ4 325 aa12.82□□□□□ -0.36
VMA21-202ENST00000370361 DPF1Q92782 380 aa12.82□□□□□ -0.36
VMA21-202ENST00000370361 MCRIP2Q9BUT9 160 aaKnown RBP12.82□□□□□ -0.36
VMA21-202ENST00000370361 FKBP14Q9NWM8 211 aa12.82□□□□□ -0.36
VMA21-202ENST00000370361 ING4Q9UNL4 249 aa12.82□□□□□ -0.36
VMA21-202ENST00000370361 TRBV5-5A0A0J9YX44 114 aa12.81□□□□□ -0.36
VMA21-202ENST00000370361 FAM90A10PA6NDY2 464 aa12.81□□□□□ -0.36
VMA21-202ENST00000370361 FAM90A7PA6NKC0 464 aa12.81□□□□□ -0.36
VMA21-202ENST00000370361 FAM90A23PA8MXZ1 464 aa12.81□□□□□ -0.36
VMA21-202ENST00000370361 HSD17B6O14756 317 aa12.81□□□□□ -0.36
VMA21-202ENST00000370361 CA11O75493 328 aa12.81□□□□□ -0.36
VMA21-202ENST00000370361 CDRT1O95170 752 aa12.81□□□□□ -0.36
VMA21-202ENST00000370361 IGFBP3P17936 291 aaPredicted RBP12.81□□□□□ -0.36
VMA21-202ENST00000370361 SERPINA2P20848 420 aa12.81□□□□□ -0.36
VMA21-202ENST00000370361 AQP4P55087 323 aa12.81□□□□□ -0.36
VMA21-202ENST00000370361 DMKNQ6E0U4 476 aaPredicted RBP12.81□□□□□ -0.36
VMA21-202ENST00000370361 AHSA2Q719I0 299 aa12.81□□□□□ -0.36
VMA21-202ENST00000370361 BPIFB6Q8NFQ5 453 aa12.81□□□□□ -0.36
VMA21-202ENST00000370361 OR8H1Q8NGG4 311 aa12.81□□□□□ -0.36
VMA21-202ENST00000370361 ZNF184Q99676 751 aaPredicted RBP12.81□□□□□ -0.36
VMA21-202ENST00000370361 GEMIN2O14893 280 aaKnown RBP12.8□□□□□ -0.36
VMA21-202ENST00000370361 IGHG2P01859 326 aa12.8□□□□□ -0.36
VMA21-202ENST00000370361 GLAP06280 429 aa12.8□□□□□ -0.36
VMA21-202ENST00000370361 GNG10P50151 68 aa12.8□□□□□ -0.36
VMA21-202ENST00000370361 GP2P55259 537 aaKnown RBP12.8□□□□□ -0.36
VMA21-202ENST00000370361 C6orf183Q5T699 404 aa12.8□□□□□ -0.36
VMA21-202ENST00000370361 STEAP3Q658P3 488 aa12.8□□□□□ -0.36
VMA21-202ENST00000370361 ZNF497Q6ZNH5 498 aa12.8□□□□□ -0.36
VMA21-202ENST00000370361 ZNF554Q86TJ5 538 aa12.8□□□□□ -0.36
VMA21-202ENST00000370361 TGIF2LXQ8IUE1 241 aa12.8□□□□□ -0.36
VMA21-202ENST00000370361 NKAIN3Q8N8D7 197 aa12.8□□□□□ -0.36
VMA21-202ENST00000370361 RFESDQ8TAC1 157 aa12.8□□□□□ -0.36
VMA21-202ENST00000370361 NEK7Q8TDX7 302 aa12.8□□□□□ -0.36
VMA21-202ENST00000370361 GHSRQ92847 366 aa12.8□□□□□ -0.36
VMA21-202ENST00000370361 ARL11Q969Q4 196 aa12.8□□□□□ -0.36
VMA21-202ENST00000370361 IGHV1-3A0A0C4DH29 117 aa12.79□□□□□ -0.36
VMA21-202ENST00000370361 SERPINE3A8MV23 424 aa12.79□□□□□ -0.36
VMA21-202ENST00000370361 MCRIP1C9JLW8 97 aa12.79□□□□□ -0.36
VMA21-202ENST00000370361 C15orf65H3BRN8 121 aa12.79□□□□□ -0.36
VMA21-202ENST00000370361 AIPO00170 330 aa12.79□□□□□ -0.36
VMA21-202ENST00000370361 SDCBPO00560 298 aaPredicted RBP12.79□□□□□ -0.36
VMA21-202ENST00000370361 SPINT2O43291 252 aa12.79□□□□□ -0.36
VMA21-202ENST00000370361 IGKV1D-33P01593 117 aa12.79□□□□□ -0.36
VMA21-202ENST00000370361 IGKV1-33P01594 117 aa12.79□□□□□ -0.36
VMA21-202ENST00000370361 PRB2P02812 416 aaPredicted RBP12.79□□□□□ -0.36
VMA21-202ENST00000370361 CD1AP06126 327 aa12.79□□□□□ -0.36
VMA21-202ENST00000370361 IGLL1P15814 213 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms