RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 PLCXD3Q63HM9 321 aa10.57□□□□□ -0.72
PHGDH-201ENST00000369407 SP5Q6BEB4 398 aaPredicted RBP10.57□□□□□ -0.72
PHGDH-201ENST00000369407 SLC25A26Q70HW3 274 aa10.57□□□□□ -0.72
PHGDH-201ENST00000369407 OR13D1Q8NGV5 346 aa10.57□□□□□ -0.72
PHGDH-201ENST00000369407 RBMXL1Q96E39 390 aaKnown RBP10.57□□□□□ -0.72
PHGDH-201ENST00000369407 LOC102724200A0A096LPH7 203 aaPredicted RBP10.57□□□□□ -0.72
PHGDH-201ENST00000369407 IL18BPO95998 194 aa10.57□□□□□ -0.72
PHGDH-201ENST00000369407 CYB5R3P00387 301 aaPredicted RBP10.57□□□□□ -0.72
PHGDH-201ENST00000369407 B4GALT1P15291 398 aa10.57□□□□□ -0.72
PHGDH-201ENST00000369407 TCN2P20062 427 aa10.57□□□□□ -0.72
PHGDH-201ENST00000369407 GZMHP20718 246 aa10.57□□□□□ -0.72
PHGDH-201ENST00000369407 CD38P28907 300 aa10.57□□□□□ -0.72
PHGDH-201ENST00000369407 TAS2R30P59541 319 aa10.57□□□□□ -0.72
PHGDH-201ENST00000369407 RPUSD4Q96CM3 377 aaKnown RBP10.57□□□□□ -0.72
PHGDH-201ENST00000369407 HIST1H2AAQ96QV6 131 aa10.57□□□□□ -0.72
PHGDH-201ENST00000369407 ATP5SQ99766 215 aa10.57□□□□□ -0.72
PHGDH-201ENST00000369407 AKIRIN1Q9H9L7 192 aaPredicted RBP10.57□□□□□ -0.72
PHGDH-201ENST00000369407 PITPNC1Q9UKF7 332 aa10.57□□□□□ -0.72
PHGDH-201ENST00000369407 SIAH2O43255 324 aa10.56□□□□□ -0.72
PHGDH-201ENST00000369407 PDCD6O75340 191 aa10.56□□□□□ -0.72
PHGDH-201ENST00000369407 METTL15P1P0C7V9 234 aa10.56□□□□□ -0.72
PHGDH-201ENST00000369407 BCL2P10415 239 aa10.56□□□□□ -0.72
PHGDH-201ENST00000369407 JOSD1Q15040 202 aaPredicted RBP10.56□□□□□ -0.72
PHGDH-201ENST00000369407 RAET1LQ5VY80 246 aa10.56□□□□□ -0.72
PHGDH-201ENST00000369407 FAM185AQ8N0U4 392 aa10.56□□□□□ -0.72
PHGDH-201ENST00000369407 OR1K1Q8NGR3 316 aa10.56□□□□□ -0.72
PHGDH-201ENST00000369407 NEK7Q8TDX7 302 aa10.56□□□□□ -0.72
PHGDH-201ENST00000369407 ZNF501Q96CX3 271 aaPredicted RBP10.56□□□□□ -0.72
PHGDH-201ENST00000369407 DIRC2Q96SL1 478 aa10.56□□□□□ -0.72
PHGDH-201ENST00000369407 TAAR3PQ9P1P4 343 aa10.56□□□□□ -0.72
PHGDH-201ENST00000369407 MYOTQ9UBF9 498 aa10.56□□□□□ -0.72
PHGDH-201ENST00000369407 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.56□□□□□ -0.72
PHGDH-201ENST00000369407 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.56□□□□□ -0.72
PHGDH-201ENST00000369407 ZNF705FA8MVS1 300 aaPredicted RBP10.56□□□□□ -0.72
PHGDH-201ENST00000369407 ZNF705DP0CH99 300 aaPredicted RBP10.56□□□□□ -0.72
PHGDH-201ENST00000369407 ZNF705BP0CI00 300 aaPredicted RBP10.56□□□□□ -0.72
PHGDH-201ENST00000369407 TESK1Q15569 626 aa10.56□□□□□ -0.72
PHGDH-201ENST00000369407 ZNF66Q6ZN08 573 aa10.56□□□□□ -0.72
PHGDH-201ENST00000369407 C16orf82Q7Z2V1 217 aa10.56□□□□□ -0.72
PHGDH-201ENST00000369407 TMEM183AQ8IXX5 376 aa10.56□□□□□ -0.72
PHGDH-201ENST00000369407 OR10A7Q8NGE5 316 aa10.56□□□□□ -0.72
PHGDH-201ENST00000369407 SNIP1Q8TAD8 396 aaKnown RBP10.56□□□□□ -0.72
PHGDH-201ENST00000369407 SPSB1Q96BD6 273 aa10.56□□□□□ -0.72
PHGDH-201ENST00000369407 RBKSQ9H477 322 aa10.56□□□□□ -0.72
PHGDH-201ENST00000369407 PLK3Q9H4B4 646 aa10.56□□□□□ -0.72
PHGDH-201ENST00000369407 SDF2L1Q9HCN8 221 aa10.56□□□□□ -0.72
PHGDH-201ENST00000369407 CLEC1BQ9P126 229 aa10.56□□□□□ -0.72
PHGDH-201ENST00000369407 MTCH2Q9Y6C9 303 aa10.56□□□□□ -0.72
PHGDH-201ENST00000369407 DMDP11532 3685 aa10.55□□□□□ -0.72
PHGDH-201ENST00000369407 ZNF92Q03936 586 aa10.55□□□□□ -0.72
PHGDH-201ENST00000369407 ARL16Q0P5N6 197 aa10.55□□□□□ -0.72
PHGDH-201ENST00000369407 DAZAP2Q15038 168 aaPredicted RBP10.55□□□□□ -0.72
PHGDH-201ENST00000369407 EXT1Q16394 746 aa10.55□□□□□ -0.72
PHGDH-201ENST00000369407 UBALD1Q8TB05 177 aa10.55□□□□□ -0.72
PHGDH-201ENST00000369407 EXTL1Q92935 676 aa10.55□□□□□ -0.72
PHGDH-201ENST00000369407 RAB24Q969Q5 203 aa10.55□□□□□ -0.72
PHGDH-201ENST00000369407 ALKBH3Q96Q83 286 aaPredicted RBP10.55□□□□□ -0.72
PHGDH-201ENST00000369407 ASCL3Q9NQ33 180 aa10.55□□□□□ -0.72
PHGDH-201ENST00000369407 SEMA5BQ9P283 1151 aa10.55□□□□□ -0.72
PHGDH-201ENST00000369407 ATG2AQ2TAZ0 1938 aa10.55□□□□□ -0.72
PHGDH-201ENST00000369407 AQP7O14520 342 aa10.55□□□□□ -0.72
PHGDH-201ENST00000369407 TOX3O15405 576 aaPredicted RBP10.55□□□□□ -0.72
PHGDH-201ENST00000369407 IFNA5P01569 189 aa10.55□□□□□ -0.72
PHGDH-201ENST00000369407 HBE1P02100 147 aa10.55□□□□□ -0.72
PHGDH-201ENST00000369407 TMEM11P17152 192 aa10.55□□□□□ -0.72
PHGDH-201ENST00000369407 HNF1AP20823 631 aa10.55□□□□□ -0.72
PHGDH-201ENST00000369407 OTX1P32242 354 aaPredicted RBP10.55□□□□□ -0.72
PHGDH-201ENST00000369407 ID3Q02535 119 aa10.55□□□□□ -0.72
PHGDH-201ENST00000369407 CNN3Q15417 329 aaKnown RBP10.55□□□□□ -0.72
PHGDH-201ENST00000369407 NMSQ5H8A3 153 aa10.55□□□□□ -0.72
PHGDH-201ENST00000369407 OR1P1Q8NH06 330 aa10.55□□□□□ -0.72
PHGDH-201ENST00000369407 FGFBP3Q8TAT2 258 aa10.55□□□□□ -0.72
PHGDH-201ENST00000369407 CDCA3Q99618 268 aaPredicted RBP10.55□□□□□ -0.72
PHGDH-201ENST00000369407 SPIN2AQ99865 258 aa10.55□□□□□ -0.72
PHGDH-201ENST00000369407 SPIN2BQ9BPZ2 258 aa10.55□□□□□ -0.72
PHGDH-201ENST00000369407 PCGF1Q9BSM1 259 aa10.55□□□□□ -0.72
PHGDH-201ENST00000369407 PPIAL4AQ9Y536 164 aa10.55□□□□□ -0.72
PHGDH-201ENST00000369407 A0A1W2PPQ1 181 aa10.55□□□□□ -0.72
PHGDH-201ENST00000369407 SLC22A20A6NK97 555 aa10.55□□□□□ -0.72
PHGDH-201ENST00000369407 RPS16P62249 146 aaKnown RBP10.55□□□□□ -0.72
PHGDH-201ENST00000369407 HERPUD1Q15011 391 aa10.55□□□□□ -0.72
PHGDH-201ENST00000369407 ZNF295-AS1Q8N0V1 137 aa10.55□□□□□ -0.72
PHGDH-201ENST00000369407 ZNF611Q8N823 705 aa10.55□□□□□ -0.72
PHGDH-201ENST00000369407 OR8G5Q8NG78 346 aa10.55□□□□□ -0.72
PHGDH-201ENST00000369407 TMEM56Q96MV1 263 aa10.55□□□□□ -0.72
PHGDH-201ENST00000369407 OR51B6Q9H340 312 aa10.55□□□□□ -0.72
PHGDH-201ENST00000369407 Q9N2K0 584 aa10.55□□□□□ -0.72
PHGDH-201ENST00000369407 AURKAIP1Q9NWT8 199 aaPredicted RBP10.55□□□□□ -0.72
PHGDH-201ENST00000369407 TMEM56-RWDD3S4R434 201 aa10.55□□□□□ -0.72
PHGDH-201ENST00000369407 CACNA1DQ01668 2161 aa10.54□□□□□ -0.72
PHGDH-201ENST00000369407 TRAV39A0A0B4J263 110 aa10.54□□□□□ -0.72
PHGDH-201ENST00000369407 A0A1B0GUS0 222 aa10.54□□□□□ -0.72
PHGDH-201ENST00000369407 TNFSF11O14788 317 aa10.54□□□□□ -0.72
PHGDH-201ENST00000369407 IGHV3-9P01782 118 aa10.54□□□□□ -0.72
PHGDH-201ENST00000369407 CD33P20138 364 aa10.54□□□□□ -0.72
PHGDH-201ENST00000369407 NTF4P34130 210 aa10.54□□□□□ -0.72
PHGDH-201ENST00000369407 RND2P52198 227 aa10.54□□□□□ -0.72
PHGDH-201ENST00000369407 UCP3P55916 312 aa10.54□□□□□ -0.72
PHGDH-201ENST00000369407 RBM11P57052 281 aaKnown RBP10.54□□□□□ -0.72
PHGDH-201ENST00000369407 PMS2P11Q13670 270 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms