RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 KCNG3Q8TAE7 436 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 NEK7Q8TDX7 302 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 DYRK2Q92630 601 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 ABCB10Q9NRK6 738 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 V9GYH0 126 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 hCG_1809904A0A1W2PP81 198 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 A0A1W2PPE2 198 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 A0A1W2PR64 198 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 A0A1W2PRV1 198 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 FAM90A10PA6NDY2 464 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 FAM90A18PA6NE21 464 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 FAM90A16PA6NEW6 464 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 FAM90A20PA6NIJ5 464 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 FAM90A8PA6NJQ4 464 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 FAM90A7PA6NKC0 464 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 FAM90A22PA8MWA6 464 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 FAM90A12PA8MX19 464 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 FAM90A5PA8MXJ8 464 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 FAM90A23PA8MXZ1 464 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 RBP4P02753 201 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 FAM90A15PP0C7V4 464 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 FAM90A13PP0C7W8 464 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 FAM90A14PP0C7W9 464 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 FAM90A24PP0C7X0 464 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 OMGP23515 440 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 CD40LGP29965 261 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 SAA4P35542 130 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 GLP1RP43220 463 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 KCNJ3P48549 501 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 PPP5CP53041 499 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 PAX5Q02548 391 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 C17orf50Q8WW18 174 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 FAM3DQ96BQ1 224 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 KCTD12Q96CX2 325 aaKnown RBP12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 MDFIQ99750 246 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 TM2D1Q9BX74 207 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 LPAR5Q9H1C0 372 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 EXTL2Q9UBQ6 330 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 STEAP1Q9UHE8 339 aa12.29□□□□□ -0.44
SMPDL3A-201ENST00000368440 A0A0A6YYJ9 748 aa12.28□□□□□ -0.44
SMPDL3A-201ENST00000368440 DNAJC9-AS1A6NH13 148 aa12.28□□□□□ -0.44
SMPDL3A-201ENST00000368440 CGB3P0DN86 165 aa12.28□□□□□ -0.44
SMPDL3A-201ENST00000368440 CGB7P0DN87 165 aa12.28□□□□□ -0.44
SMPDL3A-201ENST00000368440 IL18Q14116 193 aa12.28□□□□□ -0.44
SMPDL3A-201ENST00000368440 C17orf58Q2M2W7 97 aa12.28□□□□□ -0.44
SMPDL3A-201ENST00000368440 C2orf76Q3KRA6 126 aa12.28□□□□□ -0.44
SMPDL3A-201ENST00000368440 MRGPRDQ8TDS7 321 aa12.28□□□□□ -0.44
SMPDL3A-201ENST00000368440 HEXA-AS1Q9H8Q6 139 aa12.28□□□□□ -0.44
SMPDL3A-201ENST00000368440 SPACA1Q9HBV2 294 aa12.28□□□□□ -0.44
SMPDL3A-201ENST00000368440 TAS2R3Q9NYW6 316 aa12.28□□□□□ -0.44
SMPDL3A-201ENST00000368440 ADAM30Q9UKF2 790 aa12.28□□□□□ -0.44
SMPDL3A-201ENST00000368440 ATRQ13535 2644 aa12.28□□□□□ -0.44
SMPDL3A-201ENST00000368440 MEIOCA2RUB1 952 aa12.27□□□□□ -0.44
SMPDL3A-201ENST00000368440 FAM172BPA6NC97 362 aa12.27□□□□□ -0.44
SMPDL3A-201ENST00000368440 MCRIP1C9JLW8 97 aa12.27□□□□□ -0.44
SMPDL3A-201ENST00000368440 LDLRAD4O15165 306 aa12.27□□□□□ -0.44
SMPDL3A-201ENST00000368440 PDCD6O75340 191 aa12.27□□□□□ -0.44
SMPDL3A-201ENST00000368440 FUT3P21217 361 aa12.27□□□□□ -0.44
SMPDL3A-201ENST00000368440 CDK2P24941 298 aa12.27□□□□□ -0.44
SMPDL3A-201ENST00000368440 PAX6P26367 422 aa12.27□□□□□ -0.44
SMPDL3A-201ENST00000368440 CHATP28329 748 aa12.27□□□□□ -0.44
SMPDL3A-201ENST00000368440 PSMD7P51665 324 aa12.27□□□□□ -0.44
SMPDL3A-201ENST00000368440 IFITM3Q01628 133 aa12.27□□□□□ -0.44
SMPDL3A-201ENST00000368440 BAMBIQ13145 260 aa12.27□□□□□ -0.44
SMPDL3A-201ENST00000368440 PYDC2Q56P42 97 aa12.27□□□□□ -0.44
SMPDL3A-201ENST00000368440 NKAPLQ5M9Q1 402 aa12.27□□□□□ -0.44
SMPDL3A-201ENST00000368440 UTF1Q5T230 341 aa12.27□□□□□ -0.44
SMPDL3A-201ENST00000368440 SLC35E4Q6ICL7 350 aa12.27□□□□□ -0.44
SMPDL3A-201ENST00000368440 RBMS3Q6XE24 437 aaKnown RBP12.27□□□□□ -0.44
SMPDL3A-201ENST00000368440 ZNF497Q6ZNH5 498 aa12.27□□□□□ -0.44
SMPDL3A-201ENST00000368440 OR2W3Q7Z3T1 314 aa12.27□□□□□ -0.44
SMPDL3A-201ENST00000368440 AJUBAQ96IF1 538 aa12.27□□□□□ -0.44
SMPDL3A-201ENST00000368440 GAL3ST2Q9H3Q3 398 aa12.27□□□□□ -0.44
SMPDL3A-201ENST00000368440 PRDM13Q9H4Q3 707 aa12.27□□□□□ -0.44
SMPDL3A-201ENST00000368440 OR6C3Q9NZP0 311 aa12.27□□□□□ -0.44
SMPDL3A-201ENST00000368440 ABRACLQ9P1F3 81 aa12.27□□□□□ -0.44
SMPDL3A-201ENST00000368440 SESN1Q9Y6P5 492 aa12.27□□□□□ -0.44
SMPDL3A-201ENST00000368440 TMEM272A0A1B0GTI8 110 aa12.27□□□□□ -0.45
SMPDL3A-201ENST00000368440 TMEM30CPA0ZSE6 113 aa12.27□□□□□ -0.45
SMPDL3A-201ENST00000368440 UBE2QL1A1L167 161 aa12.27□□□□□ -0.45
SMPDL3A-201ENST00000368440 ZNF729A6NN14 1252 aaPredicted RBP12.27□□□□□ -0.45
SMPDL3A-201ENST00000368440 CFPP27918 469 aa12.27□□□□□ -0.45
SMPDL3A-201ENST00000368440 ETV6P41212 452 aa12.27□□□□□ -0.45
SMPDL3A-201ENST00000368440 ZNF79Q15937 498 aa12.27□□□□□ -0.45
SMPDL3A-201ENST00000368440 IZUMO1Q8IYV9 350 aa12.27□□□□□ -0.45
SMPDL3A-201ENST00000368440 CCDC107Q8WV48 283 aa12.27□□□□□ -0.45
SMPDL3A-201ENST00000368440 SULT4A1Q9BR01 284 aa12.27□□□□□ -0.45
SMPDL3A-201ENST00000368440 NCOR1P1Q9H4R4 102 aa12.27□□□□□ -0.45
SMPDL3A-201ENST00000368440 ETAA1Q9NY74 926 aa12.27□□□□□ -0.45
SMPDL3A-201ENST00000368440 CALYQ9NYX4 217 aa12.27□□□□□ -0.45
SMPDL3A-201ENST00000368440 ODF3BA8MYP8 253 aa12.26□□□□□ -0.45
SMPDL3A-201ENST00000368440 SOCS1O15524 211 aa12.26□□□□□ -0.45
SMPDL3A-201ENST00000368440 HOXA3O43365 443 aaPredicted RBP12.26□□□□□ -0.45
SMPDL3A-201ENST00000368440 MT-ND4P03905 459 aa12.26□□□□□ -0.45
SMPDL3A-201ENST00000368440 MELTFP08582 738 aa12.26□□□□□ -0.45
SMPDL3A-201ENST00000368440 SSTR5P35346 364 aa12.26□□□□□ -0.45
SMPDL3A-201ENST00000368440 TALDO1P37837 337 aa12.26□□□□□ -0.45
SMPDL3A-201ENST00000368440 EFNB2P52799 333 aa12.26□□□□□ -0.45
SMPDL3A-201ENST00000368440 UBA52P62987 128 aaKnown RBP12.26□□□□□ -0.45
SMPDL3A-201ENST00000368440 LDLRAD2Q5SZI1 272 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms