RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 TPPPO94811 219 aa11.07□□□□□ -0.64
VAMP4-202ENST00000367740 KDM4BO94953 1096 aa11.07□□□□□ -0.64
VAMP4-202ENST00000367740 VHLP40337 213 aa11.07□□□□□ -0.64
VAMP4-202ENST00000367740 PDZK1IP1Q13113 114 aa11.07□□□□□ -0.64
VAMP4-202ENST00000367740 CDK5R1Q15078 307 aa11.07□□□□□ -0.64
VAMP4-202ENST00000367740 OR9G4Q8NGQ1 327 aa11.07□□□□□ -0.64
VAMP4-202ENST00000367740 RGP1Q92546 391 aaPredicted RBP11.07□□□□□ -0.64
VAMP4-202ENST00000367740 APOL4Q9BPW4 351 aa11.07□□□□□ -0.64
VAMP4-202ENST00000367740 NIPSNAP1Q9BPW8 284 aa11.07□□□□□ -0.64
VAMP4-202ENST00000367740 NEURL2Q9BR09 285 aa11.07□□□□□ -0.64
VAMP4-202ENST00000367740 NCOR1P1Q9H4R4 102 aa11.07□□□□□ -0.64
VAMP4-202ENST00000367740 SRD5A3Q9H8P0 318 aa11.07□□□□□ -0.64
VAMP4-202ENST00000367740 GMNNO75496 209 aa11.06□□□□□ -0.64
VAMP4-202ENST00000367740 COX4I1P13073 169 aa11.06□□□□□ -0.64
VAMP4-202ENST00000367740 CRIP2P52943 208 aaPredicted RBP11.06□□□□□ -0.64
VAMP4-202ENST00000367740 MTCP1P56278 107 aa11.06□□□□□ -0.64
VAMP4-202ENST00000367740 APOFQ13790 326 aa11.06□□□□□ -0.64
VAMP4-202ENST00000367740 RSBN1Q5VWQ0 802 aaPredicted RBP11.06□□□□□ -0.64
VAMP4-202ENST00000367740 RFT1Q96AA3 541 aa11.06□□□□□ -0.64
VAMP4-202ENST00000367740 RHOVQ96L33 236 aa11.06□□□□□ -0.64
VAMP4-202ENST00000367740 ANKRD60Q9BZ19 345 aa11.06□□□□□ -0.64
VAMP4-202ENST00000367740 ETAA1Q9NY74 926 aa11.06□□□□□ -0.64
VAMP4-202ENST00000367740 MYRFQ9Y2G1 1151 aa11.06□□□□□ -0.64
VAMP4-202ENST00000367740 SNX5Q9Y5X3 404 aa11.06□□□□□ -0.64
VAMP4-202ENST00000367740 TRAV39A0A0B4J263 110 aa11.05□□□□□ -0.64
VAMP4-202ENST00000367740 H3BN98 237 aa11.05□□□□□ -0.64
VAMP4-202ENST00000367740 DEGS1O15121 323 aa11.05□□□□□ -0.64
VAMP4-202ENST00000367740 TXNL1O43396 289 aa11.05□□□□□ -0.64
VAMP4-202ENST00000367740 SYT7O43581 403 aa11.05□□□□□ -0.64
VAMP4-202ENST00000367740 CD7P09564 240 aa11.05□□□□□ -0.64
VAMP4-202ENST00000367740 LORP23490 312 aaPredicted RBP11.05□□□□□ -0.64
VAMP4-202ENST00000367740 IL3RAP26951 378 aa11.05□□□□□ -0.64
VAMP4-202ENST00000367740 KLF5Q13887 457 aaPredicted RBP11.05□□□□□ -0.64
VAMP4-202ENST00000367740 LRRC36Q1X8D7 754 aa11.05□□□□□ -0.64
VAMP4-202ENST00000367740 ZNF322Q6U7Q0 402 aaPredicted RBP11.05□□□□□ -0.64
VAMP4-202ENST00000367740 CD300LDQ6UXZ3 194 aa11.05□□□□□ -0.64
VAMP4-202ENST00000367740 HACD2Q6Y1H2 254 aa11.05□□□□□ -0.64
VAMP4-202ENST00000367740 C8orf31Q8N9H6 132 aa11.05□□□□□ -0.64
VAMP4-202ENST00000367740 PLPPR1Q8TBJ4 325 aa11.05□□□□□ -0.64
VAMP4-202ENST00000367740 RITA1Q96K30 269 aa11.05□□□□□ -0.64
VAMP4-202ENST00000367740 TMEM14AQ9Y6G1 99 aa11.05□□□□□ -0.64
VAMP4-202ENST00000367740 CCDC182A6NF36 153 aa11.04□□□□□ -0.64
VAMP4-202ENST00000367740 H0YJX3 145 aa11.04□□□□□ -0.64
VAMP4-202ENST00000367740 SLC31A2O15432 143 aa11.04□□□□□ -0.64
VAMP4-202ENST00000367740 SERPINA3P01011 423 aa11.04□□□□□ -0.64
VAMP4-202ENST00000367740 CSN3P07498 182 aa11.04□□□□□ -0.64
VAMP4-202ENST00000367740 ZP3P21754 424 aa11.04□□□□□ -0.64
VAMP4-202ENST00000367740 ZNF137PP52743 207 aa11.04□□□□□ -0.64
VAMP4-202ENST00000367740 TPPP2P59282 170 aa11.04□□□□□ -0.64
VAMP4-202ENST00000367740 ACTBP60709 375 aa11.04□□□□□ -0.64
VAMP4-202ENST00000367740 CXCR4P61073 352 aa11.04□□□□□ -0.64
VAMP4-202ENST00000367740 PSME3P61289 254 aa11.04□□□□□ -0.64
VAMP4-202ENST00000367740 PAX5Q02548 391 aa11.04□□□□□ -0.64
VAMP4-202ENST00000367740 TNFRSF9Q07011 255 aa11.04□□□□□ -0.64
VAMP4-202ENST00000367740 LSAMPQ13449 338 aa11.04□□□□□ -0.64
VAMP4-202ENST00000367740 PAN3Q58A45 887 aaKnown RBP11.04□□□□□ -0.64
VAMP4-202ENST00000367740 PYHIN1Q6K0P9 492 aa11.04□□□□□ -0.64
VAMP4-202ENST00000367740 LINC00336Q6ZUF6 198 aa11.04□□□□□ -0.64
VAMP4-202ENST00000367740 RDH10Q8IZV5 341 aa11.04□□□□□ -0.64
VAMP4-202ENST00000367740 TCTEX1D1Q8N7M0 179 aa11.04□□□□□ -0.64
VAMP4-202ENST00000367740 MS4A10Q96PG2 267 aa11.04□□□□□ -0.64
VAMP4-202ENST00000367740 MAGEL2Q9UJ55 1249 aa11.04□□□□□ -0.64
VAMP4-202ENST00000367740 TRAV24A0A0B4J272 114 aa11.03□□□□□ -0.64
VAMP4-202ENST00000367740 TFAP2AP05549 437 aa11.03□□□□□ -0.64
VAMP4-202ENST00000367740 MAGEA2P43356 314 aa11.03□□□□□ -0.64
VAMP4-202ENST00000367740 SYNJ2BPP57105 145 aa11.03□□□□□ -0.64
VAMP4-202ENST00000367740 MICAQ29983 383 aa11.03□□□□□ -0.64
VAMP4-202ENST00000367740 C5orf64Q2M2E5 130 aa11.03□□□□□ -0.64
VAMP4-202ENST00000367740 CGB2Q6NT52 195 aa11.03□□□□□ -0.64
VAMP4-202ENST00000367740 SLC25A48Q6ZT89 311 aaKnown RBP11.03□□□□□ -0.64
VAMP4-202ENST00000367740 LYG2Q86SG7 212 aa11.03□□□□□ -0.64
VAMP4-202ENST00000367740 OR5D18Q8NGL1 313 aa11.03□□□□□ -0.64
VAMP4-202ENST00000367740 PP6455Q8WZ26 134 aa11.03□□□□□ -0.64
VAMP4-202ENST00000367740 BARHL1Q9BZE3 327 aa11.03□□□□□ -0.64
VAMP4-202ENST00000367740 CST11Q9H112 138 aa11.03□□□□□ -0.64
VAMP4-202ENST00000367740 EFCAB1Q9HAE3 211 aa11.03□□□□□ -0.64
VAMP4-202ENST00000367740 RANGRFQ9HD47 186 aaPredicted RBP11.03□□□□□ -0.64
VAMP4-202ENST00000367740 SPAG4Q9NPE6 437 aa11.03□□□□□ -0.64
VAMP4-202ENST00000367740 ADAM30Q9UKF2 790 aa11.03□□□□□ -0.64
VAMP4-202ENST00000367740 A3GALT2U3KPV4 340 aa11.03□□□□□ -0.64
VAMP4-202ENST00000367740 IGHV3-43A0A0B4J1X8 118 aa11.02□□□□□ -0.65
VAMP4-202ENST00000367740 OR11H12B2RN74 326 aa11.02□□□□□ -0.65
VAMP4-202ENST00000367740 SDCBPO00560 298 aaPredicted RBP11.02□□□□□ -0.65
VAMP4-202ENST00000367740 NBR2O15453 112 aa11.02□□□□□ -0.65
VAMP4-202ENST00000367740 IGHV3-43DP0DP04 118 aa11.02□□□□□ -0.65
VAMP4-202ENST00000367740 EGR2P11161 476 aaPredicted RBP11.02□□□□□ -0.65
VAMP4-202ENST00000367740 MECP2P51608 486 aaKnown RBP11.02□□□□□ -0.65
VAMP4-202ENST00000367740 GINS1Q14691 196 aa11.02□□□□□ -0.65
VAMP4-202ENST00000367740 LIN54Q6MZP7 749 aa11.02□□□□□ -0.65
VAMP4-202ENST00000367740 FAHD1Q6P587 224 aa11.02□□□□□ -0.65
VAMP4-202ENST00000367740 TMEM179BQ7Z7N9 219 aa11.02□□□□□ -0.65
VAMP4-202ENST00000367740 LAX1Q8IWV1 398 aa11.02□□□□□ -0.65
VAMP4-202ENST00000367740 OR52M1Q8NGK5 317 aa11.02□□□□□ -0.65
VAMP4-202ENST00000367740 UBALD1Q8TB05 177 aa11.02□□□□□ -0.65
VAMP4-202ENST00000367740 C10orf35Q96D05 121 aa11.02□□□□□ -0.65
VAMP4-202ENST00000367740 ADAT3Q96EY9 351 aaPredicted RBP11.02□□□□□ -0.65
VAMP4-202ENST00000367740 ATP6V1G3Q96LB4 118 aa11.02□□□□□ -0.65
VAMP4-202ENST00000367740 NSMCE2Q96MF7 247 aa11.02□□□□□ -0.65
VAMP4-202ENST00000367740 RHOFQ9HBH0 211 aa11.02□□□□□ -0.65
VAMP4-202ENST00000367740 GFOD1Q9NXC2 390 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms