RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 C11orf94C9JXX5 98 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 FUT1P19526 365 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 PCBP4P57723 403 aaKnown RBP3.3□□□□□ -1.88
SYNE1-207ENST00000367255 CXorf36Q9H7Y0 433 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 TRBV4-1A0A0J9YWV2 114 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 ZNF840PA6NDX5 716 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 K7EP13 123 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 EIF4EP06730 217 aaKnown RBP3.3□□□□□ -1.88
SYNE1-207ENST00000367255 ARL16Q0P5N6 197 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 C1orf53Q5VUE5 145 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 SPSB4Q96A44 273 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 OXGR1Q96P68 337 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 VN1R3Q9BXE9 311 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 NAGKQ9UJ70 344 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 ESDP10768 282 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 CDKN1BP46527 198 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 ZXDAP98168 799 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 INSL6Q9Y581 213 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 TRAPPC1Q9Y5R8 145 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 TRBV5-7A0A0A0MS05 114 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.3□□□□□ -1.88
SYNE1-207ENST00000367255 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.3□□□□□ -1.88
SYNE1-207ENST00000367255 K7ESF4 209 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 SHISA6Q6ZSJ9 500 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 RNF183Q96D59 192 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 IL23AQ9NPF7 189 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 TNFSF14O43557 240 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 GALR1P47211 349 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 MLF2Q15773 248 aaPredicted RBP3.3□□□□□ -1.88
SYNE1-207ENST00000367255 RPS26P11Q5JNZ5 115 aaPredicted RBP3.3□□□□□ -1.88
SYNE1-207ENST00000367255 OR5P3Q8WZ94 311 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 APC2O95996 2303 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 CTAG2O75638 210 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 C1orf105O95561 183 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 SELLP14151 372 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 MYBPHQ13203 477 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 HES3Q5TGS1 186 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 TMEM88Q6PEY1 159 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 THAP10Q9P2Z0 257 aaPredicted RBP3.3□□□□□ -1.88
SYNE1-207ENST00000367255 SRSF9Q13242 221 aaKnown RBP eCLIP3.3□□□□□ -1.88
SYNE1-207ENST00000367255 PAQR9Q6ZVX9 377 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 MRPL37Q9BZE1 423 aaKnown RBP3.3□□□□□ -1.88
SYNE1-207ENST00000367255 CCL15-CCL14A0A0B4J2E2 113 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 A0A1W2PRE2 83 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 TMPRSS2O15393 492 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 CLDN18P56856 261 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 PRSS50Q9UI38 385 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 FGF17O60258 216 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 PSG1P11464 419 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 CCDC140Q96MF4 163 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 ZNF703Q9H7S9 590 aaPredicted RBP3.3□□□□□ -1.88
SYNE1-207ENST00000367255 A0A1W2PNV4 684 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 WNT10BO00744 389 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 MAGEA5P43359 124 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 ST3GAL2Q16842 350 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 A0A0D9SEW6 157 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 C11orf98E9PRG8 122 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 AMY1AP04745 511 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 EFNB2P52799 333 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 Q0VG73 95 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 C6orf201Q7Z4U5 140 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 FCN1O00602 326 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 CDX4O14627 284 aaPredicted RBP3.3□□□□□ -1.88
SYNE1-207ENST00000367255 GPR32P1Q8NGA4 272 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 OR10J6PQ8NGY7 276 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 OR52N5Q8NH56 324 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 IGHG4P01861 327 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 FAM157CP0CG43 387 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 GNG3P63215 75 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 RELBQ01201 579 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 P2RY6Q15077 328 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 OR52E2Q8NGJ4 325 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 TMEM30CPA0ZSE6 113 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 NPIPB7O75200 414 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 SLC25A5P05141 298 aaKnown RBP3.3□□□□□ -1.88
SYNE1-207ENST00000367255 OR1Q1Q15612 314 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 RTN4RL1Q86UN2 441 aaPredicted RBP3.3□□□□□ -1.88
SYNE1-207ENST00000367255 HBBP68871 147 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 UBE2V1Q13404 147 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 INSL4Q14641 139 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 PRR31Q5SQ13 230 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 TMEM182Q6ZP80 229 aaPredicted RBP3.3□□□□□ -1.88
SYNE1-207ENST00000367255 TNFRSF12AQ9NP84 129 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 TNFSF13O75888 250 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 WISP3O95389 354 aaPredicted RBP3.3□□□□□ -1.88
SYNE1-207ENST00000367255 ALOX5APP20292 161 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 REG4Q9BYZ8 158 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 H3BMM0 161 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 CD52P31358 61 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 UBALD2Q8IYN6 164 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 FSCN3Q9NQT6 498 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 TMEM56-RWDD3S4R434 201 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 NCOR1O75376 2440 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 RAMP3O60896 148 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 VDAC2P45880 294 aaPredicted RBP3.3□□□□□ -1.88
SYNE1-207ENST00000367255 SLC36A1Q7Z2H8 476 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 HEYLQ9NQ87 328 aaPredicted RBP3.3□□□□□ -1.88
SYNE1-207ENST00000367255 IGHV1-24A0A0C4DH33 117 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 C7orf77A4D0Y5 90 aa3.3□□□□□ -1.88
SYNE1-207ENST00000367255 TM4SF5O14894 197 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms