RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 IGKV1-33P01594 117 aa11.77□□□□□ -0.53
CTSD-202ENST00000367196 IGHV3-7P01780 117 aa11.77□□□□□ -0.53
CTSD-202ENST00000367196 GAPDHP04406 335 aaKnown RBP11.77□□□□□ -0.53
CTSD-202ENST00000367196 GTF2F2P13984 249 aa11.77□□□□□ -0.53
CTSD-202ENST00000367196 SERPINA2P20848 420 aa11.77□□□□□ -0.53
CTSD-202ENST00000367196 IL3RAP26951 378 aa11.77□□□□□ -0.53
CTSD-202ENST00000367196 ZNF816Q0VGE8 651 aaPredicted RBP11.77□□□□□ -0.53
CTSD-202ENST00000367196 TMEM30BQ3MIR4 351 aa11.77□□□□□ -0.53
CTSD-202ENST00000367196 Q3ZCU0 254 aa11.77□□□□□ -0.53
CTSD-202ENST00000367196 NEK7Q8TDX7 302 aa11.77□□□□□ -0.53
CTSD-202ENST00000367196 MCRIP2Q9BUT9 160 aaKnown RBP11.77□□□□□ -0.53
CTSD-202ENST00000367196 ZFP57Q9NU63 452 aa11.77□□□□□ -0.53
CTSD-202ENST00000367196 BABAM2Q9NXR7 383 aa11.77□□□□□ -0.53
CTSD-202ENST00000367196 ZMAT5Q9UDW3 170 aaKnown RBP11.77□□□□□ -0.53
CTSD-202ENST00000367196 DIMT1Q9UNQ2 313 aaKnown RBP11.77□□□□□ -0.53
CTSD-202ENST00000367196 CCRL2O00421 344 aa11.76□□□□□ -0.53
CTSD-202ENST00000367196 SDCBPO00560 298 aaPredicted RBP11.76□□□□□ -0.53
CTSD-202ENST00000367196 GEMIN2O14893 280 aaKnown RBP11.76□□□□□ -0.53
CTSD-202ENST00000367196 TXNL1O43396 289 aa11.76□□□□□ -0.53
CTSD-202ENST00000367196 MPIG6BO95866 241 aa11.76□□□□□ -0.53
CTSD-202ENST00000367196 RPL23AP62750 156 aaKnown RBP11.76□□□□□ -0.53
CTSD-202ENST00000367196 DCTN2Q13561 401 aaKnown RBP11.76□□□□□ -0.53
CTSD-202ENST00000367196 ATAD3CQ5T2N8 411 aa11.76□□□□□ -0.53
CTSD-202ENST00000367196 SLC35E3Q7Z769 313 aa11.76□□□□□ -0.53
CTSD-202ENST00000367196 C8orf31Q8N9H6 132 aa11.76□□□□□ -0.53
CTSD-202ENST00000367196 SETD9Q8NE22 299 aa11.76□□□□□ -0.53
CTSD-202ENST00000367196 ARL11Q969Q4 196 aa11.76□□□□□ -0.53
CTSD-202ENST00000367196 ZNF184Q99676 751 aaPredicted RBP11.76□□□□□ -0.53
CTSD-202ENST00000367196 C8orf4Q9NR00 106 aa11.76□□□□□ -0.53
CTSD-202ENST00000367196 IGHV1-3A0A0C4DH29 117 aa11.75□□□□□ -0.53
CTSD-202ENST00000367196 NUDT19A8MXV4 375 aa11.75□□□□□ -0.53
CTSD-202ENST00000367196 AIPO00170 330 aa11.75□□□□□ -0.53
CTSD-202ENST00000367196 OGG1O15527 345 aa11.75□□□□□ -0.53
CTSD-202ENST00000367196 ORC5O43913 435 aa11.75□□□□□ -0.53
CTSD-202ENST00000367196 WBP4O75554 376 aaKnown RBP11.75□□□□□ -0.53
CTSD-202ENST00000367196 BAG2O95816 211 aa11.75□□□□□ -0.53
CTSD-202ENST00000367196 ETV1P50549 477 aa11.75□□□□□ -0.53
CTSD-202ENST00000367196 TAS2R43P59537 309 aa11.75□□□□□ -0.53
CTSD-202ENST00000367196 HNF4GQ14541 408 aa11.75□□□□□ -0.53
CTSD-202ENST00000367196 Q499Y3 187 aa11.75□□□□□ -0.53
CTSD-202ENST00000367196 YIF1BQ5BJH7 314 aa11.75□□□□□ -0.53
CTSD-202ENST00000367196 UTF1Q5T230 341 aa11.75□□□□□ -0.53
CTSD-202ENST00000367196 OR2G6Q5TZ20 316 aa11.75□□□□□ -0.53
CTSD-202ENST00000367196 TTC23Q5W5X9 447 aa11.75□□□□□ -0.53
CTSD-202ENST00000367196 XAF1Q6GPH4 301 aa11.75□□□□□ -0.53
CTSD-202ENST00000367196 TRAT1Q6PIZ9 186 aa11.75□□□□□ -0.53
CTSD-202ENST00000367196 C10orf99Q6UWK7 81 aa11.75□□□□□ -0.53
CTSD-202ENST00000367196 MOB3BQ86TA1 216 aa11.75□□□□□ -0.53
CTSD-202ENST00000367196 ZNF329Q86UD4 541 aa11.75□□□□□ -0.53
CTSD-202ENST00000367196 TGIF2LXQ8IUE1 241 aa11.75□□□□□ -0.53
CTSD-202ENST00000367196 IZUMO1Q8IYV9 350 aa11.75□□□□□ -0.53
CTSD-202ENST00000367196 LINC00311Q8N616 119 aa11.75□□□□□ -0.53
CTSD-202ENST00000367196 LINC00482Q8N8I6 264 aa11.75□□□□□ -0.53
CTSD-202ENST00000367196 OR2T10Q8NGZ9 312 aa11.75□□□□□ -0.53
CTSD-202ENST00000367196 MRPS24Q96EL2 167 aaKnown RBP11.75□□□□□ -0.53
CTSD-202ENST00000367196 NCBP2LA6PVI3 153 aaKnown RBP11.74□□□□□ -0.53
CTSD-202ENST00000367196 AP4M1O00189 453 aa11.74□□□□□ -0.53
CTSD-202ENST00000367196 EBAG9O00559 213 aa11.74□□□□□ -0.53
CTSD-202ENST00000367196 SPINT2O43291 252 aa11.74□□□□□ -0.53
CTSD-202ENST00000367196 GPX5O75715 221 aa11.74□□□□□ -0.53
CTSD-202ENST00000367196 IGHG2P01859 326 aa11.74□□□□□ -0.53
CTSD-202ENST00000367196 IGFBP3P17936 291 aaPredicted RBP11.74□□□□□ -0.53
CTSD-202ENST00000367196 FSTP19883 344 aa11.74□□□□□ -0.53
CTSD-202ENST00000367196 EBI3Q14213 229 aa11.74□□□□□ -0.53
CTSD-202ENST00000367196 DIAPH2-AS1Q14236 149 aa11.74□□□□□ -0.53
CTSD-202ENST00000367196 SMN1Q16637 294 aaKnown RBP11.74□□□□□ -0.53
CTSD-202ENST00000367196 SLC22A6Q4U2R8 563 aa11.74□□□□□ -0.53
CTSD-202ENST00000367196 C6orf183Q5T699 404 aa11.74□□□□□ -0.53
CTSD-202ENST00000367196 ZNF497Q6ZNH5 498 aa11.74□□□□□ -0.53
CTSD-202ENST00000367196 OR2W3Q7Z3T1 314 aa11.74□□□□□ -0.53
CTSD-202ENST00000367196 OR8H1Q8NGG4 311 aa11.74□□□□□ -0.53
CTSD-202ENST00000367196 THRSPQ92748 146 aa11.74□□□□□ -0.53
CTSD-202ENST00000367196 GHSRQ92847 366 aa11.74□□□□□ -0.53
CTSD-202ENST00000367196 TMEM80Q96HE8 168 aa11.74□□□□□ -0.53
CTSD-202ENST00000367196 LIN7CQ9NUP9 197 aaKnown RBP11.74□□□□□ -0.53
CTSD-202ENST00000367196 GFOD1Q9NXC2 390 aa11.74□□□□□ -0.53
CTSD-202ENST00000367196 TRBV5-5A0A0J9YX44 114 aa11.73□□□□□ -0.53
CTSD-202ENST00000367196 MCRIP1C9JLW8 97 aa11.73□□□□□ -0.53
CTSD-202ENST00000367196 C15orf65H3BRN8 121 aa11.73□□□□□ -0.53
CTSD-202ENST00000367196 CA11O75493 328 aa11.73□□□□□ -0.53
CTSD-202ENST00000367196 MYCNOSP40205 109 aa11.73□□□□□ -0.53
CTSD-202ENST00000367196 THBS3P49746 956 aa11.73□□□□□ -0.53
CTSD-202ENST00000367196 GP2P55259 537 aaKnown RBP11.73□□□□□ -0.53
CTSD-202ENST00000367196 DMKNQ6E0U4 476 aaPredicted RBP11.73□□□□□ -0.53
CTSD-202ENST00000367196 TEX38Q6PEX7 206 aa11.73□□□□□ -0.53
CTSD-202ENST00000367196 CDH26Q8IXH8 852 aa11.73□□□□□ -0.53
CTSD-202ENST00000367196 MRPL41Q8IXM3 137 aaKnown RBP11.73□□□□□ -0.53
CTSD-202ENST00000367196 STPG2Q8N412 459 aa11.73□□□□□ -0.53
CTSD-202ENST00000367196 NOL4LQ96MY1 436 aaPredicted RBP11.73□□□□□ -0.53
CTSD-202ENST00000367196 GNG12Q9UBI6 72 aa11.73□□□□□ -0.53
CTSD-202ENST00000367196 TRAPPC2LQ9UL33 140 aa11.73□□□□□ -0.53
CTSD-202ENST00000367196 MRPS28Q9Y2Q9 187 aaKnown RBP11.73□□□□□ -0.53
CTSD-202ENST00000367196 TRAV39A0A0B4J263 110 aa11.72□□□□□ -0.53
CTSD-202ENST00000367196 A0A1W2PPE3 182 aa11.72□□□□□ -0.53
CTSD-202ENST00000367196 FAM90A10PA6NDY2 464 aa11.72□□□□□ -0.53
CTSD-202ENST00000367196 FAM90A7PA6NKC0 464 aa11.72□□□□□ -0.53
CTSD-202ENST00000367196 FAM90A23PA8MXZ1 464 aa11.72□□□□□ -0.53
CTSD-202ENST00000367196 CD1BP29016 333 aa11.72□□□□□ -0.53
CTSD-202ENST00000367196 REG1BP48304 166 aa11.72□□□□□ -0.53
CTSD-202ENST00000367196 EGFEM1PQ0D2K5 195 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms