RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 RWDD2BP57060 319 aa0.92□□□□□ -2.26
RNU4-28P-201ENST00000364739 SPAG1Q07617 926 aa0.92□□□□□ -2.26
RNU4-28P-201ENST00000364739 DOC2AQ14183 400 aa0.92□□□□□ -2.26
RNU4-28P-201ENST00000364739 RESP18Q5W5W9 173 aa0.92□□□□□ -2.26
RNU4-28P-201ENST00000364739 OR4A15Q8NGL6 344 aa0.92□□□□□ -2.26
RNU4-28P-201ENST00000364739 OR4X1Q8NH49 305 aa0.92□□□□□ -2.26
RNU4-28P-201ENST00000364739 TOP1MTQ969P6 601 aa0.92□□□□□ -2.26
RNU4-28P-201ENST00000364739 FAM131CQ96AQ9 280 aa0.92□□□□□ -2.26
RNU4-28P-201ENST00000364739 BIRC8Q96P09 236 aa0.92□□□□□ -2.26
RNU4-28P-201ENST00000364739 HSPB9Q9BQS6 159 aa0.92□□□□□ -2.26
RNU4-28P-201ENST00000364739 TAPBPLQ9BX59 468 aa0.92□□□□□ -2.26
RNU4-28P-201ENST00000364739 ANKHQ9HCJ1 492 aa0.92□□□□□ -2.26
RNU4-28P-201ENST00000364739 DENND4BO75064 1496 aaPredicted RBP0.92□□□□□ -2.26
RNU4-28P-201ENST00000364739 NOTCH1P46531 2555 aa0.92□□□□□ -2.26
RNU4-28P-201ENST00000364739 TENM3Q9P273 2699 aa0.91□□□□□ -2.26
RNU4-28P-201ENST00000364739 IGHV3OR15-7A0A075B7D8 119 aa0.91□□□□□ -2.26
RNU4-28P-201ENST00000364739 NAPSAO96009 420 aa0.91□□□□□ -2.26
RNU4-28P-201ENST00000364739 MBP02144 154 aa0.91□□□□□ -2.26
RNU4-28P-201ENST00000364739 ALOX5APP20292 161 aa0.91□□□□□ -2.26
RNU4-28P-201ENST00000364739 ZNF117Q03924 483 aa0.91□□□□□ -2.26
RNU4-28P-201ENST00000364739 PRB3Q04118 309 aaPredicted RBP0.91□□□□□ -2.26
RNU4-28P-201ENST00000364739 HES3Q5TGS1 186 aa0.91□□□□□ -2.26
RNU4-28P-201ENST00000364739 OLIG3Q7RTU3 272 aa0.91□□□□□ -2.26
RNU4-28P-201ENST00000364739 VN1R4Q7Z5H5 301 aa0.91□□□□□ -2.26
RNU4-28P-201ENST00000364739 LINC00523Q86TU6 105 aa0.91□□□□□ -2.26
RNU4-28P-201ENST00000364739 DOK4Q8TEW6 326 aa0.91□□□□□ -2.26
RNU4-28P-201ENST00000364739 MAP1LC3CQ9BXW4 147 aa0.91□□□□□ -2.26
RNU4-28P-201ENST00000364739 FBXL15Q9H469 300 aa0.91□□□□□ -2.26
RNU4-28P-201ENST00000364739 WASHC3Q9Y3C0 194 aa0.91□□□□□ -2.26
RNU4-28P-201ENST00000364739 USP42Q9H9J4 1324 aaKnown RBP0.9□□□□□ -2.26
RNU4-28P-201ENST00000364739 AHNAK2Q8IVF2 5795 aa0.9□□□□□ -2.26
RNU4-28P-201ENST00000364739 IGLV3-9A0A075B6K5 115 aa0.9□□□□□ -2.27
RNU4-28P-201ENST00000364739 TRGV2A0A075B6R0 118 aa0.9□□□□□ -2.27
RNU4-28P-201ENST00000364739 J3QLI3 93 aa0.9□□□□□ -2.27
RNU4-28P-201ENST00000364739 OR4A8P0C604 315 aa0.9□□□□□ -2.27
RNU4-28P-201ENST00000364739 PEBP1P30086 187 aaKnown RBP0.9□□□□□ -2.27
RNU4-28P-201ENST00000364739 RAB38P57729 211 aa0.9□□□□□ -2.27
RNU4-28P-201ENST00000364739 RAB2AP61019 212 aa0.9□□□□□ -2.27
RNU4-28P-201ENST00000364739 HBG1P69891 147 aa0.9□□□□□ -2.27
RNU4-28P-201ENST00000364739 HBG2P69892 147 aa0.9□□□□□ -2.27
RNU4-28P-201ENST00000364739 SUN5Q8TC36 379 aa0.9□□□□□ -2.27
RNU4-28P-201ENST00000364739 CLDN23Q96B33 292 aa0.9□□□□□ -2.27
RNU4-28P-201ENST00000364739 SUCNR1Q9BXA5 334 aa0.9□□□□□ -2.27
RNU4-28P-201ENST00000364739 SPZ1Q9BXG8 430 aa0.9□□□□□ -2.27
RNU4-28P-201ENST00000364739 C16orf95Q9H693 158 aa0.9□□□□□ -2.27
RNU4-28P-201ENST00000364739 MTCH2Q9Y6C9 303 aa0.9□□□□□ -2.27
RNU4-28P-201ENST00000364739 ADAMTSL1Q8N6G6 1762 aa0.89□□□□□ -2.27
RNU4-28P-201ENST00000364739 PRMT5O14744 637 aaPredicted RBP0.89□□□□□ -2.27
RNU4-28P-201ENST00000364739 LTAP01374 205 aa0.89□□□□□ -2.27
RNU4-28P-201ENST00000364739 CPN2P22792 545 aa0.89□□□□□ -2.27
RNU4-28P-201ENST00000364739 CBX5P45973 191 aa0.89□□□□□ -2.27
RNU4-28P-201ENST00000364739 BSPH1Q075Z2 132 aa0.89□□□□□ -2.27
RNU4-28P-201ENST00000364739 OR8G5Q8NG78 346 aa0.89□□□□□ -2.27
RNU4-28P-201ENST00000364739 TMBIM1Q969X1 311 aa0.89□□□□□ -2.27
RNU4-28P-201ENST00000364739 DLG5Q8TDM6 1919 aa0.89□□□□□ -2.27
RNU4-28P-201ENST00000364739 FBN2P35556 2912 aa0.88□□□□□ -2.27
RNU4-28P-201ENST00000364739 SCN9AQ15858 1988 aa0.88□□□□□ -2.27
RNU4-28P-201ENST00000364739 RTTNQ86VV8 2226 aa0.88□□□□□ -2.27
RNU4-28P-201ENST00000364739 A0A1B0GVG6 124 aa0.88□□□□□ -2.27
RNU4-28P-201ENST00000364739 A0A1W2PPV4 95 aa0.88□□□□□ -2.27
RNU4-28P-201ENST00000364739 RNASEK-C17orf49H0YIS7 233 aa0.88□□□□□ -2.27
RNU4-28P-201ENST00000364739 TMEM250H0YL14 139 aa0.88□□□□□ -2.27
RNU4-28P-201ENST00000364739 K7EQS6 105 aa0.88□□□□□ -2.27
RNU4-28P-201ENST00000364739 RFXANKO14593 260 aa0.88□□□□□ -2.27
RNU4-28P-201ENST00000364739 SPNP16150 400 aa0.88□□□□□ -2.27
RNU4-28P-201ENST00000364739 CD36P16671 472 aa0.88□□□□□ -2.27
RNU4-28P-201ENST00000364739 GTF2H1P32780 548 aa0.88□□□□□ -2.27
RNU4-28P-201ENST00000364739 TTPAP49638 278 aa0.88□□□□□ -2.27
RNU4-28P-201ENST00000364739 PRDX1Q06830 199 aaKnown RBP0.88□□□□□ -2.27
RNU4-28P-201ENST00000364739 ACTL10Q5JWF8 245 aa0.88□□□□□ -2.27
RNU4-28P-201ENST00000364739 CCDC121Q6ZUS5 278 aa0.88□□□□□ -2.27
RNU4-28P-201ENST00000364739 OR4X2Q8NGF9 303 aa0.88□□□□□ -2.27
RNU4-28P-201ENST00000364739 OR52K2Q8NGK3 314 aa0.88□□□□□ -2.27
RNU4-28P-201ENST00000364739 OR2AE1Q8NHA4 323 aa0.88□□□□□ -2.27
RNU4-28P-201ENST00000364739 ZNRF2Q8NHG8 242 aa0.88□□□□□ -2.27
RNU4-28P-201ENST00000364739 SPACA4Q8TDM5 124 aa0.88□□□□□ -2.27
RNU4-28P-201ENST00000364739 CDKL2Q92772 493 aa0.88□□□□□ -2.27
RNU4-28P-201ENST00000364739 PITX2Q99697 317 aa0.88□□□□□ -2.27
RNU4-28P-201ENST00000364739 Q9BRP9 147 aa0.88□□□□□ -2.27
RNU4-28P-201ENST00000364739 VAPAQ9P0L0 249 aa0.88□□□□□ -2.27
RNU4-28P-201ENST00000364739 DSCAML1Q8TD84 2053 aa0.88□□□□□ -2.27
RNU4-28P-201ENST00000364739 PTPRJQ12913 1337 aa0.88□□□□□ -2.27
RNU4-28P-201ENST00000364739 DNMT1P26358 1616 aaKnown RBP0.87□□□□□ -2.27
RNU4-28P-201ENST00000364739 ARRDC5A6NEK1 342 aa0.87□□□□□ -2.27
RNU4-28P-201ENST00000364739 FAM183AA6NL82 134 aa0.87□□□□□ -2.27
RNU4-28P-201ENST00000364739 FGF16O43320 207 aa0.87□□□□□ -2.27
RNU4-28P-201ENST00000364739 NQO1P15559 274 aaKnown RBP0.87□□□□□ -2.27
RNU4-28P-201ENST00000364739 PYCR1P32322 319 aa0.87□□□□□ -2.27
RNU4-28P-201ENST00000364739 LPAR6P43657 344 aa0.87□□□□□ -2.27
RNU4-28P-201ENST00000364739 HSPA13P48723 471 aa0.87□□□□□ -2.27
RNU4-28P-201ENST00000364739 HINT1P49773 126 aaPredicted RBP0.87□□□□□ -2.27
RNU4-28P-201ENST00000364739 ATP5J2P56134 94 aa0.87□□□□□ -2.27
RNU4-28P-201ENST00000364739 MP68P56378 58 aa0.87□□□□□ -2.27
RNU4-28P-201ENST00000364739 C6orf183Q5T699 404 aa0.87□□□□□ -2.27
RNU4-28P-201ENST00000364739 OR6N2Q8NGY6 317 aa0.87□□□□□ -2.27
RNU4-28P-201ENST00000364739 TMIGD2Q96BF3 282 aa0.87□□□□□ -2.27
RNU4-28P-201ENST00000364739 ZMYND19Q96E35 227 aaPredicted RBP0.87□□□□□ -2.27
RNU4-28P-201ENST00000364739 COPS4Q9BT78 406 aa0.87□□□□□ -2.27
RNU4-28P-201ENST00000364739 CRLF2Q9HC73 371 aa0.87□□□□□ -2.27
RNU4-28P-201ENST00000364739 VCX3AQ9NNX9 186 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms