RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 PROB1E7EW31 1015 aa11□□□□□ -0.65
VAMP1-201ENST00000361716 AADACP22760 399 aa11□□□□□ -0.65
VAMP1-201ENST00000361716 CHRNB4P30926 498 aa11□□□□□ -0.65
VAMP1-201ENST00000361716 OR8G2PQ6IF36 304 aa11□□□□□ -0.65
VAMP1-201ENST00000361716 CPEB3Q8NE35 698 aaKnown RBP11□□□□□ -0.65
VAMP1-201ENST00000361716 OR10S1Q8NGN2 331 aa11□□□□□ -0.65
VAMP1-201ENST00000361716 OR1L3Q8NH93 324 aa11□□□□□ -0.65
VAMP1-201ENST00000361716 ATP5SQ99766 215 aa11□□□□□ -0.65
VAMP1-201ENST00000361716 KIAA1549LQ6ZVL6 1849 aa11□□□□□ -0.65
VAMP1-201ENST00000361716 ZNF737O75373 536 aa11□□□□□ -0.65
VAMP1-201ENST00000361716 OR10J1P30954 320 aa11□□□□□ -0.65
VAMP1-201ENST00000361716 CNN1P51911 297 aaKnown RBP11□□□□□ -0.65
VAMP1-201ENST00000361716 RAB30Q15771 203 aa11□□□□□ -0.65
VAMP1-201ENST00000361716 RNASE8Q8TDE3 154 aaKnown RBP11□□□□□ -0.65
VAMP1-201ENST00000361716 ZNF721Q8TF20 911 aa11□□□□□ -0.65
VAMP1-201ENST00000361716 ASB10Q8WXI3 467 aa11□□□□□ -0.65
VAMP1-201ENST00000361716 SMDT1Q9H4I9 107 aa11□□□□□ -0.65
VAMP1-201ENST00000361716 SLC25A22Q9H936 323 aa11□□□□□ -0.65
VAMP1-201ENST00000361716 VAX2Q9UIW0 290 aa11□□□□□ -0.65
VAMP1-201ENST00000361716 CLDN16Q9Y5I7 305 aa11□□□□□ -0.65
VAMP1-201ENST00000361716 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11□□□□□ -0.65
VAMP1-201ENST00000361716 C3orf85A0A1B0GTC6 90 aa11□□□□□ -0.65
VAMP1-201ENST00000361716 LTBRP36941 435 aa11□□□□□ -0.65
VAMP1-201ENST00000361716 ARF1P84077 181 aaKnown RBP11□□□□□ -0.65
VAMP1-201ENST00000361716 MMDQ15546 238 aa11□□□□□ -0.65
VAMP1-201ENST00000361716 PIGYQ3MUY2 71 aa11□□□□□ -0.65
VAMP1-201ENST00000361716 CCDC71LQ8N9Z2 235 aa11□□□□□ -0.65
VAMP1-201ENST00000361716 OR10G3Q8NGC4 313 aa11□□□□□ -0.65
VAMP1-201ENST00000361716 COLQQ9Y215 455 aaPredicted RBP11□□□□□ -0.65
VAMP1-201ENST00000361716 NUP210LQ5VU65 1888 aa11□□□□□ -0.65
VAMP1-201ENST00000361716 PRR19A6NJB7 356 aa10.99□□□□□ -0.65
VAMP1-201ENST00000361716 TOX3O15405 576 aaPredicted RBP10.99□□□□□ -0.65
VAMP1-201ENST00000361716 TLX3O43711 291 aaPredicted RBP10.99□□□□□ -0.65
VAMP1-201ENST00000361716 SRSF10O75494 262 aaKnown RBP10.99□□□□□ -0.65
VAMP1-201ENST00000361716 DXOO77932 396 aaKnown RBP10.99□□□□□ -0.65
VAMP1-201ENST00000361716 PNRC1Q12796 327 aaPredicted RBP10.99□□□□□ -0.65
VAMP1-201ENST00000361716 TCF23Q7RTU1 214 aa10.99□□□□□ -0.65
VAMP1-201ENST00000361716 OR1K1Q8NGR3 316 aa10.99□□□□□ -0.65
VAMP1-201ENST00000361716 C1orf147Q96MC9 270 aaPredicted RBP10.99□□□□□ -0.65
VAMP1-201ENST00000361716 CIB3Q96Q77 187 aaPredicted RBP10.99□□□□□ -0.65
VAMP1-201ENST00000361716 PRDM6Q9NQX0 595 aa10.99□□□□□ -0.65
VAMP1-201ENST00000361716 P4HTMQ9NXG6 502 aa10.99□□□□□ -0.65
VAMP1-201ENST00000361716 MAP1LC3B2A6NCE7 125 aa10.99□□□□□ -0.65
VAMP1-201ENST00000361716 PIGCQ92535 297 aa10.99□□□□□ -0.65
VAMP1-201ENST00000361716 SPOCK3Q9BQ16 436 aa10.99□□□□□ -0.65
VAMP1-201ENST00000361716 HSPB9Q9BQS6 159 aa10.99□□□□□ -0.65
VAMP1-201ENST00000361716 MAP1LC3BQ9GZQ8 125 aa10.99□□□□□ -0.65
VAMP1-201ENST00000361716 IFNA1P01562 189 aa10.99□□□□□ -0.65
VAMP1-201ENST00000361716 IGHV4-34P06331 123 aa10.99□□□□□ -0.65
VAMP1-201ENST00000361716 UBE2G2P60604 165 aa10.99□□□□□ -0.65
VAMP1-201ENST00000361716 HIST1H3AP68431 136 aa10.99□□□□□ -0.65
VAMP1-201ENST00000361716 MRPS11P82912 194 aaKnown RBP10.99□□□□□ -0.65
VAMP1-201ENST00000361716 C1orf194Q5T5A4 169 aa10.99□□□□□ -0.65
VAMP1-201ENST00000361716 BAGE3Q86Y29 109 aa10.99□□□□□ -0.65
VAMP1-201ENST00000361716 BAGE2Q86Y30 109 aa10.99□□□□□ -0.65
VAMP1-201ENST00000361716 LYPD6Q86Y78 171 aa10.99□□□□□ -0.65
VAMP1-201ENST00000361716 ADIPOR1Q96A54 375 aa10.99□□□□□ -0.65
VAMP1-201ENST00000361716 ROS1P08922 2347 aa10.98□□□□□ -0.65
VAMP1-201ENST00000361716 TRBV24-1A0A075B6N3 115 aa10.98□□□□□ -0.65
VAMP1-201ENST00000361716 NPIPA2E9PIF3 369 aa10.98□□□□□ -0.65
VAMP1-201ENST00000361716 NPIPA3F8WFD2 350 aa10.98□□□□□ -0.65
VAMP1-201ENST00000361716 TP53I11O14683 189 aa10.98□□□□□ -0.65
VAMP1-201ENST00000361716 NUPR1O60356 82 aa10.98□□□□□ -0.65
VAMP1-201ENST00000361716 SPINK4O60575 86 aa10.98□□□□□ -0.65
VAMP1-201ENST00000361716 PITX3O75364 302 aa10.98□□□□□ -0.65
VAMP1-201ENST00000361716 HOXA6P31267 233 aa10.98□□□□□ -0.65
VAMP1-201ENST00000361716 C17orf67Q0P5P2 114 aa10.98□□□□□ -0.65
VAMP1-201ENST00000361716 VHLLQ6RSH7 139 aa10.98□□□□□ -0.65
VAMP1-201ENST00000361716 OR1L6Q8NGR2 347 aa10.98□□□□□ -0.65
VAMP1-201ENST00000361716 Q9N2K0 584 aa10.98□□□□□ -0.65
VAMP1-201ENST00000361716 ATG2AQ2TAZ0 1938 aa10.98□□□□□ -0.65
VAMP1-201ENST00000361716 EP300Q09472 2414 aaPredicted RBP10.98□□□□□ -0.65
VAMP1-201ENST00000361716 CEACAM18A8MTB9 384 aa10.98□□□□□ -0.65
VAMP1-201ENST00000361716 M0QZK8 103 aa10.98□□□□□ -0.65
VAMP1-201ENST00000361716 GGCTO75223 188 aaKnown RBP10.98□□□□□ -0.65
VAMP1-201ENST00000361716 DEFA4P12838 97 aa10.98□□□□□ -0.65
VAMP1-201ENST00000361716 CCKARP32238 428 aa10.98□□□□□ -0.65
VAMP1-201ENST00000361716 KIAA0895LQ68EN5 471 aa10.98□□□□□ -0.65
VAMP1-201ENST00000361716 ZNF573Q86YE8 665 aa10.98□□□□□ -0.65
VAMP1-201ENST00000361716 MCEMP1Q8IX19 187 aa10.98□□□□□ -0.65
VAMP1-201ENST00000361716 ST6GALNAC3Q8NDV1 305 aa10.98□□□□□ -0.65
VAMP1-201ENST00000361716 GATAD1Q8WUU5 269 aa10.98□□□□□ -0.65
VAMP1-201ENST00000361716 LIPHQ8WWY8 451 aa10.98□□□□□ -0.65
VAMP1-201ENST00000361716 C22orf15Q8WYQ4 148 aa10.98□□□□□ -0.65
VAMP1-201ENST00000361716 DEFB126Q9BYW3 111 aa10.98□□□□□ -0.65
VAMP1-201ENST00000361716 LHFPL6Q9Y693 200 aa10.98□□□□□ -0.65
VAMP1-201ENST00000361716 GCH1P30793 250 aa10.97□□□□□ -0.65
VAMP1-201ENST00000361716 SPANXN5Q5MJ07 72 aa10.97□□□□□ -0.65
VAMP1-201ENST00000361716 FNDC7Q5VTL7 733 aa10.97□□□□□ -0.65
VAMP1-201ENST00000361716 SLC25A26Q70HW3 274 aa10.97□□□□□ -0.65
VAMP1-201ENST00000361716 RTL10Q7L3V2 364 aa10.97□□□□□ -0.65
VAMP1-201ENST00000361716 TBC1D26Q86UD7 250 aa10.97□□□□□ -0.65
VAMP1-201ENST00000361716 OR1N1Q8NGS0 311 aa10.97□□□□□ -0.65
VAMP1-201ENST00000361716 CMTM2Q8TAZ6 248 aa10.97□□□□□ -0.65
VAMP1-201ENST00000361716 RHBDD1Q8TEB9 315 aa10.97□□□□□ -0.65
VAMP1-201ENST00000361716 IL1F10Q8WWZ1 152 aa10.97□□□□□ -0.65
VAMP1-201ENST00000361716 BORCS8Q96FH0 119 aa10.97□□□□□ -0.65
VAMP1-201ENST00000361716 IMMP2LQ96T52 175 aa10.97□□□□□ -0.65
VAMP1-201ENST00000361716 SPIN2AQ99865 258 aa10.97□□□□□ -0.65
VAMP1-201ENST00000361716 GABRG3Q99928 467 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms