RNA–Protein interactions for RNA: ENST00000361543.3

SGMS1-201, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best) BASIC

Gene SGMS1, Length 1,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-201ENST00000361543 NDNFQ8TB73 568 aa6.19□□□□□ -1.42
SGMS1-201ENST00000361543 PIFOQ8TCI5 191 aa6.19□□□□□ -1.42
SGMS1-201ENST00000361543 MALSU1Q96EH3 234 aa6.19□□□□□ -1.42
SGMS1-201ENST00000361543 COQ2Q96H96 371 aa6.19□□□□□ -1.42
SGMS1-201ENST00000361543 KCTD7Q96MP8 289 aa6.19□□□□□ -1.42
SGMS1-201ENST00000361543 NKX3-1Q99801 234 aaPredicted RBP6.19□□□□□ -1.42
SGMS1-201ENST00000361543 URM1Q9BTM9 101 aaKnown RBP6.19□□□□□ -1.42
SGMS1-201ENST00000361543 BARHL1Q9BZE3 327 aa6.19□□□□□ -1.42
SGMS1-201ENST00000361543 NPFFR1Q9GZQ6 430 aa6.19□□□□□ -1.42
SGMS1-201ENST00000361543 PPIL3Q9H2H8 161 aaKnown RBP6.19□□□□□ -1.42
SGMS1-201ENST00000361543 NCOR1P1Q9H4R4 102 aa6.19□□□□□ -1.42
SGMS1-201ENST00000361543 RANBP3Q9H6Z4 567 aaPredicted RBP6.19□□□□□ -1.42
SGMS1-201ENST00000361543 PLGRKTQ9HBL7 147 aa6.19□□□□□ -1.42
SGMS1-201ENST00000361543 ING3Q9NXR8 418 aa6.19□□□□□ -1.42
SGMS1-201ENST00000361543 FBLN5Q9UBX5 448 aa6.19□□□□□ -1.42
SGMS1-201ENST00000361543 TCF19Q9Y242 345 aa6.19□□□□□ -1.42
SGMS1-201ENST00000361543 ST3GAL6Q9Y274 331 aa6.19□□□□□ -1.42
SGMS1-201ENST00000361543 MINOS1-NBL1R4GNA1 71 aa6.19□□□□□ -1.42
SGMS1-201ENST00000361543 DNAH3Q8TD57 4116 aa6.18□□□□□ -1.42
SGMS1-201ENST00000361543 FAM172BPA6NC97 362 aa6.18□□□□□ -1.42
SGMS1-201ENST00000361543 MAGEA13PA6NCF6 341 aa6.18□□□□□ -1.42
SGMS1-201ENST00000361543 F2RL2O00254 374 aa6.18□□□□□ -1.42
SGMS1-201ENST00000361543 SLC17A2O00624 439 aa6.18□□□□□ -1.42
SGMS1-201ENST00000361543 SLC22A1O15245 554 aa6.18□□□□□ -1.42
SGMS1-201ENST00000361543 FBXO24O75426 580 aa6.18□□□□□ -1.42
SGMS1-201ENST00000361543 CA11O75493 328 aa6.18□□□□□ -1.42
SGMS1-201ENST00000361543 CRTAPO75718 401 aaPredicted RBP6.18□□□□□ -1.42
SGMS1-201ENST00000361543 MMP23AO75900 390 aa6.18□□□□□ -1.42
SGMS1-201ENST00000361543 SCGNO76038 276 aa6.18□□□□□ -1.42
SGMS1-201ENST00000361543 OR7C1O76099 320 aaPredicted RBP6.18□□□□□ -1.42
SGMS1-201ENST00000361543 HTR3BO95264 441 aa6.18□□□□□ -1.42
SGMS1-201ENST00000361543 ARSBP15848 533 aa6.18□□□□□ -1.42
SGMS1-201ENST00000361543 CD36P16671 472 aa6.18□□□□□ -1.42
SGMS1-201ENST00000361543 JUNBP17275 347 aaPredicted RBP6.18□□□□□ -1.42
SGMS1-201ENST00000361543 GLP1RP43220 463 aa6.18□□□□□ -1.42
SGMS1-201ENST00000361543 OR3A4PP47883 348 aa6.18□□□□□ -1.42
SGMS1-201ENST00000361543 RAB13P51153 203 aa6.18□□□□□ -1.42
SGMS1-201ENST00000361543 EFNB2P52799 333 aa6.18□□□□□ -1.42
SGMS1-201ENST00000361543 RBM11P57052 281 aaKnown RBP6.18□□□□□ -1.42
SGMS1-201ENST00000361543 FABP5Q01469 135 aa6.18□□□□□ -1.42
SGMS1-201ENST00000361543 PAX5Q02548 391 aa6.18□□□□□ -1.42
SGMS1-201ENST00000361543 SSX1Q16384 188 aa6.18□□□□□ -1.42
SGMS1-201ENST00000361543 PIGYQ3MUY2 71 aa6.18□□□□□ -1.42
SGMS1-201ENST00000361543 C11orf88Q6PI97 169 aa6.18□□□□□ -1.42
SGMS1-201ENST00000361543 BAIAP2L2Q6UXY1 529 aa6.18□□□□□ -1.42
SGMS1-201ENST00000361543 TMEM91Q6ZNR0 172 aa6.18□□□□□ -1.42
SGMS1-201ENST00000361543 OR2W3Q7Z3T1 314 aa6.18□□□□□ -1.42
SGMS1-201ENST00000361543 LRRTM1Q86UE6 522 aa6.18□□□□□ -1.42
SGMS1-201ENST00000361543 TMEM219Q86XT9 240 aa6.18□□□□□ -1.42
SGMS1-201ENST00000361543 OR4P4Q8NGL7 312 aa6.18□□□□□ -1.42
SGMS1-201ENST00000361543 OR10K1Q8NGX5 313 aa6.18□□□□□ -1.42
SGMS1-201ENST00000361543 OR2T6Q8NHC8 308 aa6.18□□□□□ -1.42
SGMS1-201ENST00000361543 CORO2AQ92828 525 aa6.18□□□□□ -1.42
SGMS1-201ENST00000361543 ORAI1Q96D31 301 aa6.18□□□□□ -1.42
SGMS1-201ENST00000361543 MRPS26Q9BYN8 205 aaKnown RBP6.18□□□□□ -1.42
SGMS1-201ENST00000361543 TAS2R3Q9NYW6 316 aa6.18□□□□□ -1.42
SGMS1-201ENST00000361543 OR6C3Q9NZP0 311 aa6.18□□□□□ -1.42
SGMS1-201ENST00000361543 PITPNC1Q9UKF7 332 aa6.18□□□□□ -1.42
SGMS1-201ENST00000361543 SIGLEC9Q9Y336 463 aa6.18□□□□□ -1.42
SGMS1-201ENST00000361543 HILPDAQ9Y5L2 63 aa6.18□□□□□ -1.42
SGMS1-201ENST00000361543 V9GY05 133 aa6.18□□□□□ -1.42
SGMS1-201ENST00000361543 MEIKINA0A087WXM9 373 aa6.17□□□□□ -1.42
SGMS1-201ENST00000361543 TRAV24A0A0B4J272 114 aa6.17□□□□□ -1.42
SGMS1-201ENST00000361543 A6NDX4 124 aa6.17□□□□□ -1.42
SGMS1-201ENST00000361543 ZNF729A6NN14 1252 aaPredicted RBP6.17□□□□□ -1.42
SGMS1-201ENST00000361543 AIPO00170 330 aa6.17□□□□□ -1.42
SGMS1-201ENST00000361543 CDRT1O95170 752 aa6.17□□□□□ -1.42
SGMS1-201ENST00000361543 GHRHP01286 108 aa6.17□□□□□ -1.42
SGMS1-201ENST00000361543 CD37P11049 281 aa6.17□□□□□ -1.42
SGMS1-201ENST00000361543 MGMTP16455 207 aa6.17□□□□□ -1.42
SGMS1-201ENST00000361543 RAB3BP20337 219 aa6.17□□□□□ -1.42
SGMS1-201ENST00000361543 SERPINA2P20848 420 aa6.17□□□□□ -1.42
SGMS1-201ENST00000361543 HTR1DP28221 377 aa6.17□□□□□ -1.42
SGMS1-201ENST00000361543 GDNFP39905 211 aa6.17□□□□□ -1.42
SGMS1-201ENST00000361543 KIR2DS4P43632 304 aa6.17□□□□□ -1.42
SGMS1-201ENST00000361543 SMCPP49901 116 aaPredicted RBP6.17□□□□□ -1.42
SGMS1-201ENST00000361543 DYNLT3P51808 116 aa6.17□□□□□ -1.42
SGMS1-201ENST00000361543 SCAND1P57086 179 aa6.17□□□□□ -1.42
SGMS1-201ENST00000361543 TNP2Q05952 138 aa6.17□□□□□ -1.42
SGMS1-201ENST00000361543 ARL6IP1Q15041 203 aa6.17□□□□□ -1.42
SGMS1-201ENST00000361543 C2orf68Q2NKX9 166 aa6.17□□□□□ -1.42
SGMS1-201ENST00000361543 TMEM30BQ3MIR4 351 aa6.17□□□□□ -1.42
SGMS1-201ENST00000361543 FAM27D1Q5T7N8 215 aa6.17□□□□□ -1.42
SGMS1-201ENST00000361543 C22orf42Q6IC83 251 aa6.17□□□□□ -1.42
SGMS1-201ENST00000361543 CCBE1Q6UXH8 406 aaPredicted RBP6.17□□□□□ -1.42
SGMS1-201ENST00000361543 RTN4RL2Q86UN3 420 aa6.17□□□□□ -1.42
SGMS1-201ENST00000361543 LYPD6Q86Y78 171 aa6.17□□□□□ -1.42
SGMS1-201ENST00000361543 ABHD12Q8N2K0 398 aa6.17□□□□□ -1.42
SGMS1-201ENST00000361543 KLHDC1Q8N7A1 406 aa6.17□□□□□ -1.42
SGMS1-201ENST00000361543 ZNF565Q8N9K5 539 aa6.17□□□□□ -1.42
SGMS1-201ENST00000361543 OR4D6Q8NGJ1 314 aa6.17□□□□□ -1.42
SGMS1-201ENST00000361543 ZNF596Q8TC21 504 aa6.17□□□□□ -1.42
SGMS1-201ENST00000361543 NEDD4LQ96PU5 975 aa6.17□□□□□ -1.42
SGMS1-201ENST00000361543 TMEM59Q9BXS4 323 aa6.17□□□□□ -1.42
SGMS1-201ENST00000361543 MMP27Q9H306 513 aa6.17□□□□□ -1.42
SGMS1-201ENST00000361543 ZNF702PQ9H963 129 aa6.17□□□□□ -1.42
SGMS1-201ENST00000361543 ZNF286AQ9HBT8 521 aa6.17□□□□□ -1.42
SGMS1-201ENST00000361543 TXNL4BQ9NX01 149 aaKnown RBP6.17□□□□□ -1.42
SGMS1-201ENST00000361543 STEAP1Q9UHE8 339 aa6.17□□□□□ -1.42
SGMS1-201ENST00000361543 KIF25Q9UIL4 384 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms