RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 HMGN3Q15651 99 aa19.22■□□□□ 0.67
LDB1-201ENST00000361198 INO80CQ6PI98 192 aaPredicted RBP19.22■□□□□ 0.67
LDB1-201ENST00000361198 CLEC9AQ6UXN8 241 aa19.22■□□□□ 0.67
LDB1-201ENST00000361198 SLC25A40Q8TBP6 338 aa19.22■□□□□ 0.67
LDB1-201ENST00000361198 GLAP06280 429 aa19.22■□□□□ 0.67
LDB1-201ENST00000361198 SNCAP37840 140 aa19.22■□□□□ 0.67
LDB1-201ENST00000361198 AVPI1Q5T686 147 aa19.22■□□□□ 0.67
LDB1-201ENST00000361198 LINC00596Q86U02 117 aa19.22■□□□□ 0.67
LDB1-201ENST00000361198 RDH5Q92781 318 aa19.22■□□□□ 0.67
LDB1-201ENST00000361198 FBXO9Q9UK97 447 aaPredicted RBP19.22■□□□□ 0.67
LDB1-201ENST00000361198 AKAP13Q12802 2813 aa19.22■□□□□ 0.67
LDB1-201ENST00000361198 MGAQ8IWI9 3026 aa19.21■□□□□ 0.67
LDB1-201ENST00000361198 GVINP1Q7Z2Y8 2422 aa19.21■□□□□ 0.67
LDB1-201ENST00000361198 TRAV24A0A0B4J272 114 aa19.21■□□□□ 0.67
LDB1-201ENST00000361198 COLCA2A8K830 154 aa19.21■□□□□ 0.67
LDB1-201ENST00000361198 J3QT63 122 aa19.21■□□□□ 0.67
LDB1-201ENST00000361198 CNOT4O95628 575 aaKnown RBP19.21■□□□□ 0.67
LDB1-201ENST00000361198 TSPAN15O95858 294 aa19.21■□□□□ 0.67
LDB1-201ENST00000361198 C20orf204Q6ZNR8 217 aa19.21■□□□□ 0.67
LDB1-201ENST00000361198 OR4D5Q8NGN0 318 aa19.21■□□□□ 0.67
LDB1-201ENST00000361198 SPACA1Q9HBV2 294 aa19.21■□□□□ 0.67
LDB1-201ENST00000361198 DLL3Q9NYJ7 618 aa19.21■□□□□ 0.67
LDB1-201ENST00000361198 PHF1O43189 567 aaPredicted RBP19.21■□□□□ 0.67
LDB1-201ENST00000361198 AGFG2O95081 481 aa19.21■□□□□ 0.67
LDB1-201ENST00000361198 COX5AP20674 150 aa19.21■□□□□ 0.67
LDB1-201ENST00000361198 LMO1P25800 156 aa19.21■□□□□ 0.67
LDB1-201ENST00000361198 GNRHRP30968 328 aa19.21■□□□□ 0.67
LDB1-201ENST00000361198 ACSF3Q4G176 576 aaPredicted RBP19.21■□□□□ 0.67
LDB1-201ENST00000361198 OR1J1Q8NGS3 322 aa19.21■□□□□ 0.67
LDB1-201ENST00000361198 AKR1E2Q96JD6 320 aa19.21■□□□□ 0.67
LDB1-201ENST00000361198 RTL8AQ9BWD3 113 aa19.21■□□□□ 0.67
LDB1-201ENST00000361198 BIN3Q9NQY0 253 aa19.21■□□□□ 0.67
LDB1-201ENST00000361198 SMCO4Q9NRQ5 59 aa19.21■□□□□ 0.67
LDB1-201ENST00000361198 ATP23Q9Y6H3 246 aa19.21■□□□□ 0.67
LDB1-201ENST00000361198 MUC6Q6W4X9 2439 aa19.21■□□□□ 0.67
LDB1-201ENST00000361198 TK1P04183 234 aa19.2■□□□□ 0.66
LDB1-201ENST00000361198 RAB5CP51148 216 aa19.2■□□□□ 0.66
LDB1-201ENST00000361198 MIDNQ504T8 468 aa19.2■□□□□ 0.66
LDB1-201ENST00000361198 KDF1Q8NAX2 398 aaPredicted RBP19.2■□□□□ 0.66
LDB1-201ENST00000361198 SECTM1Q8WVN6 248 aa19.2■□□□□ 0.66
LDB1-201ENST00000361198 TP53RKQ96S44 253 aa19.2■□□□□ 0.66
LDB1-201ENST00000361198 LUZP4Q9P127 313 aa19.2■□□□□ 0.66
LDB1-201ENST00000361198 IGKV1-6A0A0C4DH72 117 aa19.2■□□□□ 0.66
LDB1-201ENST00000361198 TRDCB7Z8K6 153 aa19.2■□□□□ 0.66
LDB1-201ENST00000361198 TM4SF5O14894 197 aa19.2■□□□□ 0.66
LDB1-201ENST00000361198 FAM185AQ8N0U4 392 aa19.2■□□□□ 0.66
LDB1-201ENST00000361198 ZADH2Q8N4Q0 377 aa19.2■□□□□ 0.66
LDB1-201ENST00000361198 SLC35G3Q8N808 338 aa19.2■□□□□ 0.66
LDB1-201ENST00000361198 WDR31Q8NA23 367 aa19.2■□□□□ 0.66
LDB1-201ENST00000361198 MRPL30Q8TCC3 161 aaKnown RBP19.2■□□□□ 0.66
LDB1-201ENST00000361198 EGLN1Q9GZT9 426 aa19.2■□□□□ 0.66
LDB1-201ENST00000361198 DKK4Q9UBT3 224 aa19.2■□□□□ 0.66
LDB1-201ENST00000361198 MPPED1O15442 326 aa19.19■□□□□ 0.66
LDB1-201ENST00000361198 IGKV3-15P01624 115 aa19.19■□□□□ 0.66
LDB1-201ENST00000361198 FOLR2P14207 255 aa19.19■□□□□ 0.66
LDB1-201ENST00000361198 RAC2P15153 192 aa19.19■□□□□ 0.66
LDB1-201ENST00000361198 PSG7Q13046 419 aa19.19■□□□□ 0.66
LDB1-201ENST00000361198 SCCPDHQ8NBX0 429 aa19.19■□□□□ 0.66
LDB1-201ENST00000361198 PARP12Q9H0J9 701 aaKnown RBP19.19■□□□□ 0.66
LDB1-201ENST00000361198 C11orf1Q9H5F2 150 aa19.19■□□□□ 0.66
LDB1-201ENST00000361198 KIR2DS1A0A191URI9 304 aa19.18■□□□□ 0.66
LDB1-201ENST00000361198 SLC34A2O95436 690 aa19.18■□□□□ 0.66
LDB1-201ENST00000361198 CDS2O95674 445 aa19.18■□□□□ 0.66
LDB1-201ENST00000361198 CBR1P16152 277 aa19.18■□□□□ 0.66
LDB1-201ENST00000361198 KIR2DS4P43632 304 aa19.18■□□□□ 0.66
LDB1-201ENST00000361198 KCNJ3P48549 501 aa19.18■□□□□ 0.66
LDB1-201ENST00000361198 SRPXP78539 464 aa19.18■□□□□ 0.66
LDB1-201ENST00000361198 KIR2DS1Q14954 304 aa19.18■□□□□ 0.66
LDB1-201ENST00000361198 RTP5Q14D33 572 aa19.18■□□□□ 0.66
LDB1-201ENST00000361198 GTF3AQ92664 365 aaKnown RBP19.18■□□□□ 0.66
LDB1-201ENST00000361198 RCL1Q9Y2P8 373 aaKnown RBP19.18■□□□□ 0.66
LDB1-201ENST00000361198 IGHV3-64DA0A0J9YX35 117 aa19.18■□□□□ 0.66
LDB1-201ENST00000361198 C3orf85A0A1B0GTC6 90 aa19.18■□□□□ 0.66
LDB1-201ENST00000361198 LRP5LA4QPB2 252 aa19.18■□□□□ 0.66
LDB1-201ENST00000361198 HOXB1P14653 301 aaPredicted RBP19.18■□□□□ 0.66
LDB1-201ENST00000361198 HOXC12P31275 282 aa19.18■□□□□ 0.66
LDB1-201ENST00000361198 NHLH2Q02577 135 aa19.18■□□□□ 0.66
LDB1-201ENST00000361198 TMEM222Q9H0R3 208 aa19.18■□□□□ 0.66
LDB1-201ENST00000361198 STRAPQ9Y3F4 350 aaKnown RBP19.18■□□□□ 0.66
LDB1-201ENST00000361198 AHRRA9YTQ3 701 aa19.17■□□□□ 0.66
LDB1-201ENST00000361198 ZNF44P15621 663 aa19.17■□□□□ 0.66
LDB1-201ENST00000361198 MPV17P39210 176 aa19.17■□□□□ 0.66
LDB1-201ENST00000361198 ZNF154Q13106 437 aa19.17■□□□□ 0.66
LDB1-201ENST00000361198 GUK1Q16774 197 aa19.17■□□□□ 0.66
LDB1-201ENST00000361198 SHEQ5VZ18 495 aa19.17■□□□□ 0.66
LDB1-201ENST00000361198 Q6P435 159 aa19.17■□□□□ 0.66
LDB1-201ENST00000361198 RIMS4Q9H426 269 aaPredicted RBP19.17■□□□□ 0.66
LDB1-201ENST00000361198 ESRP2Q9H6T0 727 aaKnown RBP19.17■□□□□ 0.66
LDB1-201ENST00000361198 PLSCR4Q9NRQ2 329 aa19.17■□□□□ 0.66
LDB1-201ENST00000361198 IGKV1D-13A0A0B4J2D9 117 aa19.17■□□□□ 0.66
LDB1-201ENST00000361198 IQCF6A8MYZ5 107 aa19.17■□□□□ 0.66
LDB1-201ENST00000361198 TNFSF13O75888 250 aa19.17■□□□□ 0.66
LDB1-201ENST00000361198 IGKV1-13P0DP09 117 aa19.17■□□□□ 0.66
LDB1-201ENST00000361198 PPT1P50897 306 aa19.17■□□□□ 0.66
LDB1-201ENST00000361198 C15orf54Q8N8G6 183 aa19.17■□□□□ 0.66
LDB1-201ENST00000361198 KLF14Q8TD94 323 aaPredicted RBP19.17■□□□□ 0.66
LDB1-201ENST00000361198 BOD1Q96IK1 185 aa19.17■□□□□ 0.66
LDB1-201ENST00000361198 TMEM56Q96MV1 263 aa19.17■□□□□ 0.66
LDB1-201ENST00000361198 USB1Q9BQ65 265 aaKnown RBP19.17■□□□□ 0.66
LDB1-201ENST00000361198 TMEM56-RWDD3S4R434 201 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms