RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 PRSS8Q16651 343 aa14.08□□□□□ -0.15
COL18A1-203ENST00000359759 DEFB124Q8NES8 71 aa14.08□□□□□ -0.15
COL18A1-203ENST00000359759 CHAC2Q8WUX2 184 aa14.08□□□□□ -0.15
COL18A1-203ENST00000359759 MIXL1Q9H2W2 232 aa14.08□□□□□ -0.15
COL18A1-203ENST00000359759 CDX4O14627 284 aaPredicted RBP14.08□□□□□ -0.16
COL18A1-203ENST00000359759 UBE2L6O14933 153 aa14.08□□□□□ -0.16
COL18A1-203ENST00000359759 RELBQ01201 579 aa14.08□□□□□ -0.16
COL18A1-203ENST00000359759 SKP2Q13309 424 aa14.08□□□□□ -0.16
COL18A1-203ENST00000359759 C1QL3Q5VWW1 255 aa14.08□□□□□ -0.16
COL18A1-203ENST00000359759 SMOC1Q9H4F8 434 aa14.08□□□□□ -0.16
COL18A1-203ENST00000359759 TINAGQ9UJW2 476 aa14.08□□□□□ -0.16
COL18A1-203ENST00000359759 ZNHIT1O43257 154 aa14.08□□□□□ -0.16
COL18A1-203ENST00000359759 HIST1H1EP10412 219 aaKnown RBP14.08□□□□□ -0.16
COL18A1-203ENST00000359759 KIR2DL1P43626 348 aaPredicted RBP14.08□□□□□ -0.16
COL18A1-203ENST00000359759 KIR2DL2P43627 348 aaPredicted RBP14.08□□□□□ -0.16
COL18A1-203ENST00000359759 PWWP2BQ6NUJ5 590 aa14.08□□□□□ -0.16
COL18A1-203ENST00000359759 FAM216AQ8WUB2 273 aa14.08□□□□□ -0.16
COL18A1-203ENST00000359759 HARBI1Q96MB7 349 aa14.08□□□□□ -0.16
COL18A1-203ENST00000359759 HOXA4Q00056 320 aaPredicted RBP14.08□□□□□ -0.16
COL18A1-203ENST00000359759 AESQ08117 197 aa14.08□□□□□ -0.16
COL18A1-203ENST00000359759 MRPL30Q8TCC3 161 aaKnown RBP14.08□□□□□ -0.16
COL18A1-203ENST00000359759 ZNF764Q96H86 408 aaPredicted RBP14.08□□□□□ -0.16
COL18A1-203ENST00000359759 DMKNQ6E0U4 476 aaPredicted RBP14.08□□□□□ -0.16
COL18A1-203ENST00000359759 SIRT7Q9NRC8 400 aa14.08□□□□□ -0.16
COL18A1-203ENST00000359759 F11RQ9Y624 299 aaKnown RBP14.08□□□□□ -0.16
COL18A1-203ENST00000359759 OR51B2Q9Y5P1 312 aa14.07□□□□□ -0.16
COL18A1-203ENST00000359759 ADAMTSL3P82987 1691 aa14.07□□□□□ -0.16
COL18A1-203ENST00000359759 IGKV3D-11A0A0A0MRZ8 115 aa14.07□□□□□ -0.16
COL18A1-203ENST00000359759 CTDSPLO15194 276 aa14.07□□□□□ -0.16
COL18A1-203ENST00000359759 IGKV3-11P04433 115 aa14.07□□□□□ -0.16
COL18A1-203ENST00000359759 SLC25A33Q9BSK2 321 aa14.07□□□□□ -0.16
COL18A1-203ENST00000359759 ZNF385CQ66K41 422 aaPredicted RBP14.07□□□□□ -0.16
COL18A1-203ENST00000359759 PTPMT1Q8WUK0 201 aaPredicted RBP14.07□□□□□ -0.16
COL18A1-203ENST00000359759 MRGPRGQ86SM5 289 aa14.07□□□□□ -0.16
COL18A1-203ENST00000359759 ADTRPQ96IZ2 230 aa14.07□□□□□ -0.16
COL18A1-203ENST00000359759 P2RX4Q99571 388 aa14.07□□□□□ -0.16
COL18A1-203ENST00000359759 INSIG2Q9Y5U4 225 aa14.07□□□□□ -0.16
COL18A1-203ENST00000359759 SCAND1P57086 179 aa14.07□□□□□ -0.16
COL18A1-203ENST00000359759 VSTM2AQ8TAG5 236 aa14.07□□□□□ -0.16
COL18A1-203ENST00000359759 SSC5DA1L4H1 1573 aa14.07□□□□□ -0.16
COL18A1-203ENST00000359759 NSUN5P2Q63ZY6 315 aa14.06□□□□□ -0.16
COL18A1-203ENST00000359759 OR4D11Q8NGI4 311 aa14.06□□□□□ -0.16
COL18A1-203ENST00000359759 IL36RNQ9UBH0 155 aa14.06□□□□□ -0.16
COL18A1-203ENST00000359759 KIAA0040Q15053 153 aa14.06□□□□□ -0.16
COL18A1-203ENST00000359759 FAM74A3Q4VXF1 159 aa14.06□□□□□ -0.16
COL18A1-203ENST00000359759 HIKESHIQ53FT3 197 aa14.06□□□□□ -0.16
COL18A1-203ENST00000359759 FAHD2BQ6P2I3 314 aaPredicted RBP14.06□□□□□ -0.16
COL18A1-203ENST00000359759 KLRB1Q12918 225 aa14.06□□□□□ -0.16
COL18A1-203ENST00000359759 KRTCAP3Q53RY4 240 aa14.06□□□□□ -0.16
COL18A1-203ENST00000359759 TEPPQ6URK8 271 aa14.06□□□□□ -0.16
COL18A1-203ENST00000359759 ZFP64Q9NPA5 681 aa14.06□□□□□ -0.16
COL18A1-203ENST00000359759 FFAR1O14842 300 aa14.06□□□□□ -0.16
COL18A1-203ENST00000359759 GCGP01275 180 aa14.06□□□□□ -0.16
COL18A1-203ENST00000359759 MAGEA5P43359 124 aa14.06□□□□□ -0.16
COL18A1-203ENST00000359759 C19orf54Q5BKX5 351 aa14.06□□□□□ -0.16
COL18A1-203ENST00000359759 OR8G5Q8NG78 346 aa14.06□□□□□ -0.16
COL18A1-203ENST00000359759 EFNB2P52799 333 aa14.06□□□□□ -0.16
COL18A1-203ENST00000359759 SSPNQ14714 243 aa14.06□□□□□ -0.16
COL18A1-203ENST00000359759 PAXXQ9BUH6 204 aa14.06□□□□□ -0.16
COL18A1-203ENST00000359759 TMEM38BQ9NVV0 291 aa14.06□□□□□ -0.16
COL18A1-203ENST00000359759 AHDC1Q5TGY3 1603 aaPredicted RBP14.06□□□□□ -0.16
COL18A1-203ENST00000359759 IGHV3OR16-12A0A075B7B8 117 aa14.06□□□□□ -0.16
COL18A1-203ENST00000359759 DEGS2Q6QHC5 323 aa14.06□□□□□ -0.16
COL18A1-203ENST00000359759 HIGD1AQ9Y241 93 aa14.06□□□□□ -0.16
COL18A1-203ENST00000359759 ATP6V0CP27449 155 aa14.05□□□□□ -0.16
COL18A1-203ENST00000359759 EIF3IQ13347 325 aaKnown RBP14.05□□□□□ -0.16
COL18A1-203ENST00000359759 STPG2Q8N412 459 aa14.05□□□□□ -0.16
COL18A1-203ENST00000359759 RAB1CQ92928 201 aa14.05□□□□□ -0.16
COL18A1-203ENST00000359759 CD3EP07766 207 aa14.05□□□□□ -0.16
COL18A1-203ENST00000359759 ROM1Q03395 351 aa14.05□□□□□ -0.16
COL18A1-203ENST00000359759 FAM131CQ96AQ9 280 aa14.05□□□□□ -0.16
COL18A1-203ENST00000359759 ALG14Q96F25 216 aa14.05□□□□□ -0.16
COL18A1-203ENST00000359759 OPN4Q9UHM6 478 aa14.05□□□□□ -0.16
COL18A1-203ENST00000359759 MPC1Q9Y5U8 109 aa14.05□□□□□ -0.16
COL18A1-203ENST00000359759 RUNX1Q01196 453 aa14.05□□□□□ -0.16
COL18A1-203ENST00000359759 CYB561D1Q8N8Q1 229 aa14.05□□□□□ -0.16
COL18A1-203ENST00000359759 WNT2BQ93097 391 aa14.05□□□□□ -0.16
COL18A1-203ENST00000359759 BRS3P32247 399 aa14.05□□□□□ -0.16
COL18A1-203ENST00000359759 HERPUD1Q15011 391 aa14.05□□□□□ -0.16
COL18A1-203ENST00000359759 CALHM1Q8IU99 346 aa14.05□□□□□ -0.16
COL18A1-203ENST00000359759 KLK13Q9UKR3 277 aa14.05□□□□□ -0.16
COL18A1-203ENST00000359759 TOPAZ1Q8N9V7 1692 aa14.05□□□□□ -0.16
COL18A1-203ENST00000359759 OGG1O15527 345 aa14.05□□□□□ -0.16
COL18A1-203ENST00000359759 FABP2P12104 132 aa14.05□□□□□ -0.16
COL18A1-203ENST00000359759 MFAP2P55001 183 aa14.05□□□□□ -0.16
COL18A1-203ENST00000359759 FAM3BP58499 235 aaPredicted RBP14.05□□□□□ -0.16
COL18A1-203ENST00000359759 HYAL1Q12794 435 aa14.05□□□□□ -0.16
COL18A1-203ENST00000359759 KLF9Q13886 244 aaPredicted RBP14.05□□□□□ -0.16
COL18A1-203ENST00000359759 OR6X1Q8NH79 312 aa14.05□□□□□ -0.16
COL18A1-203ENST00000359759 PARD6GQ9BYG4 376 aaPredicted RBP14.05□□□□□ -0.16
COL18A1-203ENST00000359759 SAP30LQ9HAJ7 183 aa14.05□□□□□ -0.16
COL18A1-203ENST00000359759 K7ERU9 68 aa14.04□□□□□ -0.16
COL18A1-203ENST00000359759 PARP11Q9NR21 331 aa14.04□□□□□ -0.16
COL18A1-203ENST00000359759 URB1O60287 2271 aaKnown RBP14.04□□□□□ -0.16
COL18A1-203ENST00000359759 TRAV8-7A0A075B6U6 113 aa14.04□□□□□ -0.16
COL18A1-203ENST00000359759 TMEM189A5PLL7 270 aa14.04□□□□□ -0.16
COL18A1-203ENST00000359759 NAAAQ02083 359 aa14.04□□□□□ -0.16
COL18A1-203ENST00000359759 ZNF738Q8NE65 137 aa14.04□□□□□ -0.16
COL18A1-203ENST00000359759 PRR7Q8TB68 274 aa14.04□□□□□ -0.16
COL18A1-203ENST00000359759 ZNF488Q96MN9 340 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms