RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 A6NJ64 397 aa4.34□□□□□ -1.71
ATXN3-202ENST00000359366 K7ENP7 123 aa4.34□□□□□ -1.71
ATXN3-202ENST00000359366 MFNGO00587 321 aa4.34□□□□□ -1.71
ATXN3-202ENST00000359366 SPDEFO95238 335 aa4.34□□□□□ -1.71
ATXN3-202ENST00000359366 CGAP01215 116 aa4.34□□□□□ -1.71
ATXN3-202ENST00000359366 CECR9P0C854 216 aa4.34□□□□□ -1.71
ATXN3-202ENST00000359366 NPY4RP50391 375 aa4.34□□□□□ -1.71
ATXN3-202ENST00000359366 FABP6P51161 128 aa4.34□□□□□ -1.71
ATXN3-202ENST00000359366 TAS2R19P59542 299 aa4.34□□□□□ -1.71
ATXN3-202ENST00000359366 ACTBP60709 375 aa4.34□□□□□ -1.71
ATXN3-202ENST00000359366 PPP1CBP62140 327 aa4.34□□□□□ -1.71
ATXN3-202ENST00000359366 ACTG1P63261 375 aa4.34□□□□□ -1.71
ATXN3-202ENST00000359366 DHODHQ02127 395 aa4.34□□□□□ -1.71
ATXN3-202ENST00000359366 TGFBR3Q03167 851 aa4.34□□□□□ -1.71
ATXN3-202ENST00000359366 FAM27E3Q08E93 113 aa4.34□□□□□ -1.71
ATXN3-202ENST00000359366 DAZAP2Q15038 168 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-202ENST00000359366 TBC1D28Q2M2D7 210 aa4.34□□□□□ -1.71
ATXN3-202ENST00000359366 NRN1LQ496H8 165 aa4.34□□□□□ -1.71
ATXN3-202ENST00000359366 AKIRIN2Q53H80 203 aa4.34□□□□□ -1.71
ATXN3-202ENST00000359366 INO80CQ6PI98 192 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-202ENST00000359366 VHLLQ6RSH7 139 aa4.34□□□□□ -1.71
ATXN3-202ENST00000359366 Q6ZSR3 168 aa4.34□□□□□ -1.71
ATXN3-202ENST00000359366 OR2W3Q7Z3T1 314 aa4.34□□□□□ -1.71
ATXN3-202ENST00000359366 ADAD2Q8NCV1 583 aaKnown RBP4.34□□□□□ -1.71
ATXN3-202ENST00000359366 OR56B1Q8NGI3 324 aa4.34□□□□□ -1.71
ATXN3-202ENST00000359366 OR1J1Q8NGS3 322 aa4.34□□□□□ -1.71
ATXN3-202ENST00000359366 OR13C8Q8NGS7 320 aa4.34□□□□□ -1.71
ATXN3-202ENST00000359366 OR5R1Q8NH85 324 aa4.34□□□□□ -1.71
ATXN3-202ENST00000359366 THAP6Q8TBB0 222 aa4.34□□□□□ -1.71
ATXN3-202ENST00000359366 SLC25A40Q8TBP6 338 aa4.34□□□□□ -1.71
ATXN3-202ENST00000359366 C2CD4CQ8TF44 421 aa4.34□□□□□ -1.71
ATXN3-202ENST00000359366 SNRNP40Q96DI7 357 aaKnown RBP4.34□□□□□ -1.71
ATXN3-202ENST00000359366 RHOVQ96L33 236 aa4.34□□□□□ -1.71
ATXN3-202ENST00000359366 Q96M66 194 aa4.34□□□□□ -1.71
ATXN3-202ENST00000359366 SPXQ9BT56 116 aa4.34□□□□□ -1.71
ATXN3-202ENST00000359366 URM1Q9BTM9 101 aaKnown RBP4.34□□□□□ -1.71
ATXN3-202ENST00000359366 KRTAP4-9Q9BYQ8 210 aa4.34□□□□□ -1.71
ATXN3-202ENST00000359366 PIGMQ9H3S5 423 aa4.34□□□□□ -1.71
ATXN3-202ENST00000359366 CDH20Q9HBT6 801 aa4.34□□□□□ -1.71
ATXN3-202ENST00000359366 AK3Q9UIJ7 227 aa4.34□□□□□ -1.71
ATXN3-202ENST00000359366 ST3GAL6Q9Y274 331 aa4.34□□□□□ -1.71
ATXN3-202ENST00000359366 VSIG4Q9Y279 399 aa4.34□□□□□ -1.71
ATXN3-202ENST00000359366 MSRB2Q9Y3D2 182 aa4.34□□□□□ -1.71
ATXN3-202ENST00000359366 TRAV39A0A0B4J263 110 aa4.34□□□□□ -1.72
ATXN3-202ENST00000359366 C7orf66A4D0T2 115 aa4.34□□□□□ -1.72
ATXN3-202ENST00000359366 CBY3A6NI87 242 aa4.34□□□□□ -1.72
ATXN3-202ENST00000359366 DHRS7CA6NNS2 312 aa4.34□□□□□ -1.72
ATXN3-202ENST00000359366 C1QTNF9BB2RNN3 333 aa4.34□□□□□ -1.72
ATXN3-202ENST00000359366 K7EP13 123 aa4.34□□□□□ -1.72
ATXN3-202ENST00000359366 SIAH2O43255 324 aa4.34□□□□□ -1.72
ATXN3-202ENST00000359366 OR7C1O76099 320 aaPredicted RBP4.34□□□□□ -1.72
ATXN3-202ENST00000359366 C1QTNF9P0C862 333 aa4.34□□□□□ -1.72
ATXN3-202ENST00000359366 AMY2BP19961 511 aa4.34□□□□□ -1.72
ATXN3-202ENST00000359366 AGAP20933 346 aa4.34□□□□□ -1.72
ATXN3-202ENST00000359366 TAGLN2P37802 199 aaKnown RBP4.34□□□□□ -1.72
ATXN3-202ENST00000359366 ALDH3B1P43353 468 aa4.34□□□□□ -1.72
ATXN3-202ENST00000359366 FUT6P51993 359 aa4.34□□□□□ -1.72
ATXN3-202ENST00000359366 ATP1B3P54709 279 aa4.34□□□□□ -1.72
ATXN3-202ENST00000359366 SELENOVP59797 346 aa4.34□□□□□ -1.72
ATXN3-202ENST00000359366 OPCMLQ14982 345 aa4.34□□□□□ -1.72
ATXN3-202ENST00000359366 PEA15Q15121 130 aa4.34□□□□□ -1.72
ATXN3-202ENST00000359366 RBMS2Q15434 407 aaKnown RBP4.34□□□□□ -1.72
ATXN3-202ENST00000359366 FAM74A1Q5RGS3 127 aa4.34□□□□□ -1.72
ATXN3-202ENST00000359366 Q6ZPA2 131 aa4.34□□□□□ -1.72
ATXN3-202ENST00000359366 LHFPL2Q6ZUX7 228 aa4.34□□□□□ -1.72
ATXN3-202ENST00000359366 WDR86Q86TI4 376 aa4.34□□□□□ -1.72
ATXN3-202ENST00000359366 ZDHHC23Q8IYP9 409 aa4.34□□□□□ -1.72
ATXN3-202ENST00000359366 MUC20Q8N307 709 aaPredicted RBP4.34□□□□□ -1.72
ATXN3-202ENST00000359366 TMEM229BQ8NBD8 167 aa4.34□□□□□ -1.72
ATXN3-202ENST00000359366 CSNK2A3Q8NEV1 391 aa4.34□□□□□ -1.72
ATXN3-202ENST00000359366 OR11H4Q8NGC9 324 aa4.34□□□□□ -1.72
ATXN3-202ENST00000359366 OR6K3Q8NGY3 331 aa4.34□□□□□ -1.72
ATXN3-202ENST00000359366 MARCH1Q8TCQ1 289 aa4.34□□□□□ -1.72
ATXN3-202ENST00000359366 RXFP4Q8TDU9 374 aa4.34□□□□□ -1.72
ATXN3-202ENST00000359366 C15orf40Q8WUR7 153 aa4.34□□□□□ -1.72
ATXN3-202ENST00000359366 NANOS1Q8WY41 292 aaKnown RBP4.34□□□□□ -1.72
ATXN3-202ENST00000359366 SPSB1Q96BD6 273 aa4.34□□□□□ -1.72
ATXN3-202ENST00000359366 NUDT11Q96G61 164 aa4.34□□□□□ -1.72
ATXN3-202ENST00000359366 PRRT1Q99946 306 aa4.34□□□□□ -1.72
ATXN3-202ENST00000359366 C7orf50Q9BRJ6 194 aaKnown RBP4.34□□□□□ -1.72
ATXN3-202ENST00000359366 RGCCQ9H4X1 137 aa4.34□□□□□ -1.72
ATXN3-202ENST00000359366 MSL2Q9HCI7 577 aa4.34□□□□□ -1.72
ATXN3-202ENST00000359366 PLSCR4Q9NRQ2 329 aa4.34□□□□□ -1.72
ATXN3-202ENST00000359366 MTCH1Q9NZJ7 389 aa4.34□□□□□ -1.72
ATXN3-202ENST00000359366 RALYQ9UKM9 306 aaKnown RBP4.34□□□□□ -1.72
ATXN3-202ENST00000359366 CARHSP1Q9Y2V2 147 aaKnown RBP4.34□□□□□ -1.72
ATXN3-202ENST00000359366 CACNA1BQ00975 2339 aa4.34□□□□□ -1.72
ATXN3-202ENST00000359366 OR14I1A6ND48 311 aa4.33□□□□□ -1.72
ATXN3-202ENST00000359366 MBD3L4A6NDZ8 208 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-202ENST00000359366 MBD3L3A6NE82 208 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-202ENST00000359366 NAP1L6A6NFF2 107 aa4.33□□□□□ -1.72
ATXN3-202ENST00000359366 MBD3L5A6NJ08 208 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-202ENST00000359366 FIGNL2A6NMB9 653 aa4.33□□□□□ -1.72
ATXN3-202ENST00000359366 FOXI3A8MTJ6 420 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-202ENST00000359366 M0R143 59 aa4.33□□□□□ -1.72
ATXN3-202ENST00000359366 CCSO14618 274 aa4.33□□□□□ -1.72
ATXN3-202ENST00000359366 IL2RAP01589 272 aa4.33□□□□□ -1.72
ATXN3-202ENST00000359366 GRPP07492 148 aa4.33□□□□□ -1.72
ATXN3-202ENST00000359366 CHRM2P08172 466 aa4.33□□□□□ -1.72
ATXN3-202ENST00000359366 MELTFP08582 738 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms